RNA–Protein interactions for RNA: ENST00000596232.1

TMEM147-208, Transcript of transmembrane protein 147, human

TSL 2

Gene TMEM147, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM147-208	ENST00000596232	SHANK3	Q9BYB0	1731 aa		27.94	■■■□□ 2.06
TMEM147-208	ENST00000596232	PTF1A	Q7RTS3	328 aa		27.92	■■■□□ 2.06
TMEM147-208	ENST00000596232	KAT6B	Q8WYB5	2073 aa		27.91	■■■□□ 2.06
TMEM147-208	ENST00000596232	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.91	■■■□□ 2.06
TMEM147-208	ENST00000596232	IGSF1	Q8N6C5	1336 aa		27.91	■■■□□ 2.06
TMEM147-208	ENST00000596232	ACSBG1	Q96GR2	724 aa		27.9	■■■□□ 2.06
TMEM147-208	ENST00000596232	EZH2	Q15910	746 aa	Known RBP	27.89	■■■□□ 2.06
TMEM147-208	ENST00000596232	IL13	P35225	146 aa		27.88	■■■□□ 2.05
TMEM147-208	ENST00000596232	CAMKK2	Q96RR4	588 aa		27.88	■■■□□ 2.05
TMEM147-208	ENST00000596232	KCNQ2	O43526	872 aa		27.87	■■■□□ 2.05
TMEM147-208	ENST00000596232	NHS	Q6T4R5	1651 aa		27.87	■■■□□ 2.05
TMEM147-208	ENST00000596232	DDX10	Q13206	875 aa	Known RBP	27.86	■■■□□ 2.05
TMEM147-208	ENST00000596232	PKD1L3	Q7Z443	1732 aa		27.86	■■■□□ 2.05
TMEM147-208	ENST00000596232	PCDH11X	Q9BZA7	1347 aa		27.84	■■■□□ 2.05
TMEM147-208	ENST00000596232	PCDH11Y	Q9BZA8	1340 aa		27.84	■■■□□ 2.05
TMEM147-208	ENST00000596232	SPG7	Q9UQ90	795 aa		27.83	■■■□□ 2.05
TMEM147-208	ENST00000596232	PARD3	Q8TEW0	1356 aa		27.83	■■■□□ 2.05
TMEM147-208	ENST00000596232	PLSCR1	O15162	318 aa		27.81	■■■□□ 2.04
TMEM147-208	ENST00000596232	CYP27B1	O15528	508 aa		27.81	■■■□□ 2.04
TMEM147-208	ENST00000596232	DIAPH1	O60610	1272 aa	Known RBP	27.81	■■■□□ 2.04
TMEM147-208	ENST00000596232	AEBP1	Q8IUX7	1158 aa		27.81	■■■□□ 2.04
TMEM147-208	ENST00000596232	DOT1L	Q8TEK3	1739 aa		27.81	■■■□□ 2.04
TMEM147-208	ENST00000596232	PPP2R1A	P30153	589 aa		27.8	■■■□□ 2.04
TMEM147-208	ENST00000596232	SULT6B1	Q6IMI4	303 aa		27.8	■■■□□ 2.04
TMEM147-208	ENST00000596232	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.8	■■■□□ 2.04
TMEM147-208	ENST00000596232	RREB1	Q92766	1687 aa		27.79	■■■□□ 2.04
TMEM147-208	ENST00000596232	BTAF1	O14981	1849 aa		27.78	■■■□□ 2.04
TMEM147-208	ENST00000596232	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.78	■■■□□ 2.04
TMEM147-208	ENST00000596232	RGPD4	Q7Z3J3	1758 aa		27.78	■■■□□ 2.04
TMEM147-208	ENST00000596232	COL3A1	P02461	1466 aa	Predicted RBP	27.78	■■■□□ 2.04
TMEM147-208	ENST00000596232	PRIM1	P49642	420 aa	Known RBP	27.77	■■■□□ 2.04
TMEM147-208	ENST00000596232	PLEKHG2	Q9H7P9	1386 aa		27.76	■■■□□ 2.03
TMEM147-208	ENST00000596232	SYTL4	Q96C24	671 aa	Predicted RBP	27.76	■■■□□ 2.03
TMEM147-208	ENST00000596232	KDR	P35968	1356 aa		27.75	■■■□□ 2.03
TMEM147-208	ENST00000596232	NUP188	Q5SRE5	1749 aa		27.75	■■■□□ 2.03
TMEM147-208	ENST00000596232	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.74	■■■□□ 2.03
TMEM147-208	ENST00000596232	CFAP53	Q96M91	514 aa		27.74	■■■□□ 2.03
TMEM147-208	ENST00000596232	HMOX1	P09601	288 aa		27.73	■■■□□ 2.03
TMEM147-208	ENST00000596232	IFNL2	Q8IZJ0	200 aa		27.73	■■■□□ 2.03
TMEM147-208	ENST00000596232	PHKG2	P15735	406 aa		27.72	■■■□□ 2.03
TMEM147-208	ENST00000596232	NKX1-1	Q15270	411 aa	Predicted RBP	27.72	■■■□□ 2.03
TMEM147-208	ENST00000596232	PROM2	Q8N271	834 aa		27.71	■■■□□ 2.03
TMEM147-208	ENST00000596232	TOGARAM1	Q9Y4F4	1720 aa		27.7	■■■□□ 2.03
TMEM147-208	ENST00000596232	U2SURP	O15042	1029 aa	Known RBP	27.7	■■■□□ 2.02
TMEM147-208	ENST00000596232	TXNRD1	Q16881	649 aa		27.7	■■■□□ 2.02
TMEM147-208	ENST00000596232	AMOT	Q4VCS5	1084 aa		27.7	■■■□□ 2.02
TMEM147-208	ENST00000596232	PSD	A5PKW4	1024 aa	Predicted RBP	27.68	■■■□□ 2.02
TMEM147-208	ENST00000596232	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.68	■■■□□ 2.02
TMEM147-208	ENST00000596232	ITGB4	P16144	1822 aa		27.67	■■■□□ 2.02
TMEM147-208	ENST00000596232	NBPF14	Q5TI25	921 aa		27.66	■■■□□ 2.02
TMEM147-208	ENST00000596232	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.65	■■■□□ 2.02
TMEM147-208	ENST00000596232	R3HDM1	Q15032	1099 aa	Known RBP	27.65	■■■□□ 2.02
TMEM147-208	ENST00000596232	RALBP1	Q15311	655 aa		27.65	■■■□□ 2.02
TMEM147-208	ENST00000596232	MPRIP	Q6WCQ1	1025 aa		27.64	■■■□□ 2.02
TMEM147-208	ENST00000596232	NUDC	Q9Y266	331 aa		27.64	■■■□□ 2.02
TMEM147-208	ENST00000596232	C1orf141	Q5JVX7	400 aa		27.63	■■■□□ 2.01
TMEM147-208	ENST00000596232	HSP90AB1	P08238	724 aa	Known RBP	27.62	■■■□□ 2.01
TMEM147-208	ENST00000596232	PIGB	Q92521	554 aa		27.6	■■■□□ 2.01
TMEM147-208	ENST00000596232	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.6	■■■□□ 2.01
TMEM147-208	ENST00000596232	LY75	O60449	1722 aa		27.59	■■■□□ 2.01
TMEM147-208	ENST00000596232	DCAF5	Q96JK2	942 aa		27.59	■■■□□ 2.01
TMEM147-208	ENST00000596232	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.58	■■■□□ 2.01
TMEM147-208	ENST00000596232	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.58	■■■□□ 2.01
TMEM147-208	ENST00000596232	LRRC4B	Q9NT99	713 aa		27.58	■■■□□ 2.01
TMEM147-208	ENST00000596232	TMOD3	Q9NYL9	352 aa		27.58	■■■□□ 2.01
TMEM147-208	ENST00000596232	KDM6A	O15550	1401 aa	Predicted RBP	27.58	■■■□□ 2
TMEM147-208	ENST00000596232	MTHFSD	Q2M296	383 aa	Known RBP	27.57	■■■□□ 2
TMEM147-208	ENST00000596232	AKAP4	Q5JQC9	854 aa		27.57	■■■□□ 2
TMEM147-208	ENST00000596232	SLC27A3	Q5K4L6	730 aa		27.57	■■■□□ 2
TMEM147-208	ENST00000596232	ERVV-2	B6SEH9	535 aa		27.55	■■■□□ 2
TMEM147-208	ENST00000596232	RSPH6A	Q9H0K4	717 aa		27.55	■■■□□ 2
TMEM147-208	ENST00000596232	PRKAR2B	P31323	418 aa		27.54	■■■□□ 2
TMEM147-208	ENST00000596232	KCNQ4	P56696	695 aa		27.54	■■■□□ 2
TMEM147-208	ENST00000596232	PALLD	Q8WX93	1383 aa		27.54	■■■□□ 2
TMEM147-208	ENST00000596232	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.54	■■■□□ 2
TMEM147-208	ENST00000596232	STK32B	Q9NY57	414 aa		27.54	■■■□□ 2
TMEM147-208	ENST00000596232	PAPPA	Q13219	1627 aa		27.53	■■■□□ 2
TMEM147-208	ENST00000596232	SMARCC1	Q92922	1105 aa	Predicted RBP	27.53	■■■□□ 2
TMEM147-208	ENST00000596232	CCNL1	Q9UK58	526 aa	Predicted RBP	27.53	■■■□□ 2
TMEM147-208	ENST00000596232	SCN11A	Q9UI33	1791 aa		27.52	■■■□□ 2
TMEM147-208	ENST00000596232	CABP4	P57796	275 aa		27.51	■■□□□ 1.99
TMEM147-208	ENST00000596232	SLC15A2	Q16348	729 aa		27.51	■■□□□ 1.99
TMEM147-208	ENST00000596232	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.51	■■□□□ 1.99
TMEM147-208	ENST00000596232	FCHSD2	O94868	740 aa		27.5	■■□□□ 1.99
TMEM147-208	ENST00000596232	ASAP1	Q9ULH1	1129 aa		27.5	■■□□□ 1.99
TMEM147-208	ENST00000596232	GAS2L2	Q8NHY3	880 aa		27.49	■■□□□ 1.99
TMEM147-208	ENST00000596232	PHACTR3	Q96KR7	559 aa		27.49	■■□□□ 1.99
TMEM147-208	ENST00000596232	VIRMA	Q69YN4	1812 aa	Known RBP	27.48	■■□□□ 1.99
TMEM147-208	ENST00000596232	LGR6	Q9HBX8	967 aa		27.48	■■□□□ 1.99
TMEM147-208	ENST00000596232	ATG3	Q9NT62	314 aa		27.48	■■□□□ 1.99
TMEM147-208	ENST00000596232	RNMT	O43148	476 aa	Known RBP	27.47	■■□□□ 1.99
TMEM147-208	ENST00000596232	ZNF827	Q17R98	1081 aa		27.47	■■□□□ 1.99
TMEM147-208	ENST00000596232	NFATC2IP	Q8NCF5	419 aa		27.46	■■□□□ 1.99
TMEM147-208	ENST00000596232	AKT1S1	Q96B36	256 aa		27.45	■■□□□ 1.98
TMEM147-208	ENST00000596232	MAP3K5	Q99683	1374 aa		27.44	■■□□□ 1.98
TMEM147-208	ENST00000596232	ADAMTS7	Q9UKP4	1686 aa		27.43	■■□□□ 1.98
TMEM147-208	ENST00000596232	LOC102724428	A0A0B4J2F2	783 aa		27.43	■■□□□ 1.98
TMEM147-208	ENST00000596232	GNAT3	A8MTJ3	354 aa		27.43	■■□□□ 1.98
TMEM147-208	ENST00000596232	SIK1	P57059	783 aa		27.43	■■□□□ 1.98
TMEM147-208	ENST00000596232	TAF1L	Q8IZX4	1826 aa		27.42	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms