RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 SCAPERQ9BY12 1400 aa9.46□□□□□ -0.9
LDLRAD4-216ENST00000592657 DENND4BO75064 1496 aaPredicted RBP9.46□□□□□ -0.9
LDLRAD4-216ENST00000592657 TET3O43151 1660 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 SPHKAPQ2M3C7 1700 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 EFCAB2Q5VUJ9 269 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 SETD5Q9C0A6 1442 aa9.45□□□□□ -0.9
LDLRAD4-216ENST00000592657 CFAP65Q6ZU64 1925 aaKnown RBP9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 GPR37O15354 613 aa9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 ZNF777Q9ULD5 760 aaPredicted RBP9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 ERBINQ96RT1 1412 aa9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 E9PCH4 1651 aa9.44□□□□□ -0.9
LDLRAD4-216ENST00000592657 CAMSAP1Q5T5Y3 1602 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 KIF15Q9NS87 1388 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 CD46P15529 392 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 WNT7BP56706 349 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 USP46P62068 366 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 FAM69CQ0P6D2 419 aa9.43□□□□□ -0.9
LDLRAD4-216ENST00000592657 FER1L4A9Z1Z3 1794 aa9.42□□□□□ -0.9
LDLRAD4-216ENST00000592657 ANKRD30AQ9BXX3 1397 aa9.42□□□□□ -0.9
LDLRAD4-216ENST00000592657 ITGAEP38570 1179 aa9.42□□□□□ -0.9
LDLRAD4-216ENST00000592657 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
LDLRAD4-216ENST00000592657 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
LDLRAD4-216ENST00000592657 ANKRD50Q9ULJ7 1429 aa9.4□□□□□ -0.9
LDLRAD4-216ENST00000592657 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
LDLRAD4-216ENST00000592657 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.9
LDLRAD4-216ENST00000592657 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
LDLRAD4-216ENST00000592657 EHBP1Q8NDI1 1231 aa9.4□□□□□ -0.9
LDLRAD4-216ENST00000592657 PZPP20742 1482 aa9.4□□□□□ -0.91
LDLRAD4-216ENST00000592657 MROH2AA6NES4 1674 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 MYO5BQ9ULV0 1848 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 EFCAB6Q5THR3 1501 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 FAM135AQ9P2D6 1515 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 A2MP01023 1474 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
LDLRAD4-216ENST00000592657 AGLP35573 1532 aa9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 SKOR1P84550 965 aa9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 PREX1Q8TCU6 1659 aa9.38□□□□□ -0.91
LDLRAD4-216ENST00000592657 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
LDLRAD4-216ENST00000592657 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
LDLRAD4-216ENST00000592657 HLA-CQ95604 372 aa9.37□□□□□ -0.91
LDLRAD4-216ENST00000592657 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
LDLRAD4-216ENST00000592657 KIF1BO60333 1816 aa9.37□□□□□ -0.91
LDLRAD4-216ENST00000592657 SPAG9O60271 1321 aaKnown RBP9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 JUNDP17535 347 aa9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 IFT172Q9UG01 1749 aa9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 ABCC3O15438 1527 aa9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 LMTK2Q8IWU2 1503 aa9.36□□□□□ -0.91
LDLRAD4-216ENST00000592657 IRF6O14896 467 aa9.35□□□□□ -0.91
LDLRAD4-216ENST00000592657 HOXA2O43364 376 aa9.35□□□□□ -0.91
LDLRAD4-216ENST00000592657 IRF7Q92985 503 aa9.35□□□□□ -0.91
LDLRAD4-216ENST00000592657 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
LDLRAD4-216ENST00000592657 RRP7BPQ9NSQ0 103 aa9.35□□□□□ -0.91
LDLRAD4-216ENST00000592657 AFAP1Q8N556 730 aa9.34□□□□□ -0.91
LDLRAD4-216ENST00000592657 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
LDLRAD4-216ENST00000592657 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 CLTCL1P53675 1640 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 ATP10AO60312 1499 aa9.33□□□□□ -0.92
LDLRAD4-216ENST00000592657 C3P01024 1663 aa9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 TRPM2O94759 1503 aa9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 ZSCAN1Q8NBB4 408 aa9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 RIMS1Q86UR5 1692 aaKnown RBP9.32□□□□□ -0.92
LDLRAD4-216ENST00000592657 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 BMP1P13497 986 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 HRCP23327 699 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 RETREG3Q86VR2 466 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 DHX29Q7Z478 1369 aaKnown RBP9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 ADAMTSL3P82987 1691 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 MADDQ8WXG6 1647 aa9.31□□□□□ -0.92
LDLRAD4-216ENST00000592657 CLCN1P35523 988 aa9.3□□□□□ -0.92
LDLRAD4-216ENST00000592657 GMPRP36959 345 aa9.3□□□□□ -0.92
LDLRAD4-216ENST00000592657 PTCRAQ6ISU1 281 aaPredicted RBP9.3□□□□□ -0.92
LDLRAD4-216ENST00000592657 PPLO60437 1756 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 SYNMO15061 1565 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 VEGFBP49765 207 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 NPAS3Q8IXF0 933 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 ARXQ96QS3 562 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
LDLRAD4-216ENST00000592657 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
LDLRAD4-216ENST00000592657 SIAH2O43255 324 aa9.28□□□□□ -0.92
LDLRAD4-216ENST00000592657 MS4A1P11836 297 aa9.28□□□□□ -0.92
LDLRAD4-216ENST00000592657 KDM5AP29375 1690 aaKnown RBP9.27□□□□□ -0.93
LDLRAD4-216ENST00000592657 FDX1P10109 184 aa9.27□□□□□ -0.93
LDLRAD4-216ENST00000592657 SCARF1Q14162 830 aa9.27□□□□□ -0.93
LDLRAD4-216ENST00000592657 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms