RNA–Protein interactions for RNA: ENST00000592083.5

ERCC1-214, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-214ENST00000592083 POLD1P28340 1107 aa20.95■□□□□ 0.94
ERCC1-214ENST00000592083 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
ERCC1-214ENST00000592083 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
ERCC1-214ENST00000592083 FBLN1P23142 703 aa20.94■□□□□ 0.94
ERCC1-214ENST00000592083 TFCP2L1Q9NZI6 479 aa20.94■□□□□ 0.94
ERCC1-214ENST00000592083 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-214ENST00000592083 SLC27A3Q5K4L6 730 aa20.92■□□□□ 0.94
ERCC1-214ENST00000592083 IFFO2Q5TF58 517 aa20.92■□□□□ 0.94
ERCC1-214ENST00000592083 SYTL4Q96C24 671 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-214ENST00000592083 COG3Q96JB2 828 aa20.92■□□□□ 0.94
ERCC1-214ENST00000592083 PRIM1P49642 420 aaKnown RBP20.91■□□□□ 0.94
ERCC1-214ENST00000592083 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
ERCC1-214ENST00000592083 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
ERCC1-214ENST00000592083 TUBGCP6Q96RT7 1819 aa20.91■□□□□ 0.94
ERCC1-214ENST00000592083 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
ERCC1-214ENST00000592083 YBX3P16989 372 aaKnown RBP eCLIP20.9■□□□□ 0.943e-8■□□□□ 9.1
ERCC1-214ENST00000592083 QSER1Q2KHR3 1735 aa20.9■□□□□ 0.94
ERCC1-214ENST00000592083 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
ERCC1-214ENST00000592083 SHANK3Q9BYB0 1731 aa20.88■□□□□ 0.93
ERCC1-214ENST00000592083 FYB1O15117 783 aa20.88■□□□□ 0.93
ERCC1-214ENST00000592083 MSH5O43196 834 aa20.87■□□□□ 0.93
ERCC1-214ENST00000592083 IP6K1Q92551 441 aa20.87■□□□□ 0.93
ERCC1-214ENST00000592083 MAP3K19Q56UN5 1328 aa20.86■□□□□ 0.93
ERCC1-214ENST00000592083 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
ERCC1-214ENST00000592083 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
ERCC1-214ENST00000592083 COL23A1Q86Y22 540 aaPredicted RBP20.85■□□□□ 0.93
ERCC1-214ENST00000592083 AMPHP49418 695 aa20.84■□□□□ 0.93
ERCC1-214ENST00000592083 HSPA5P11021 654 aaKnown RBP20.83■□□□□ 0.93
ERCC1-214ENST00000592083 HOXC9P31274 260 aa20.83■□□□□ 0.93
ERCC1-214ENST00000592083 RRS1Q15050 365 aaKnown RBP20.83■□□□□ 0.93
ERCC1-214ENST00000592083 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
ERCC1-214ENST00000592083 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
ERCC1-214ENST00000592083 CEP350Q5VT06 3117 aa20.82■□□□□ 0.92
ERCC1-214ENST00000592083 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
ERCC1-214ENST00000592083 LY75O60449 1722 aa20.82■□□□□ 0.92
ERCC1-214ENST00000592083 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
ERCC1-214ENST00000592083 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
ERCC1-214ENST00000592083 ZCRB1Q8TBF4 217 aaKnown RBP20.81■□□□□ 0.92
ERCC1-214ENST00000592083 NSD2O96028 1365 aa20.81■□□□□ 0.92
ERCC1-214ENST00000592083 DOT1LQ8TEK3 1739 aa20.81■□□□□ 0.92
ERCC1-214ENST00000592083 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
ERCC1-214ENST00000592083 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
ERCC1-214ENST00000592083 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
ERCC1-214ENST00000592083 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-214ENST00000592083 FAM208AQ9UK61 1670 aaKnown RBP20.74■□□□□ 0.91
ERCC1-214ENST00000592083 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
ERCC1-214ENST00000592083 MEGF6O75095 1541 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 GPBP1L1Q9HC44 474 aaPredicted RBP20.73■□□□□ 0.91
ERCC1-214ENST00000592083 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
ERCC1-214ENST00000592083 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
ERCC1-214ENST00000592083 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
ERCC1-214ENST00000592083 EMILIN1Q9Y6C2 1016 aa20.71■□□□□ 0.91
ERCC1-214ENST00000592083 CGNL1Q0VF96 1302 aa20.7■□□□□ 0.9
ERCC1-214ENST00000592083 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
ERCC1-214ENST00000592083 PANK3Q9H999 370 aa20.69■□□□□ 0.9
ERCC1-214ENST00000592083 HSPA6P17066 643 aa20.68■□□□□ 0.9
ERCC1-214ENST00000592083 MPRIPQ6WCQ1 1025 aa20.68■□□□□ 0.9
ERCC1-214ENST00000592083 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
ERCC1-214ENST00000592083 INSRP06213 1382 aa20.68■□□□□ 0.9
ERCC1-214ENST00000592083 FLT4P35916 1363 aa20.68■□□□□ 0.9
ERCC1-214ENST00000592083 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
ERCC1-214ENST00000592083 TNNT2P45379 298 aaPredicted RBP20.67■□□□□ 0.9
ERCC1-214ENST00000592083 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
ERCC1-214ENST00000592083 C5P01031 1676 aa20.67■□□□□ 0.9
ERCC1-214ENST00000592083 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
ERCC1-214ENST00000592083 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
ERCC1-214ENST00000592083 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.9
ERCC1-214ENST00000592083 ADCY9O60503 1353 aa20.64■□□□□ 0.89
ERCC1-214ENST00000592083 KIF24Q5T7B8 1368 aa20.64■□□□□ 0.89
ERCC1-214ENST00000592083 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
ERCC1-214ENST00000592083 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
ERCC1-214ENST00000592083 PHF14O94880 888 aa20.63■□□□□ 0.89
ERCC1-214ENST00000592083 IGSF1Q8N6C5 1336 aa20.62■□□□□ 0.89
ERCC1-214ENST00000592083 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
ERCC1-214ENST00000592083 CYP27B1O15528 508 aa20.61■□□□□ 0.89
ERCC1-214ENST00000592083 ITGB4P16144 1822 aa20.6■□□□□ 0.89
ERCC1-214ENST00000592083 AK7Q96M32 723 aa20.6■□□□□ 0.89
ERCC1-214ENST00000592083 ANKRD26Q9UPS8 1709 aa20.6■□□□□ 0.89
ERCC1-214ENST00000592083 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
ERCC1-214ENST00000592083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
ERCC1-214ENST00000592083 KIF3CO14782 793 aa20.59■□□□□ 0.89
ERCC1-214ENST00000592083 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
ERCC1-214ENST00000592083 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
ERCC1-214ENST00000592083 PIGBQ92521 554 aa20.58■□□□□ 0.89
ERCC1-214ENST00000592083 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.88
ERCC1-214ENST00000592083 PCDH11XQ9BZA7 1347 aa20.57■□□□□ 0.88
ERCC1-214ENST00000592083 PCDH11YQ9BZA8 1340 aa20.57■□□□□ 0.88
ERCC1-214ENST00000592083 TOGARAM1Q9Y4F4 1720 aa20.57■□□□□ 0.88
ERCC1-214ENST00000592083 SMARCC1Q92922 1105 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-214ENST00000592083 EYA1Q99502 592 aa20.56■□□□□ 0.88
ERCC1-214ENST00000592083 LINC00116Q8NCU8 138 aa20.55■□□□□ 0.88
ERCC1-214ENST00000592083 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
ERCC1-214ENST00000592083 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
ERCC1-214ENST00000592083 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
ERCC1-214ENST00000592083 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
ERCC1-214ENST00000592083 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms