RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 RGS3P49796 1198 aa14.43□□□□□ -0.1
TPM4-213ENST00000591226 MTHFSDQ2M296 383 aaKnown RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 XPCQ01831 940 aaPredicted RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
TPM4-213ENST00000591226 MRPL50Q8N5N7 158 aaKnown RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
TPM4-213ENST00000591226 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
TPM4-213ENST00000591226 RTL1A6NKG5 1358 aa14.42□□□□□ -0.1
TPM4-213ENST00000591226 DDX19BQ9UMR2 479 aa14.41□□□□□ -0.1
TPM4-213ENST00000591226 CRB1P82279 1406 aa14.41□□□□□ -0.1
TPM4-213ENST00000591226 CHL1O00533 1208 aa14.4□□□□□ -0.1
TPM4-213ENST00000591226 NPM2Q86SE8 214 aaKnown RBP14.4□□□□□ -0.1
TPM4-213ENST00000591226 EIF5BO60841 1220 aaKnown RBP14.4□□□□□ -0.1
TPM4-213ENST00000591226 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
TPM4-213ENST00000591226 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
TPM4-213ENST00000591226 ANP32AP39687 249 aaKnown RBP14.39□□□□□ -0.11
TPM4-213ENST00000591226 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
TPM4-213ENST00000591226 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
TPM4-213ENST00000591226 C19orf44Q9H6X5 657 aa14.39□□□□□ -0.11
TPM4-213ENST00000591226 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
TPM4-213ENST00000591226 IP6K1Q92551 441 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
TPM4-213ENST00000591226 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
TPM4-213ENST00000591226 TRPM3Q9HCF6 1732 aaPredicted RBP14.38□□□□□ -0.11
TPM4-213ENST00000591226 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 HSPA2P54652 639 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 USHBP1Q8N6Y0 703 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 KIF1AQ12756 1690 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 TMEM94Q12767 1356 aa14.38□□□□□ -0.11
TPM4-213ENST00000591226 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
TPM4-213ENST00000591226 SLIT3O75094 1523 aa14.37□□□□□ -0.11
TPM4-213ENST00000591226 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
TPM4-213ENST00000591226 ZBTB40Q9NUA8 1239 aa14.37□□□□□ -0.11
TPM4-213ENST00000591226 MIS18AQ9NYP9 233 aa14.37□□□□□ -0.11
TPM4-213ENST00000591226 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
TPM4-213ENST00000591226 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
TPM4-213ENST00000591226 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
TPM4-213ENST00000591226 LRRC37A3O60309 1634 aa14.36□□□□□ -0.11
TPM4-213ENST00000591226 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
TPM4-213ENST00000591226 C8orf34Q49A92 452 aa14.36□□□□□ -0.11
TPM4-213ENST00000591226 MST1RQ04912 1400 aa14.35□□□□□ -0.11
TPM4-213ENST00000591226 GCP02774 474 aa14.35□□□□□ -0.11
TPM4-213ENST00000591226 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
TPM4-213ENST00000591226 ABCC4O15439 1325 aa14.35□□□□□ -0.11
TPM4-213ENST00000591226 MSH6P52701 1360 aa14.35□□□□□ -0.11
TPM4-213ENST00000591226 ATF3P18847 181 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 NBPF6Q5VWK0 638 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 NBPF4Q96M43 638 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 USP19O94966 1318 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
TPM4-213ENST00000591226 RGPD2P0DJD1 1756 aa14.34□□□□□ -0.11
TPM4-213ENST00000591226 MAP3K5Q99683 1374 aa14.33□□□□□ -0.11
TPM4-213ENST00000591226 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
TPM4-213ENST00000591226 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.12
TPM4-213ENST00000591226 IPO9Q96P70 1041 aaKnown RBP14.33□□□□□ -0.12
TPM4-213ENST00000591226 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
TPM4-213ENST00000591226 DCCP43146 1447 aa14.32□□□□□ -0.12
TPM4-213ENST00000591226 ZBTB7BO15156 539 aaPredicted RBP14.32□□□□□ -0.12
TPM4-213ENST00000591226 LRRC59Q96AG4 307 aaKnown RBP14.32□□□□□ -0.12
TPM4-213ENST00000591226 ALS2Q96Q42 1657 aa14.31□□□□□ -0.12
TPM4-213ENST00000591226 IL17REQ8NFR9 667 aa14.31□□□□□ -0.12
TPM4-213ENST00000591226 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
TPM4-213ENST00000591226 NCOA3Q9Y6Q9 1424 aa14.3□□□□□ -0.12
TPM4-213ENST00000591226 RGS12O14924 1447 aa14.3□□□□□ -0.12
TPM4-213ENST00000591226 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
TPM4-213ENST00000591226 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
TPM4-213ENST00000591226 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
TPM4-213ENST00000591226 MED1Q15648 1581 aaPredicted RBP14.29□□□□□ -0.12
TPM4-213ENST00000591226 LMTK3Q96Q04 1460 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
TPM4-213ENST00000591226 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 AXIN2Q9Y2T1 843 aa14.28□□□□□ -0.12
TPM4-213ENST00000591226 NCAPD2Q15021 1401 aa14.27□□□□□ -0.13
TPM4-213ENST00000591226 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.13
TPM4-213ENST00000591226 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
TPM4-213ENST00000591226 STRCQ7RTU9 1775 aa14.26□□□□□ -0.13
TPM4-213ENST00000591226 RGPD5Q99666 1765 aa14.26□□□□□ -0.13
TPM4-213ENST00000591226 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
TPM4-213ENST00000591226 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
TPM4-213ENST00000591226 PTPRCP08575 1304 aa14.26□□□□□ -0.13
TPM4-213ENST00000591226 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
TPM4-213ENST00000591226 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
TPM4-213ENST00000591226 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
TPM4-213ENST00000591226 G2E3Q7L622 706 aa14.25□□□□□ -0.13
TPM4-213ENST00000591226 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
TPM4-213ENST00000591226 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
TPM4-213ENST00000591226 FAM208AQ9UK61 1670 aaKnown RBP14.24□□□□□ -0.13
TPM4-213ENST00000591226 PXDNQ92626 1479 aa14.24□□□□□ -0.13
TPM4-213ENST00000591226 ZNF530Q6P9A1 599 aaPredicted RBP14.24□□□□□ -0.13
TPM4-213ENST00000591226 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
TPM4-213ENST00000591226 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
TPM4-213ENST00000591226 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms