RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 ARID3AQ99856 593 aa23.8■■□□□ 1.4
MBD3-207ENST00000590550 TTC21BQ7Z4L5 1316 aa23.8■■□□□ 1.4
MBD3-207ENST00000590550 FOXO3O43524 673 aa23.79■■□□□ 1.4
MBD3-207ENST00000590550 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
MBD3-207ENST00000590550 REREQ9P2R6 1566 aa23.77■■□□□ 1.4
MBD3-207ENST00000590550 MON2Q7Z3U7 1717 aa23.77■■□□□ 1.39
MBD3-207ENST00000590550 SMARCA5O60264 1052 aaPredicted RBP23.76■■□□□ 1.39
MBD3-207ENST00000590550 PLEKHM2Q8IWE5 1019 aa23.76■■□□□ 1.39
MBD3-207ENST00000590550 KNDC1Q76NI1 1749 aa23.76■■□□□ 1.39
MBD3-207ENST00000590550 DDIT3P35638 169 aa23.75■■□□□ 1.39
MBD3-207ENST00000590550 SNX21Q969T3 373 aa23.75■■□□□ 1.39
MBD3-207ENST00000590550 LTKP29376 864 aa23.75■■□□□ 1.39
MBD3-207ENST00000590550 GAS2L3Q86XJ1 694 aa23.75■■□□□ 1.39
MBD3-207ENST00000590550 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
MBD3-207ENST00000590550 C3P01024 1663 aa23.75■■□□□ 1.39
MBD3-207ENST00000590550 MEIS3Q99687 375 aa23.74■■□□□ 1.39
MBD3-207ENST00000590550 FAM13BQ9NYF5 915 aa23.74■■□□□ 1.39
MBD3-207ENST00000590550 CHL1O00533 1208 aa23.74■■□□□ 1.39
MBD3-207ENST00000590550 TNRQ92752 1358 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 NCOA3Q9Y6Q9 1424 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 DCTPP1Q9H773 170 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 CDC45O75419 566 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
MBD3-207ENST00000590550 HDGFP51858 240 aaKnown RBP23.73■■□□□ 1.39
MBD3-207ENST00000590550 MSH6P52701 1360 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 TMEM2Q9UHN6 1383 aa23.73■■□□□ 1.39
MBD3-207ENST00000590550 TECPR2O15040 1411 aa23.72■■□□□ 1.39
MBD3-207ENST00000590550 INTS3Q68E01 1043 aaKnown RBP23.72■■□□□ 1.39
MBD3-207ENST00000590550 RGS12O14924 1447 aa23.72■■□□□ 1.39
MBD3-207ENST00000590550 ITSN1Q15811 1721 aa23.71■■□□□ 1.39
MBD3-207ENST00000590550 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
MBD3-207ENST00000590550 F6X3S4 739 aa23.71■■□□□ 1.39
MBD3-207ENST00000590550 SLC4A10Q6U841 1118 aa23.7■■□□□ 1.39
MBD3-207ENST00000590550 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
MBD3-207ENST00000590550 CEP85Q6P2H3 762 aa23.7■■□□□ 1.38
MBD3-207ENST00000590550 G2E3Q7L622 706 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 SIRT1Q96EB6 747 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 MAP3K19Q56UN5 1328 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 ADAMTS13Q76LX8 1427 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 ANKRD44Q8N8A2 993 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 ATP10DQ9P241 1426 aa23.69■■□□□ 1.38
MBD3-207ENST00000590550 K7ELQ4 463 aaPredicted RBP23.68■■□□□ 1.38
MBD3-207ENST00000590550 TTC22Q5TAA0 569 aa23.68■■□□□ 1.38
MBD3-207ENST00000590550 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.68■■□□□ 1.38
MBD3-207ENST00000590550 DDX11L8A8MPP1 907 aa23.68■■□□□ 1.38
MBD3-207ENST00000590550 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
MBD3-207ENST00000590550 OVOS2A0A0J9YW53 1432 aa23.67■■□□□ 1.38
MBD3-207ENST00000590550 OVOS2Q6IE36 1432 aa23.67■■□□□ 1.38
MBD3-207ENST00000590550 USP6P35125 1406 aa23.66■■□□□ 1.38
MBD3-207ENST00000590550 PEAK1Q9H792 1746 aa23.66■■□□□ 1.38
MBD3-207ENST00000590550 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
MBD3-207ENST00000590550 NECTIN2Q92692 538 aa23.65■■□□□ 1.38
MBD3-207ENST00000590550 NUTM2GQ5VZR2 741 aa23.65■■□□□ 1.38
MBD3-207ENST00000590550 PLEKHG3A1L390 1219 aa23.64■■□□□ 1.38
MBD3-207ENST00000590550 SSFA2P28290 1259 aa23.64■■□□□ 1.38
MBD3-207ENST00000590550 RAB3GAP1Q15042 981 aa23.64■■□□□ 1.38
MBD3-207ENST00000590550 TSPYL4Q9UJ04 414 aa23.64■■□□□ 1.38
MBD3-207ENST00000590550 SDSP20132 328 aa23.63■■□□□ 1.37
MBD3-207ENST00000590550 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
MBD3-207ENST00000590550 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
MBD3-207ENST00000590550 R3HCC1Q9Y3T6 440 aaKnown RBP23.63■■□□□ 1.37
MBD3-207ENST00000590550 CRB1P82279 1406 aa23.62■■□□□ 1.37
MBD3-207ENST00000590550 TSHZ3Q63HK5 1081 aa23.62■■□□□ 1.37
MBD3-207ENST00000590550 RPAP2Q8IXW5 612 aaPredicted RBP23.62■■□□□ 1.37
MBD3-207ENST00000590550 RTF1Q92541 710 aaKnown RBP23.62■■□□□ 1.37
MBD3-207ENST00000590550 PTPRUQ92729 1446 aa23.61■■□□□ 1.37
MBD3-207ENST00000590550 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
MBD3-207ENST00000590550 NGDNQ8NEJ9 315 aaKnown RBP23.61■■□□□ 1.37
MBD3-207ENST00000590550 PRDM10Q9NQV6 1147 aa23.61■■□□□ 1.37
MBD3-207ENST00000590550 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
MBD3-207ENST00000590550 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
MBD3-207ENST00000590550 OFD1O75665 1012 aa23.6■■□□□ 1.37
MBD3-207ENST00000590550 MSNP26038 577 aaKnown RBP23.6■■□□□ 1.37
MBD3-207ENST00000590550 KIAA0232Q92628 1395 aa23.6■■□□□ 1.37
MBD3-207ENST00000590550 AMPHP49418 695 aa23.6■■□□□ 1.37
MBD3-207ENST00000590550 ZSCAN30Q86W11 494 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 EYA1Q99502 592 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 USP26Q9BXU7 913 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 ZHX1Q9UKY1 873 aaPredicted RBP23.59■■□□□ 1.37
MBD3-207ENST00000590550 CIZ1Q9ULV3 898 aaPredicted RBP23.59■■□□□ 1.37
MBD3-207ENST00000590550 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 PTPRCP08575 1304 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 GBP4Q96PP9 640 aa23.59■■□□□ 1.37
MBD3-207ENST00000590550 AK9Q5TCS8 1911 aa23.58■■□□□ 1.37
MBD3-207ENST00000590550 EXOC6BQ9Y2D4 811 aa23.58■■□□□ 1.37
MBD3-207ENST00000590550 HAP1P54257 671 aaPredicted RBP23.57■■□□□ 1.36
MBD3-207ENST00000590550 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.57■■□□□ 1.36
MBD3-207ENST00000590550 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
MBD3-207ENST00000590550 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
MBD3-207ENST00000590550 NASPP49321 788 aaPredicted RBP23.56■■□□□ 1.36
MBD3-207ENST00000590550 CCDC173Q0VFZ6 552 aa23.55■■□□□ 1.36
MBD3-207ENST00000590550 PKP1Q13835 747 aa23.55■■□□□ 1.36
MBD3-207ENST00000590550 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
MBD3-207ENST00000590550 CEP170BQ9Y4F5 1589 aaPredicted RBP23.54■■□□□ 1.36
MBD3-207ENST00000590550 NLRP6P59044 892 aa23.53■■□□□ 1.36
MBD3-207ENST00000590550 RABEP1Q15276 862 aa23.53■■□□□ 1.36
MBD3-207ENST00000590550 ANP32BQ92688 251 aaKnown RBP23.53■■□□□ 1.36
MBD3-207ENST00000590550 TOPAZ1Q8N9V7 1692 aa23.52■■□□□ 1.36
MBD3-207ENST00000590550 SSH2Q76I76 1423 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms