RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 MEGF6O75095 1541 aa22.1■■□□□ 1.13
GCDH-212ENST00000590530 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
GCDH-212ENST00000590530 USP35Q9P2H5 1018 aa22.09■■□□□ 1.13
GCDH-212ENST00000590530 LAS1LQ9Y4W2 734 aaKnown RBP22.09■■□□□ 1.13
GCDH-212ENST00000590530 RRP1P56182 461 aaKnown RBP22.08■■□□□ 1.13
GCDH-212ENST00000590530 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
GCDH-212ENST00000590530 IRX6P78412 446 aaPredicted RBP22.07■■□□□ 1.12
GCDH-212ENST00000590530 RAPGEF4Q8WZA2 1011 aa22.07■■□□□ 1.12
GCDH-212ENST00000590530 FANCIQ9NVI1 1328 aa22.06■■□□□ 1.12
GCDH-212ENST00000590530 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
GCDH-212ENST00000590530 PLEKHO1Q53GL0 409 aaPredicted RBP22.06■■□□□ 1.12
GCDH-212ENST00000590530 ZNF530Q6P9A1 599 aaPredicted RBP22.06■■□□□ 1.12
GCDH-212ENST00000590530 IL17REQ8NFR9 667 aa22.06■■□□□ 1.12
GCDH-212ENST00000590530 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
GCDH-212ENST00000590530 LRP6O75581 1613 aa22.06■■□□□ 1.12
GCDH-212ENST00000590530 GNAT3A8MTJ3 354 aa22.05■■□□□ 1.12
GCDH-212ENST00000590530 IL16Q14005 1332 aa22.05■■□□□ 1.12
GCDH-212ENST00000590530 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
GCDH-212ENST00000590530 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
GCDH-212ENST00000590530 MAP3K5Q99683 1374 aa22.04■■□□□ 1.12
GCDH-212ENST00000590530 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 C8orf37Q96NL8 207 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 MIS18AQ9NYP9 233 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 CRB1P82279 1406 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 AMOTQ4VCS5 1084 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
GCDH-212ENST00000590530 MYH16Q9H6N6 1097 aa22.03■■□□□ 1.12
GCDH-212ENST00000590530 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
GCDH-212ENST00000590530 MBIPQ9NS73 344 aa22.02■■□□□ 1.12
GCDH-212ENST00000590530 PLCH1Q4KWH8 1693 aa22.01■■□□□ 1.11
GCDH-212ENST00000590530 EXOSC9Q06265 439 aaKnown RBP22.01■■□□□ 1.11
GCDH-212ENST00000590530 AKAP4Q5JQC9 854 aa22■■□□□ 1.11
GCDH-212ENST00000590530 CFAP44Q96MT7 982 aa22■■□□□ 1.11
GCDH-212ENST00000590530 IFT57Q9NWB7 429 aa22■■□□□ 1.11
GCDH-212ENST00000590530 SLIT2O94813 1529 aa22■■□□□ 1.11
GCDH-212ENST00000590530 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
GCDH-212ENST00000590530 CYP27B1O15528 508 aa21.99■■□□□ 1.11
GCDH-212ENST00000590530 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
GCDH-212ENST00000590530 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
GCDH-212ENST00000590530 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
GCDH-212ENST00000590530 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
GCDH-212ENST00000590530 IL2RBP14784 551 aa21.98■■□□□ 1.11
GCDH-212ENST00000590530 GNAI1P63096 354 aa21.98■■□□□ 1.11
GCDH-212ENST00000590530 CHL1O00533 1208 aa21.97■■□□□ 1.11
GCDH-212ENST00000590530 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
GCDH-212ENST00000590530 C1orf141Q5JVX7 400 aa21.97■■□□□ 1.11
GCDH-212ENST00000590530 PHKG2P15735 406 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 NRAPQ86VF7 1730 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 SPG7Q9UQ90 795 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
GCDH-212ENST00000590530 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
GCDH-212ENST00000590530 RNMTO43148 476 aaKnown RBP21.95■■□□□ 1.1
GCDH-212ENST00000590530 PLIN1O60240 522 aa21.95■■□□□ 1.1
GCDH-212ENST00000590530 BCAR3O75815 825 aa21.95■■□□□ 1.1
GCDH-212ENST00000590530 BCL9LQ86UU0 1499 aa21.95■■□□□ 1.1
GCDH-212ENST00000590530 ELL2O00472 640 aaPredicted RBP21.94■■□□□ 1.1
GCDH-212ENST00000590530 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
GCDH-212ENST00000590530 C8orf58Q8NAV2 365 aa21.94■■□□□ 1.1
GCDH-212ENST00000590530 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
GCDH-212ENST00000590530 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
GCDH-212ENST00000590530 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
GCDH-212ENST00000590530 KDM6AO15550 1401 aaPredicted RBP21.93■■□□□ 1.1
GCDH-212ENST00000590530 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
GCDH-212ENST00000590530 FNBP4Q8N3X1 1017 aaPredicted RBP21.92■■□□□ 1.1
GCDH-212ENST00000590530 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.92■■□□□ 1.1
GCDH-212ENST00000590530 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
GCDH-212ENST00000590530 DISP2A7MBM2 1401 aa21.92■■□□□ 1.1
GCDH-212ENST00000590530 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
GCDH-212ENST00000590530 DDX54Q8TDD1 881 aaKnown RBP21.92■■□□□ 1.1
GCDH-212ENST00000590530 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
GCDH-212ENST00000590530 SPATA31A5Q5VU36 1347 aa21.91■■□□□ 1.1
GCDH-212ENST00000590530 SPATA31A7Q8IWB4 1347 aa21.91■■□□□ 1.1
GCDH-212ENST00000590530 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
GCDH-212ENST00000590530 TSPYL4Q9UJ04 414 aa21.91■■□□□ 1.1
GCDH-212ENST00000590530 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
GCDH-212ENST00000590530 MEX3CQ5U5Q3 659 aaKnown RBP21.9■■□□□ 1.1
GCDH-212ENST00000590530 KCNQ3O43525 872 aa21.9■■□□□ 1.1
GCDH-212ENST00000590530 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
GCDH-212ENST00000590530 PELP1Q8IZL8 1130 aaKnown RBP21.89■■□□□ 1.09
GCDH-212ENST00000590530 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
GCDH-212ENST00000590530 NWD2Q9ULI1 1742 aa21.88■■□□□ 1.09
GCDH-212ENST00000590530 USP21Q9UK80 565 aa21.88■■□□□ 1.09
GCDH-212ENST00000590530 VAMP4O75379 141 aa21.88■■□□□ 1.09
GCDH-212ENST00000590530 PCDH11XQ9BZA7 1347 aa21.87■■□□□ 1.09
GCDH-212ENST00000590530 PCDH11YQ9BZA8 1340 aa21.87■■□□□ 1.09
GCDH-212ENST00000590530 TCERG1O14776 1098 aaKnown RBP21.87■■□□□ 1.09
GCDH-212ENST00000590530 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
GCDH-212ENST00000590530 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
GCDH-212ENST00000590530 TEFQ10587 303 aa21.86■■□□□ 1.09
GCDH-212ENST00000590530 VPS72Q15906 364 aa21.86■■□□□ 1.09
GCDH-212ENST00000590530 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
GCDH-212ENST00000590530 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
GCDH-212ENST00000590530 AFF2P51816 1311 aa21.85■■□□□ 1.09
GCDH-212ENST00000590530 TWISTNBQ3B726 338 aaPredicted RBP21.85■■□□□ 1.09
GCDH-212ENST00000590530 DCAF5Q96JK2 942 aa21.85■■□□□ 1.09
GCDH-212ENST00000590530 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
GCDH-212ENST00000590530 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
GCDH-212ENST00000590530 BTBD11A6QL63 1104 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms