RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 KDM4AO75164 1064 aa17.74■□□□□ 0.43
RETREG3-208ENST00000589797 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
RETREG3-208ENST00000589797 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-208ENST00000589797 KCNH5Q8NCM2 988 aa17.74■□□□□ 0.43
RETREG3-208ENST00000589797 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-208ENST00000589797 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
RETREG3-208ENST00000589797 APPP05067 770 aa17.73■□□□□ 0.43
RETREG3-208ENST00000589797 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
RETREG3-208ENST00000589797 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
RETREG3-208ENST00000589797 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
RETREG3-208ENST00000589797 NPC1L1Q9UHC9 1359 aa17.72■□□□□ 0.43
RETREG3-208ENST00000589797 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
RETREG3-208ENST00000589797 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
RETREG3-208ENST00000589797 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
RETREG3-208ENST00000589797 AACSQ86V21 672 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 IL16Q14005 1332 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 ARID3AQ99856 593 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 ERC2O15083 957 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
RETREG3-208ENST00000589797 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
RETREG3-208ENST00000589797 RNF214Q8ND24 703 aa17.7■□□□□ 0.42
RETREG3-208ENST00000589797 CHPF2Q9P2E5 772 aa17.7■□□□□ 0.42
RETREG3-208ENST00000589797 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-208ENST00000589797 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
RETREG3-208ENST00000589797 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
RETREG3-208ENST00000589797 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
RETREG3-208ENST00000589797 DRC7Q8IY82 874 aa17.7■□□□□ 0.42
RETREG3-208ENST00000589797 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
RETREG3-208ENST00000589797 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
RETREG3-208ENST00000589797 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
RETREG3-208ENST00000589797 CNTROBQ8N137 903 aa17.69■□□□□ 0.42
RETREG3-208ENST00000589797 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
RETREG3-208ENST00000589797 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
RETREG3-208ENST00000589797 MX1P20591 662 aa17.68■□□□□ 0.42
RETREG3-208ENST00000589797 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
RETREG3-208ENST00000589797 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
RETREG3-208ENST00000589797 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
RETREG3-208ENST00000589797 NUCB1Q02818 461 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 MPNDQ8N594 471 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
RETREG3-208ENST00000589797 GCP02774 474 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
RETREG3-208ENST00000589797 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
RETREG3-208ENST00000589797 MYD88Q99836 296 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
RETREG3-208ENST00000589797 STK3Q13188 491 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 TBC1D32Q96NH3 1257 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 TBX22Q9Y458 520 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 ZFYVE16Q7Z3T8 1539 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
RETREG3-208ENST00000589797 ZMYM4Q5VZL5 1548 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 H3BQV1 296 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 IFFO2Q5TF58 517 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 STK11IPQ8N1F8 1099 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 ADAMTS2O95450 1211 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 RABEP1Q15276 862 aa17.66■□□□□ 0.42
RETREG3-208ENST00000589797 HOXC9P31274 260 aa17.65■□□□□ 0.42
RETREG3-208ENST00000589797 MCM4P33991 863 aa17.65■□□□□ 0.42
RETREG3-208ENST00000589797 DTNBO60941 627 aa17.64■□□□□ 0.41
RETREG3-208ENST00000589797 ZBTB3Q9H5J0 574 aa17.64■□□□□ 0.41
RETREG3-208ENST00000589797 TRPM2O94759 1503 aa17.64■□□□□ 0.41
RETREG3-208ENST00000589797 SDSP20132 328 aa17.64■□□□□ 0.41
RETREG3-208ENST00000589797 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
RETREG3-208ENST00000589797 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
RETREG3-208ENST00000589797 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
RETREG3-208ENST00000589797 NUCB2P80303 420 aa17.63■□□□□ 0.41
RETREG3-208ENST00000589797 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
RETREG3-208ENST00000589797 CWF19L2Q2TBE0 894 aaKnown RBP17.62■□□□□ 0.41
RETREG3-208ENST00000589797 DBF4Q9UBU7 674 aaPredicted RBP17.62■□□□□ 0.41
RETREG3-208ENST00000589797 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
RETREG3-208ENST00000589797 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
RETREG3-208ENST00000589797 NEO1Q92859 1461 aa17.62■□□□□ 0.41
RETREG3-208ENST00000589797 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
RETREG3-208ENST00000589797 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
RETREG3-208ENST00000589797 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
RETREG3-208ENST00000589797 PPFIA3O75145 1194 aa17.62■□□□□ 0.41
RETREG3-208ENST00000589797 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
RETREG3-208ENST00000589797 ARHGAP45Q92619 1136 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 MLH3Q9UHC1 1453 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 FIBPO43427 364 aa17.61■□□□□ 0.41
RETREG3-208ENST00000589797 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
RETREG3-208ENST00000589797 FLT4P35916 1363 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 SF3A1Q15459 793 aaKnown RBP17.6■□□□□ 0.41
RETREG3-208ENST00000589797 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 PTPRCP08575 1304 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 SBNO2Q9Y2G9 1366 aa17.6■□□□□ 0.41
RETREG3-208ENST00000589797 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms