RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	NUDT16	Q96DE0	195 aa	Known RBP	13.86	□□□□□ -0.19
ILF3-208	ENST00000587928	IL17RA	Q96F46	866 aa		13.86	□□□□□ -0.19
ILF3-208	ENST00000587928	NME9	Q86XW9	330 aa		13.86	□□□□□ -0.19
ILF3-208	ENST00000587928	KIF16B	Q96L93	1317 aa		13.86	□□□□□ -0.19
ILF3-208	ENST00000587928	IGSF1	Q8N6C5	1336 aa		13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	NPM2	Q86SE8	214 aa	Known RBP	13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	DIAPH1	O60610	1272 aa	Known RBP	13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	FBLN1	P23142	703 aa		13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	TTC21B	Q7Z4L5	1316 aa		13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	SALL3	Q9BXA9	1300 aa		13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	EMILIN1	Q9Y6C2	1016 aa		13.85	□□□□□ -0.19
ILF3-208	ENST00000587928	NUCB1	Q02818	461 aa		13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	BRPF3	Q9ULD4	1205 aa		13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	LAS1L	Q9Y4W2	734 aa	Known RBP	13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	STRC	Q7RTU9	1775 aa		13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	CEMIP	Q8WUJ3	1361 aa		13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	TBX22	Q9Y458	520 aa		13.84	□□□□□ -0.19
ILF3-208	ENST00000587928	SBNO1	A3KN83	1393 aa		13.83	□□□□□ -0.19
ILF3-208	ENST00000587928	CCDC61	Q9Y6R9	512 aa		13.83	□□□□□ -0.19
ILF3-208	ENST00000587928	HEG1	Q9ULI3	1381 aa		13.83	□□□□□ -0.2
ILF3-208	ENST00000587928	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.83	□□□□□ -0.2
ILF3-208	ENST00000587928	MLEC	Q14165	292 aa		13.83	□□□□□ -0.2
ILF3-208	ENST00000587928	STK26	Q9P289	416 aa		13.83	□□□□□ -0.2
ILF3-208	ENST00000587928	SRPK2	P78362	688 aa	Known RBP	13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	ARFGEF2	Q9Y6D5	1785 aa		13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	TSPYL6	Q8N831	410 aa		13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	PDZRN3	Q9UPQ7	1066 aa		13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	CIC	Q96RK0	1608 aa	Predicted RBP	13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	CHL1	O00533	1208 aa		13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	MBIP	Q9NS73	344 aa		13.82	□□□□□ -0.2
ILF3-208	ENST00000587928	NHSL1	Q5SYE7	1610 aa		13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	PMFBP1	Q8TBY8	1022 aa		13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	EIF4A2	Q14240	407 aa	Known RBP	13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	CFAP44	Q96MT7	982 aa		13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	TTC21A	Q8NDW8	1320 aa		13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	RBM25	P49756	843 aa	Known RBP	13.81	□□□□□ -0.2
ILF3-208	ENST00000587928	PLEKHG2	Q9H7P9	1386 aa		13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	TMEM57	Q8N5G2	664 aa		13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	TOGARAM1	Q9Y4F4	1720 aa		13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	ZKSCAN2	Q63HK3	967 aa		13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	DZIP1L	Q8IYY4	767 aa	Known RBP	13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	TRIM44	Q96DX7	344 aa	Predicted RBP	13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	NOB1	Q9ULX3	412 aa	Known RBP	13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	CDK11B	P21127	795 aa	Known RBP	13.8	□□□□□ -0.2
ILF3-208	ENST00000587928	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.79	□□□□□ -0.2
ILF3-208	ENST00000587928	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
ILF3-208	ENST00000587928	ADGRL3	Q9HAR2	1447 aa		13.79	□□□□□ -0.2
ILF3-208	ENST00000587928	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.79	□□□□□ -0.2
ILF3-208	ENST00000587928	INTS3	Q68E01	1043 aa	Known RBP	13.79	□□□□□ -0.2
ILF3-208	ENST00000587928	CASZ1	Q86V15	1759 aa		13.78	□□□□□ -0.2
ILF3-208	ENST00000587928	ACE	P12821	1306 aa		13.78	□□□□□ -0.2
ILF3-208	ENST00000587928	PRKAR2B	P31323	418 aa		13.78	□□□□□ -0.2
ILF3-208	ENST00000587928	RIPK4	P57078	832 aa		13.78	□□□□□ -0.2
ILF3-208	ENST00000587928	PLCH1	Q4KWH8	1693 aa		13.78	□□□□□ -0.2
ILF3-208	ENST00000587928	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.77	□□□□□ -0.21
ILF3-208	ENST00000587928	MYH15	Q9Y2K3	1946 aa		13.77	□□□□□ -0.21
ILF3-208	ENST00000587928	TXNDC2	Q86VQ3	553 aa		13.76	□□□□□ -0.21
ILF3-208	ENST00000587928	C8orf58	Q8NAV2	365 aa		13.76	□□□□□ -0.21
ILF3-208	ENST00000587928	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.76	□□□□□ -0.21
ILF3-208	ENST00000587928	FLT4	P35916	1363 aa		13.75	□□□□□ -0.21
ILF3-208	ENST00000587928	MAP3K19	Q56UN5	1328 aa		13.75	□□□□□ -0.21
ILF3-208	ENST00000587928	PXDN	Q92626	1479 aa		13.75	□□□□□ -0.21
ILF3-208	ENST00000587928	DDX19B	Q9UMR2	479 aa		13.75	□□□□□ -0.21
ILF3-208	ENST00000587928	RREB1	Q92766	1687 aa		13.74	□□□□□ -0.21
ILF3-208	ENST00000587928	NEUROD2	Q15784	382 aa		13.74	□□□□□ -0.21
ILF3-208	ENST00000587928	MAP7D2	Q96T17	732 aa		13.74	□□□□□ -0.21
ILF3-208	ENST00000587928	AFDN	P55196	1824 aa	Known RBP	13.73	□□□□□ -0.21
ILF3-208	ENST00000587928	CLEC17A	Q6ZS10	378 aa		13.73	□□□□□ -0.21
ILF3-208	ENST00000587928	AEBP1	Q8IUX7	1158 aa		13.72	□□□□□ -0.21
ILF3-208	ENST00000587928	BCL2L13	Q9BXK5	485 aa		13.72	□□□□□ -0.21
ILF3-208	ENST00000587928	LAMA4	Q16363	1823 aa		13.72	□□□□□ -0.21
ILF3-208	ENST00000587928	DNAJC5	Q9H3Z4	198 aa		13.72	□□□□□ -0.21
ILF3-208	ENST00000587928	CALD1	Q05682	793 aa	Known RBP	13.71	□□□□□ -0.21
ILF3-208	ENST00000587928	TPM2	P07951	284 aa		13.71	□□□□□ -0.21
ILF3-208	ENST00000587928	NFKBIB	Q15653	356 aa		13.71	□□□□□ -0.22
ILF3-208	ENST00000587928	BMP2KL	Q5H9B9	411 aa		13.71	□□□□□ -0.22
ILF3-208	ENST00000587928	SNX21	Q969T3	373 aa		13.7	□□□□□ -0.22
ILF3-208	ENST00000587928	TBC1D2	Q9BYX2	928 aa		13.7	□□□□□ -0.22
ILF3-208	ENST00000587928		A0A1B0GUL6	1792 aa		13.7	□□□□□ -0.22
ILF3-208	ENST00000587928	U2SURP	O15042	1029 aa	Known RBP	13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	GSPT1	P15170	499 aa	Known RBP	13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	PDCL3	Q9H2J4	239 aa		13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	FAM83G	A6ND36	823 aa		13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	RRS1	Q15050	365 aa	Known RBP	13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	THUMPD2	Q9BTF0	503 aa	Known RBP	13.69	□□□□□ -0.22
ILF3-208	ENST00000587928	SOS1	Q07889	1333 aa	Predicted RBP	13.68	□□□□□ -0.22
ILF3-208	ENST00000587928	BBX	Q8WY36	941 aa	Predicted RBP	13.68	□□□□□ -0.22
ILF3-208	ENST00000587928	RWDD1	Q9H446	243 aa	Predicted RBP	13.68	□□□□□ -0.22
ILF3-208	ENST00000587928	GNAI1	P63096	354 aa		13.68	□□□□□ -0.22
ILF3-208	ENST00000587928	KLHL34	Q8N239	644 aa		13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	DCTPP1	Q9H773	170 aa		13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	OSBPL3	Q9H4L5	887 aa		13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	TMEM94	Q12767	1356 aa		13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	DCC	P43146	1447 aa		13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	HTATSF1	O43719	755 aa	Known RBP	13.67	□□□□□ -0.22
ILF3-208	ENST00000587928	ANP32B	Q92688	251 aa	Known RBP	13.66	□□□□□ -0.22
ILF3-208	ENST00000587928	BABAM1	Q9NWV8	329 aa		13.66	□□□□□ -0.22
ILF3-208	ENST00000587928	ANKRD36C	Q5JPF3	1778 aa		13.66	□□□□□ -0.22
ILF3-208	ENST00000587928	SMC4	Q9NTJ3	1288 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms