RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 INSRP06213 1382 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 UQCRHLA0A096LP55 91 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 UQCRHP07919 91 aa16.65■□□□□ 0.26
CACNA1A-209ENST00000587525 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
CACNA1A-209ENST00000587525 ZNF518AQ6AHZ1 1483 aa16.64■□□□□ 0.25
CACNA1A-209ENST00000587525 ZNF830Q96NB3 372 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-209ENST00000587525 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
CACNA1A-209ENST00000587525 GAS2L3Q86XJ1 694 aa16.64■□□□□ 0.25
CACNA1A-209ENST00000587525 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 FLIIQ13045 1269 aa16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-209ENST00000587525 MX1P20591 662 aa16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 GNAI3P08754 354 aa16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 RIC3Q7Z5B4 369 aa16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 ZNF592Q92610 1267 aa16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 CCDC8Q9H0W5 538 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-209ENST00000587525 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 MAST1Q9Y2H9 1570 aa16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 ABCC1P33527 1531 aa16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 NPATQ14207 1427 aa16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
CACNA1A-209ENST00000587525 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 CAMK4Q16566 473 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 IGSF3O75054 1194 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 CCDC83Q8IWF9 413 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 SIRT2Q8IXJ6 389 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 ZSCAN30Q86W11 494 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
CACNA1A-209ENST00000587525 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-209ENST00000587525 BICD2Q8TD16 824 aa16.58■□□□□ 0.25
CACNA1A-209ENST00000587525 LRRC59Q96AG4 307 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-209ENST00000587525 GPATCH3Q96I76 525 aa16.58■□□□□ 0.25
CACNA1A-209ENST00000587525 H3BQV1 296 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 IL13P35225 146 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 CCDC173Q0VFZ6 552 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 IFFO2Q5TF58 517 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 TSC1Q92574 1164 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 PTMSP20962 102 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 PDE1AP54750 535 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 AACSQ86V21 672 aa16.58■□□□□ 0.24
CACNA1A-209ENST00000587525 ABCC11Q96J66 1382 aa16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 TPM2P07951 284 aa16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 ZKSCAN1P17029 563 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
CACNA1A-209ENST00000587525 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 PNMA6EA0A0J9YXQ4 647 aa16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 GNAT3A8MTJ3 354 aa16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 TULP1O00294 542 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 CBX1P83916 185 aa16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 TFIP11Q9UBB9 837 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-209ENST00000587525 CHMP4CQ96CF2 233 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 USP25Q9UHP3 1055 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 DCTPP1Q9H773 170 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 EIF2AK4Q9P2K8 1649 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 NPHP1O15259 732 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 FAM184AQ8NB25 1140 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 EYA1Q99502 592 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
CACNA1A-209ENST00000587525 ZSCAN23Q3MJ62 389 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
CACNA1A-209ENST00000587525 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms