RNA–Protein interactions for RNA: ENST00000587184.5

LAMA3-207, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,007 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-207ENST00000587184 SLIT1O75093 1534 aa11.14□□□□□ -0.63
LAMA3-207ENST00000587184 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 NPHP1O15259 732 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 AIMP1Q12904 312 aaKnown RBP11.13□□□□□ -0.63
LAMA3-207ENST00000587184 ARHGEF10O15013 1369 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
LAMA3-207ENST00000587184 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 BECN1Q14457 450 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 MED14O60244 1454 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
LAMA3-207ENST00000587184 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
LAMA3-207ENST00000587184 GNAI3P08754 354 aa11.11□□□□□ -0.63
LAMA3-207ENST00000587184 CCT4P50991 539 aaKnown RBP11.11□□□□□ -0.63
LAMA3-207ENST00000587184 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
LAMA3-207ENST00000587184 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
LAMA3-207ENST00000587184 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
LAMA3-207ENST00000587184 TRIM27P14373 513 aa11.11□□□□□ -0.63
LAMA3-207ENST00000587184 C3P01024 1663 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 DIP2AQ14689 1571 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
LAMA3-207ENST00000587184 C8orf58Q8NAV2 365 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 IFT172Q9UG01 1749 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 CDK12Q9NYV4 1490 aaPredicted RBP11.1□□□□□ -0.63
LAMA3-207ENST00000587184 PDE4AP27815 886 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
LAMA3-207ENST00000587184 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
LAMA3-207ENST00000587184 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 KIF24Q5T7B8 1368 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 VAMP4O75379 141 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
LAMA3-207ENST00000587184 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 HMGB2P26583 209 aaKnown RBP11.08□□□□□ -0.64
LAMA3-207ENST00000587184 ZCRB1Q8TBF4 217 aaKnown RBP11.08□□□□□ -0.64
LAMA3-207ENST00000587184 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 TSPYL6Q8N831 410 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
LAMA3-207ENST00000587184 EXOC5O00471 708 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 GNAI2P04899 355 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 MYL6BP14649 208 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 PNPLA6Q8IY17 1366 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 CPS1P31327 1500 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 PTPRCP08575 1304 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
LAMA3-207ENST00000587184 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 CHL1O00533 1208 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 TRMT2AQ8IZ69 625 aaKnown RBP11.06□□□□□ -0.64
LAMA3-207ENST00000587184 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
LAMA3-207ENST00000587184 IL2RBP14784 551 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 DBF4Q9UBU7 674 aaPredicted RBP11.06□□□□□ -0.64
LAMA3-207ENST00000587184 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 ANP32EQ9BTT0 268 aa11.06□□□□□ -0.64
LAMA3-207ENST00000587184 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
LAMA3-207ENST00000587184 GCC1Q96CN9 775 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 FLIIQ13045 1269 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 C1orf167Q5SNV9 1468 aa11.05□□□□□ -0.64
LAMA3-207ENST00000587184 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
LAMA3-207ENST00000587184 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
LAMA3-207ENST00000587184 F6X3S4 739 aa11.04□□□□□ -0.64
LAMA3-207ENST00000587184 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
LAMA3-207ENST00000587184 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
LAMA3-207ENST00000587184 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
LAMA3-207ENST00000587184 RPAP2Q8IXW5 612 aaPredicted RBP11.03□□□□□ -0.64
LAMA3-207ENST00000587184 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
LAMA3-207ENST00000587184 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
LAMA3-207ENST00000587184 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
LAMA3-207ENST00000587184 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
LAMA3-207ENST00000587184 HYPKQ9NX55 129 aa11.03□□□□□ -0.64
LAMA3-207ENST00000587184 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
LAMA3-207ENST00000587184 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.64
LAMA3-207ENST00000587184 CD163L1Q9NR16 1453 aa11.02□□□□□ -0.64
LAMA3-207ENST00000587184 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.64
LAMA3-207ENST00000587184 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 TNNQ9UQP3 1299 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 KCNJ4P48050 445 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 GORABQ5T7V8 394 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 KIF6Q6ZMV9 814 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 OVOS2A0A0J9YW53 1432 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 OVOS2Q6IE36 1432 aa11.02□□□□□ -0.65
LAMA3-207ENST00000587184 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
LAMA3-207ENST00000587184 STARD3NLO95772 234 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms