RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 ROBO2Q9HCK4 1378 aa22.87■■□□□ 1.25
PKN1-204ENST00000585839 KIAA1210Q9ULL0 1709 aa22.87■■□□□ 1.25
PKN1-204ENST00000585839 DIP2CQ9Y2E4 1556 aa22.86■■□□□ 1.25
PKN1-204ENST00000585839 PRPF40AO75400 957 aaKnown RBP22.86■■□□□ 1.25
PKN1-204ENST00000585839 AIMP1Q12904 312 aaKnown RBP22.86■■□□□ 1.25
PKN1-204ENST00000585839 TTC22Q5TAA0 569 aa22.86■■□□□ 1.25
PKN1-204ENST00000585839 INTS3Q68E01 1043 aaKnown RBP22.86■■□□□ 1.25
PKN1-204ENST00000585839 ARID3AQ99856 593 aa22.86■■□□□ 1.25
PKN1-204ENST00000585839 LRRFIP2Q9Y608 721 aaKnown RBP22.86■■□□□ 1.25
PKN1-204ENST00000585839 HMMRO75330 724 aa22.85■■□□□ 1.25
PKN1-204ENST00000585839 RNF214Q8ND24 703 aa22.85■■□□□ 1.25
PKN1-204ENST00000585839 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
PKN1-204ENST00000585839 ALKQ9UM73 1620 aa22.84■■□□□ 1.25
PKN1-204ENST00000585839 PHAXQ9H814 394 aaKnown RBP22.84■■□□□ 1.25
PKN1-204ENST00000585839 GRPEL1Q9HAV7 217 aa22.84■■□□□ 1.25
PKN1-204ENST00000585839 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
PKN1-204ENST00000585839 FAM135BQ49AJ0 1406 aa22.84■■□□□ 1.25
PKN1-204ENST00000585839 NEO1Q92859 1461 aa22.84■■□□□ 1.25
PKN1-204ENST00000585839 SURF6O75683 361 aaKnown RBP22.83■■□□□ 1.25
PKN1-204ENST00000585839 PLCB2Q00722 1185 aa22.83■■□□□ 1.25
PKN1-204ENST00000585839 GAS2L3Q86XJ1 694 aa22.83■■□□□ 1.25
PKN1-204ENST00000585839 GDPD2Q9HCC8 539 aa22.83■■□□□ 1.25
PKN1-204ENST00000585839 HDGFL1Q5TGJ6 251 aa22.83■■□□□ 1.24
PKN1-204ENST00000585839 DCTPP1Q9H773 170 aa22.83■■□□□ 1.24
PKN1-204ENST00000585839 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.24
PKN1-204ENST00000585839 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
PKN1-204ENST00000585839 ZNF853P0CG23 659 aa22.82■■□□□ 1.24
PKN1-204ENST00000585839 ABCC4O15439 1325 aa22.82■■□□□ 1.24
PKN1-204ENST00000585839 ANKRD44Q8N8A2 993 aa22.82■■□□□ 1.24
PKN1-204ENST00000585839 ZC3H13Q5T200 1668 aaKnown RBP22.82■■□□□ 1.24
PKN1-204ENST00000585839 ANP32BQ92688 251 aaKnown RBP22.82■■□□□ 1.24
PKN1-204ENST00000585839 ESCO1Q5FWF5 840 aa22.81■■□□□ 1.24
PKN1-204ENST00000585839 LRRC59Q96AG4 307 aaKnown RBP22.81■■□□□ 1.24
PKN1-204ENST00000585839 KIF2CQ99661 725 aa22.81■■□□□ 1.24
PKN1-204ENST00000585839 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
PKN1-204ENST00000585839 FLIIQ13045 1269 aa22.81■■□□□ 1.24
PKN1-204ENST00000585839 MPRIPQ6WCQ1 1025 aa22.81■■□□□ 1.24
PKN1-204ENST00000585839 ARHGAP45Q92619 1136 aa22.81■■□□□ 1.24
PKN1-204ENST00000585839 ARHGEF40Q8TER5 1519 aa22.8■■□□□ 1.24
PKN1-204ENST00000585839 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
PKN1-204ENST00000585839 CHL1O00533 1208 aa22.8■■□□□ 1.24
PKN1-204ENST00000585839 GNAI2P04899 355 aa22.8■■□□□ 1.24
PKN1-204ENST00000585839 RBM25P49756 843 aaKnown RBP22.8■■□□□ 1.24
PKN1-204ENST00000585839 CPS1P31327 1500 aa22.8■■□□□ 1.24
PKN1-204ENST00000585839 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
PKN1-204ENST00000585839 ST18O60284 1047 aa22.79■■□□□ 1.24
PKN1-204ENST00000585839 ZFYVE9O95405 1425 aa22.79■■□□□ 1.24
PKN1-204ENST00000585839 EDC4Q6P2E9 1401 aaKnown RBP22.79■■□□□ 1.24
PKN1-204ENST00000585839 TNRQ92752 1358 aa22.79■■□□□ 1.24
PKN1-204ENST00000585839 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
PKN1-204ENST00000585839 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
PKN1-204ENST00000585839 KCNA6P17658 529 aa22.78■■□□□ 1.24
PKN1-204ENST00000585839 UBTFL1P0CB47 393 aaPredicted RBP22.78■■□□□ 1.24
PKN1-204ENST00000585839 PIP4K2AP48426 406 aaPredicted RBP22.78■■□□□ 1.24
PKN1-204ENST00000585839 PSME1Q06323 249 aa22.78■■□□□ 1.24
PKN1-204ENST00000585839 KCNQ3O43525 872 aa22.77■■□□□ 1.24
PKN1-204ENST00000585839 RPAP2Q8IXW5 612 aaPredicted RBP22.77■■□□□ 1.23
PKN1-204ENST00000585839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.75■■□□□ 1.23
PKN1-204ENST00000585839 CHMP3Q9Y3E7 222 aa22.75■■□□□ 1.23
PKN1-204ENST00000585839 HAP1P54257 671 aaPredicted RBP22.75■■□□□ 1.23
PKN1-204ENST00000585839 TEFQ10587 303 aa22.75■■□□□ 1.23
PKN1-204ENST00000585839 BAG4O95429 457 aaKnown RBP22.75■■□□□ 1.23
PKN1-204ENST00000585839 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
PKN1-204ENST00000585839 PDE1AP54750 535 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 USP26Q9BXU7 913 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 REC8O95072 547 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 SRGAP3O43295 1099 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 RABEP1Q15276 862 aa22.74■■□□□ 1.23
PKN1-204ENST00000585839 ERC2O15083 957 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 KCNJ4P48050 445 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 MRE11P49959 708 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 UNC5CLQ8IV45 518 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 SIL1Q9H173 461 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 CPA1P15085 419 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 CCDC30Q5VVM6 783 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 MYO3AQ8NEV4 1616 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 ARHGAP31Q2M1Z3 1444 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 FAM43AQ8N2R8 423 aa22.73■■□□□ 1.23
PKN1-204ENST00000585839 TAF7Q15545 349 aaPredicted RBP22.72■■□□□ 1.23
PKN1-204ENST00000585839 RAB3GAP1Q15042 981 aa22.71■■□□□ 1.23
PKN1-204ENST00000585839 PALD1Q9ULE6 856 aa22.71■■□□□ 1.23
PKN1-204ENST00000585839 SETD1BQ9UPS6 1966 aaKnown RBP22.71■■□□□ 1.23
PKN1-204ENST00000585839 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
PKN1-204ENST00000585839 MX1P20591 662 aa22.71■■□□□ 1.23
PKN1-204ENST00000585839 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
PKN1-204ENST00000585839 CWC27Q6UX04 472 aaKnown RBP22.7■■□□□ 1.23
PKN1-204ENST00000585839 SPG7Q9UQ90 795 aa22.7■■□□□ 1.23
PKN1-204ENST00000585839 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
PKN1-204ENST00000585839 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
PKN1-204ENST00000585839 NASPP49321 788 aaPredicted RBP22.7■■□□□ 1.22
PKN1-204ENST00000585839 SNX21Q969T3 373 aa22.69■■□□□ 1.22
PKN1-204ENST00000585839 PI4KAP2A4QPH2 592 aa22.69■■□□□ 1.22
PKN1-204ENST00000585839 ZNF530Q6P9A1 599 aaPredicted RBP22.69■■□□□ 1.22
PKN1-204ENST00000585839 PI4KAP1Q8N8J0 262 aa22.69■■□□□ 1.22
PKN1-204ENST00000585839 C9orf78Q9NZ63 289 aaPredicted RBP22.69■■□□□ 1.22
PKN1-204ENST00000585839 CHPF2Q9P2E5 772 aa22.69■■□□□ 1.22
PKN1-204ENST00000585839 CCT4P50991 539 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms