RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RPAP2Q8IXW5 612 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-237ENST00000585163 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
CDK5RAP3-237ENST00000585163 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
CDK5RAP3-237ENST00000585163 OVOS2A0A0J9YW53 1432 aa17.6■□□□□ 0.41
CDK5RAP3-237ENST00000585163 OVOS2Q6IE36 1432 aa17.6■□□□□ 0.41
CDK5RAP3-237ENST00000585163 PTMSP20962 102 aa17.6■□□□□ 0.41
CDK5RAP3-237ENST00000585163 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
CDK5RAP3-237ENST00000585163 PTPRCP08575 1304 aa17.59■□□□□ 0.41
CDK5RAP3-237ENST00000585163 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-237ENST00000585163 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
CDK5RAP3-237ENST00000585163 MCM10Q7L590 875 aa17.59■□□□□ 0.41
CDK5RAP3-237ENST00000585163 GRPEL1Q9HAV7 217 aa17.59■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.41
CDK5RAP3-237ENST00000585163 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
CDK5RAP3-237ENST00000585163 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.41
CDK5RAP3-237ENST00000585163 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
CDK5RAP3-237ENST00000585163 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 MSH6P52701 1360 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 RABEP1Q15276 862 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 NALCNQ8IZF0 1738 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 ACEP12821 1306 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
CDK5RAP3-237ENST00000585163 PEAK1Q9H792 1746 aa17.56■□□□□ 0.4
CDK5RAP3-237ENST00000585163 HSP90AB2PQ58FF8 381 aa17.56■□□□□ 0.4
CDK5RAP3-237ENST00000585163 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
CDK5RAP3-237ENST00000585163 CRB1P82279 1406 aa17.56■□□□□ 0.4
CDK5RAP3-237ENST00000585163 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-237ENST00000585163 USP31Q70CQ4 1352 aa17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 USP6P35125 1406 aa17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 TNRQ92752 1358 aa17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 MEIS3Q99687 375 aa17.55■□□□□ 0.4
CDK5RAP3-237ENST00000585163 UBR1Q8IWV7 1749 aa17.54■□□□□ 0.4
CDK5RAP3-237ENST00000585163 SSFA2P28290 1259 aa17.54■□□□□ 0.4
CDK5RAP3-237ENST00000585163 SDSP20132 328 aa17.53■□□□□ 0.4
CDK5RAP3-237ENST00000585163 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
CDK5RAP3-237ENST00000585163 CASC1Q6TDU7 716 aa17.52■□□□□ 0.39
CDK5RAP3-237ENST00000585163 GAS2L3Q86XJ1 694 aa17.52■□□□□ 0.39
CDK5RAP3-237ENST00000585163 ARHGEF10O15013 1369 aa17.52■□□□□ 0.39
CDK5RAP3-237ENST00000585163 SSH2Q76I76 1423 aa17.52■□□□□ 0.39
CDK5RAP3-237ENST00000585163 GOLGA6L22H0YM25 854 aa17.51■□□□□ 0.39
CDK5RAP3-237ENST00000585163 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-237ENST00000585163 CLCN1P35523 988 aa17.5■□□□□ 0.39
CDK5RAP3-237ENST00000585163 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
CDK5RAP3-237ENST00000585163 HMMRO75330 724 aa17.5■□□□□ 0.39
CDK5RAP3-237ENST00000585163 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-237ENST00000585163 NUTM2FA1L443 756 aa17.49■□□□□ 0.39
CDK5RAP3-237ENST00000585163 APBB1O00213 710 aa17.49■□□□□ 0.39
CDK5RAP3-237ENST00000585163 MTHFSDQ2M296 383 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-237ENST00000585163 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
CDK5RAP3-237ENST00000585163 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 NUCB2P80303 420 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 KLHL40Q2TBA0 621 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 OSBPL3Q9H4L5 887 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 KDRP35968 1356 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 FOXO3O43524 673 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 REC8O95072 547 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 CCT4P50991 539 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
CDK5RAP3-237ENST00000585163 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 CYP2E1P05181 493 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 G2E3Q7L622 706 aa17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 IBTKQ9P2D0 1353 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
CDK5RAP3-237ENST00000585163 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 SOX12O15370 315 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 ST18O60284 1047 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 LTKP29376 864 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 SBNO1A3KN83 1393 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 FLT4P35916 1363 aa17.46■□□□□ 0.39
CDK5RAP3-237ENST00000585163 CWC22Q9HCG8 908 aaKnown RBP17.46■□□□□ 0.38
CDK5RAP3-237ENST00000585163 F6X3S4 739 aa17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 ERC2O15083 957 aa17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 PDE1AP54750 535 aa17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 DDX49Q9Y6V7 483 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-237ENST00000585163 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
CDK5RAP3-237ENST00000585163 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
CDK5RAP3-237ENST00000585163 GNAI2P04899 355 aa17.43■□□□□ 0.38
CDK5RAP3-237ENST00000585163 ESPNB1AK53 854 aa17.42■□□□□ 0.38
CDK5RAP3-237ENST00000585163 EYA1Q99502 592 aa17.42■□□□□ 0.38
CDK5RAP3-237ENST00000585163 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-237ENST00000585163 PKP1Q13835 747 aa17.42■□□□□ 0.38
CDK5RAP3-237ENST00000585163 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
CDK5RAP3-237ENST00000585163 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
CDK5RAP3-237ENST00000585163 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-237ENST00000585163 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
CDK5RAP3-237ENST00000585163 TRIM44Q96DX7 344 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-237ENST00000585163 SLC26A8Q96RN1 970 aa17.41■□□□□ 0.38
CDK5RAP3-237ENST00000585163 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
CDK5RAP3-237ENST00000585163 ZGPATQ8N5A5 531 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-237ENST00000585163 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms