RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 CLGNO14967 610 aa14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MVPQ14764 893 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 SIRT1Q96EB6 747 aa14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MAFGO15525 162 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 PRKAR2BP31323 418 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 NSD2O96028 1365 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 USP32Q8NFA0 1604 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
CDK5RAP3-231ENST00000584063 XPCQ01831 940 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-231ENST00000584063 TMEM57Q8N5G2 664 aa14.47□□□□□ -0.09
CDK5RAP3-231ENST00000584063 DLC1Q96QB1 1528 aa14.47□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
CDK5RAP3-231ENST00000584063 RRP9O43818 475 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-231ENST00000584063 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
CDK5RAP3-231ENST00000584063 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-231ENST00000584063 RWDD1Q9H446 243 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-231ENST00000584063 SLIT1O75093 1534 aa14.46□□□□□ -0.09
CDK5RAP3-231ENST00000584063 KDM4FA0A1W2PPD8 638 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 PANK2Q9BZ23 570 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 TTC21BQ7Z4L5 1316 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 TECPR2O15040 1411 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ADGRB2O60241 1585 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 BRPF1P55201 1214 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 TBC1D32Q96NH3 1257 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 VGLL3A8MV65 326 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 NLRP6P59044 892 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 TMTC2Q8N394 836 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
CDK5RAP3-231ENST00000584063 SGSM3Q96HU1 749 aa14.44□□□□□ -0.1
CDK5RAP3-231ENST00000584063 SETD1BQ9UPS6 1966 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-231ENST00000584063 DCTN1Q14203 1278 aa14.44□□□□□ -0.1
CDK5RAP3-231ENST00000584063 LNPKQ9C0E8 428 aa14.44□□□□□ -0.1
CDK5RAP3-231ENST00000584063 FAM83GA6ND36 823 aa14.43□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
CDK5RAP3-231ENST00000584063 PROSER2Q86WR7 435 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ZNF622Q969S3 477 aaKnown RBP eCLIP14.43□□□□□ -0.11e-10■■□□□ 12.5
CDK5RAP3-231ENST00000584063 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-231ENST00000584063 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-231ENST00000584063 APPP05067 770 aa14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ATF7IPQ6VMQ6 1270 aa14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ABTB2Q8N961 1025 aa14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 C22orf23Q9BZE7 217 aa14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ATP7BP35670 1465 aa14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 CPSF1Q10570 1443 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-231ENST00000584063 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 LTV1Q96GA3 475 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 RRAGDQ9NQL2 400 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 MED14O60244 1454 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 PLEKHG3A1L390 1219 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 FOXO3O43524 673 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 PHF14O94880 888 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 CPS1P31327 1500 aa14.41□□□□□ -0.1
CDK5RAP3-231ENST00000584063 PSME1Q06323 249 aa14.4□□□□□ -0.1
CDK5RAP3-231ENST00000584063 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
CDK5RAP3-231ENST00000584063 AMPHP49418 695 aa14.39□□□□□ -0.11
CDK5RAP3-231ENST00000584063 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
CDK5RAP3-231ENST00000584063 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
CDK5RAP3-231ENST00000584063 AEBP1Q8IUX7 1158 aa14.38□□□□□ -0.11
CDK5RAP3-231ENST00000584063 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
CDK5RAP3-231ENST00000584063 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-231ENST00000584063 SULT6B1Q6IMI4 303 aa14.37□□□□□ -0.11
CDK5RAP3-231ENST00000584063 NPHP4O75161 1426 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-231ENST00000584063 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDK5RAP3-231ENST00000584063 CALD1Q05682 793 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-231ENST00000584063 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-231ENST00000584063 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
CDK5RAP3-231ENST00000584063 MCM4P33991 863 aa14.36□□□□□ -0.11
CDK5RAP3-231ENST00000584063 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-231ENST00000584063 USP6P35125 1406 aa14.36□□□□□ -0.11
CDK5RAP3-231ENST00000584063 FCHSD2O94868 740 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 ADRA2BP18089 450 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 IL13P35225 146 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 MPNDQ8N594 471 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 C8orf58Q8NAV2 365 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 MBIPQ9NS73 344 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-231ENST00000584063 KNDC1Q76NI1 1749 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 TMEM51Q9NW97 253 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 APBB1O00213 710 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 MMP14P50281 582 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 ANKRD45Q5TZF3 282 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 PTCH1Q13635 1447 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 TRAK2O60296 914 aa14.34□□□□□ -0.11
CDK5RAP3-231ENST00000584063 VAMP4O75379 141 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms