RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 AMOTL2Q9Y2J4 779 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 TATP17735 454 aaPredicted RBP7.08□□□□□ -1.28
RTTN-209ENST00000583043 C8orf34Q49A92 452 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 FAM184AQ8NB25 1140 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 KRT32Q14532 448 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 PHF8Q9UPP1 1060 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 ERCC6L2Q5T890 1561 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 MCM4P33991 863 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 CPLX2Q6PUV4 134 aaKnown RBP7.08□□□□□ -1.28
RTTN-209ENST00000583043 KIF1BPQ96EK5 621 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 ACEP12821 1306 aa7.08□□□□□ -1.28
RTTN-209ENST00000583043 MSH5O43196 834 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 NME9Q86XW9 330 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 WDR33Q9C0J8 1336 aaKnown RBP7.07□□□□□ -1.28
RTTN-209ENST00000583043 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 TRAK2O60296 914 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 MBIPQ9NS73 344 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 USP32Q8NFA0 1604 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 CPSF1Q10570 1443 aaKnown RBP7.07□□□□□ -1.28
RTTN-209ENST00000583043 ANKARQ7Z5J8 1434 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 ABCA6Q8N139 1617 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 VAMP4O75379 141 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 IL13P35225 146 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 CCDC173Q0VFZ6 552 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 WAPLQ7Z5K2 1190 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 DCTPP1Q9H773 170 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 REREQ9P2R6 1566 aa7.07□□□□□ -1.28
RTTN-209ENST00000583043 GLRX3O76003 335 aaKnown RBP7.06□□□□□ -1.28
RTTN-209ENST00000583043 HYPKQ9NX55 129 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 ANO2Q9NQ90 1003 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
RTTN-209ENST00000583043 RILPL2Q969X0 211 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 EMILIN1Q9Y6C2 1016 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 ARHGEF40Q8TER5 1519 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 RBM25P49756 843 aaKnown RBP7.06□□□□□ -1.28
RTTN-209ENST00000583043 SH2B1Q9NRF2 756 aaPredicted RBP7.06□□□□□ -1.28
RTTN-209ENST00000583043 DBF4Q9UBU7 674 aaPredicted RBP7.06□□□□□ -1.28
RTTN-209ENST00000583043 PNPLA6Q8IY17 1366 aa7.06□□□□□ -1.28
RTTN-209ENST00000583043 GORABQ5T7V8 394 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 ZNF530Q6P9A1 599 aaPredicted RBP7.05□□□□□ -1.28
RTTN-209ENST00000583043 TICAM2Q86XR7 235 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 SMC3Q9UQE7 1217 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
RTTN-209ENST00000583043 A2ML1A8K2U0 1454 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 CAMSAP1Q5T5Y3 1602 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 APBB1O00213 710 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 IGHDP01880 384 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 TTC22Q5TAA0 569 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 LARP1Q6PKG0 1096 aaKnown RBP7.05□□□□□ -1.28
RTTN-209ENST00000583043 MYO3AQ8NEV4 1616 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 SURF6O75683 361 aaKnown RBP7.05□□□□□ -1.28
RTTN-209ENST00000583043 MX1P20591 662 aa7.05□□□□□ -1.28
RTTN-209ENST00000583043 CHL1O00533 1208 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
RTTN-209ENST00000583043 LTV1Q96GA3 475 aaPredicted RBP7.04□□□□□ -1.28
RTTN-209ENST00000583043 NAP1L5Q96NT1 182 aaPredicted RBP7.04□□□□□ -1.28
RTTN-209ENST00000583043 TAF7LQ5H9L4 462 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 MAP7D2Q96T17 732 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 PPRC1Q5VV67 1664 aaKnown RBP7.04□□□□□ -1.28
RTTN-209ENST00000583043 DIP2CQ9Y2E4 1556 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 ADGRL3Q9HAR2 1447 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 ABCC4O15439 1325 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 DHX16O60231 1041 aaKnown RBP7.04□□□□□ -1.28
RTTN-209ENST00000583043 RIC3Q7Z5B4 369 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 PLEKHF1Q96S99 279 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 SSH2Q76I76 1423 aa7.04□□□□□ -1.28
RTTN-209ENST00000583043 RRS1Q15050 365 aaKnown RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 ESCO1Q5FWF5 840 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 DNTTIP2Q5QJE6 756 aaKnown RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 TEX13AQ9BXU3 409 aaPredicted RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 TRIM35Q9UPQ4 493 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 MAP3K5Q99683 1374 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 TTC41PQ6P2S7 1318 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 FLIIQ13045 1269 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 EIF4A2Q14240 407 aaKnown RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 ZSCAN25Q6NSZ9 544 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 RAD50Q92878 1312 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 CAVIN2O95810 425 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 MCM5P33992 734 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 AKAP4Q5JQC9 854 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 NEXMIFQ5QGS0 1516 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 HMGB1P09429 215 aaKnown RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 EIF2S2P20042 333 aaKnown RBP7.03□□□□□ -1.28
RTTN-209ENST00000583043 ATP8B2P98198 1209 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 DNAAF4Q8WXU2 420 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 CYP46A1Q9Y6A2 500 aa7.03□□□□□ -1.28
RTTN-209ENST00000583043 SPRYD3Q8NCJ5 442 aa7.02□□□□□ -1.28
RTTN-209ENST00000583043 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.28
RTTN-209ENST00000583043 ZBTB7BO15156 539 aaPredicted RBP7.02□□□□□ -1.29
RTTN-209ENST00000583043 FRAT2O75474 233 aaPredicted RBP7.02□□□□□ -1.29
RTTN-209ENST00000583043 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
RTTN-209ENST00000583043 ANO8Q9HCE9 1232 aaPredicted RBP7.02□□□□□ -1.29
RTTN-209ENST00000583043 HMG20BQ9P0W2 317 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 CTNNA3Q9UI47 895 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 FRMPD1Q5SYB0 1578 aa7.02□□□□□ -1.29
RTTN-209ENST00000583043 TECPR2O15040 1411 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms