RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 BTAF1O14981 1849 aa20.65■□□□□ 0.9
ATPAF2-211ENST00000581698 KNSTRNQ9Y448 316 aa20.65■□□□□ 0.9
ATPAF2-211ENST00000581698 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
ATPAF2-211ENST00000581698 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
ATPAF2-211ENST00000581698 APBA3O96018 575 aa20.64■□□□□ 0.89
ATPAF2-211ENST00000581698 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
ATPAF2-211ENST00000581698 PROM2Q8N271 834 aa20.63■□□□□ 0.89
ATPAF2-211ENST00000581698 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
ATPAF2-211ENST00000581698 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
ATPAF2-211ENST00000581698 BCL11BQ9C0K0 894 aaPredicted RBP20.62■□□□□ 0.89
ATPAF2-211ENST00000581698 IGSF1Q8N6C5 1336 aa20.61■□□□□ 0.89
ATPAF2-211ENST00000581698 ACSBG1Q96GR2 724 aa20.6■□□□□ 0.89
ATPAF2-211ENST00000581698 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
ATPAF2-211ENST00000581698 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
ATPAF2-211ENST00000581698 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
ATPAF2-211ENST00000581698 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
ATPAF2-211ENST00000581698 CYP27B1O15528 508 aa20.58■□□□□ 0.89
ATPAF2-211ENST00000581698 DDX54Q8TDD1 881 aaKnown RBP20.58■□□□□ 0.89
ATPAF2-211ENST00000581698 PLSCR1O15162 318 aa20.56■□□□□ 0.88
ATPAF2-211ENST00000581698 IL13P35225 146 aa20.56■□□□□ 0.88
ATPAF2-211ENST00000581698 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
ATPAF2-211ENST00000581698 PSDA5PKW4 1024 aaPredicted RBP20.55■□□□□ 0.88
ATPAF2-211ENST00000581698 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
ATPAF2-211ENST00000581698 LY75O60449 1722 aa20.54■□□□□ 0.88
ATPAF2-211ENST00000581698 MTHFSP49914 203 aa20.54■□□□□ 0.88
ATPAF2-211ENST00000581698 RAPGEF4Q8WZA2 1011 aa20.54■□□□□ 0.88
ATPAF2-211ENST00000581698 ITGB4P16144 1822 aa20.54■□□□□ 0.88
ATPAF2-211ENST00000581698 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
ATPAF2-211ENST00000581698 KDRP35968 1356 aa20.53■□□□□ 0.88
ATPAF2-211ENST00000581698 CASZ1Q86V15 1759 aa20.51■□□□□ 0.87
ATPAF2-211ENST00000581698 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-211ENST00000581698 R3HDM1Q15032 1099 aaKnown RBP20.5■□□□□ 0.87
ATPAF2-211ENST00000581698 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
ATPAF2-211ENST00000581698 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
ATPAF2-211ENST00000581698 LRP5O75197 1615 aa20.49■□□□□ 0.87
ATPAF2-211ENST00000581698 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
ATPAF2-211ENST00000581698 CNGB1Q14028 1251 aaPredicted RBP20.49■□□□□ 0.87
ATPAF2-211ENST00000581698 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
ATPAF2-211ENST00000581698 LRRC4BQ9NT99 713 aa20.49■□□□□ 0.87
ATPAF2-211ENST00000581698 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
ATPAF2-211ENST00000581698 NKX1-1Q15270 411 aaPredicted RBP20.48■□□□□ 0.87
ATPAF2-211ENST00000581698 TUBGCP6Q96RT7 1819 aa20.46■□□□□ 0.87
ATPAF2-211ENST00000581698 KDM6AO15550 1401 aaPredicted RBP20.46■□□□□ 0.87
ATPAF2-211ENST00000581698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATPAF2-211ENST00000581698 PHKG2P15735 406 aa20.45■□□□□ 0.86
ATPAF2-211ENST00000581698 PDGFDQ9GZP0 370 aaPredicted RBP20.45■□□□□ 0.86
ATPAF2-211ENST00000581698 KCNQ4P56696 695 aa20.43■□□□□ 0.86
ATPAF2-211ENST00000581698 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
ATPAF2-211ENST00000581698 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
ATPAF2-211ENST00000581698 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
ATPAF2-211ENST00000581698 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
ATPAF2-211ENST00000581698 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
ATPAF2-211ENST00000581698 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
ATPAF2-211ENST00000581698 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
ATPAF2-211ENST00000581698 HMOX1P09601 288 aa20.39■□□□□ 0.85
ATPAF2-211ENST00000581698 PIGBQ92521 554 aa20.39■□□□□ 0.85
ATPAF2-211ENST00000581698 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
ATPAF2-211ENST00000581698 SCN11AQ9UI33 1791 aa20.39■□□□□ 0.85
ATPAF2-211ENST00000581698 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.85
ATPAF2-211ENST00000581698 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-211ENST00000581698 C5P01031 1676 aa20.38■□□□□ 0.85
ATPAF2-211ENST00000581698 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
ATPAF2-211ENST00000581698 AKT1S1Q96B36 256 aa20.37■□□□□ 0.85
ATPAF2-211ENST00000581698 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
ATPAF2-211ENST00000581698 SLC15A2Q16348 729 aa20.35■□□□□ 0.85
ATPAF2-211ENST00000581698 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
ATPAF2-211ENST00000581698 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
ATPAF2-211ENST00000581698 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
ATPAF2-211ENST00000581698 MRC1P22897 1456 aa20.34■□□□□ 0.85
ATPAF2-211ENST00000581698 COL24A1Q17RW2 1714 aa20.33■□□□□ 0.85
ATPAF2-211ENST00000581698 PLEKHO1Q53GL0 409 aaPredicted RBP20.33■□□□□ 0.85
ATPAF2-211ENST00000581698 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.85
ATPAF2-211ENST00000581698 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
ATPAF2-211ENST00000581698 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
ATPAF2-211ENST00000581698 NBPF14Q5TI25 921 aa20.32■□□□□ 0.84
ATPAF2-211ENST00000581698 SLC4A9Q96Q91 983 aa20.32■□□□□ 0.84
ATPAF2-211ENST00000581698 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
ATPAF2-211ENST00000581698 SLC27A3Q5K4L6 730 aa20.31■□□□□ 0.84
ATPAF2-211ENST00000581698 RSPH6AQ9H0K4 717 aa20.31■□□□□ 0.84
ATPAF2-211ENST00000581698 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
ATPAF2-211ENST00000581698 ZNF831Q5JPB2 1677 aa20.3■□□□□ 0.84
ATPAF2-211ENST00000581698 ATG3Q9NT62 314 aa20.3■□□□□ 0.84
ATPAF2-211ENST00000581698 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
ATPAF2-211ENST00000581698 DCAF5Q96JK2 942 aa20.29■□□□□ 0.84
ATPAF2-211ENST00000581698 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
ATPAF2-211ENST00000581698 LGR6Q9HBX8 967 aa20.29■□□□□ 0.84
ATPAF2-211ENST00000581698 COL5A3P25940 1745 aaPredicted RBP20.29■□□□□ 0.84
ATPAF2-211ENST00000581698 PNPLA7Q6ZV29 1317 aa20.28■□□□□ 0.84
ATPAF2-211ENST00000581698 UBR3Q6ZT12 1888 aa20.28■□□□□ 0.84
ATPAF2-211ENST00000581698 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-211ENST00000581698 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
ATPAF2-211ENST00000581698 CCNL1Q9UK58 526 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-211ENST00000581698 TJP1Q07157 1748 aa20.27■□□□□ 0.84
ATPAF2-211ENST00000581698 ERVV-2B6SEH9 535 aa20.27■□□□□ 0.84
ATPAF2-211ENST00000581698 U2SURPO15042 1029 aaKnown RBP20.27■□□□□ 0.84
ATPAF2-211ENST00000581698 ITPK1Q13572 414 aa20.27■□□□□ 0.84
ATPAF2-211ENST00000581698 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
ATPAF2-211ENST00000581698 PTGER2P43116 358 aa20.26■□□□□ 0.83
ATPAF2-211ENST00000581698 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
ATPAF2-211ENST00000581698 ZEB1P37275 1124 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms