RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.55
PPP4R1-212ENST00000579415 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-212ENST00000579415 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-212ENST00000579415 NSD2O96028 1365 aa11.64□□□□□ -0.55
PPP4R1-212ENST00000579415 HMGB2P26583 209 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-212ENST00000579415 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-212ENST00000579415 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
PPP4R1-212ENST00000579415 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
PPP4R1-212ENST00000579415 ANKRD24Q8TF21 1146 aa11.62□□□□□ -0.55
PPP4R1-212ENST00000579415 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
PPP4R1-212ENST00000579415 NFAT5O94916 1531 aa11.61□□□□□ -0.55
PPP4R1-212ENST00000579415 USP47Q96K76 1375 aa11.61□□□□□ -0.55
PPP4R1-212ENST00000579415 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-212ENST00000579415 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
PPP4R1-212ENST00000579415 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-212ENST00000579415 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
PPP4R1-212ENST00000579415 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
PPP4R1-212ENST00000579415 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
PPP4R1-212ENST00000579415 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
PPP4R1-212ENST00000579415 AMIGO3Q86WK7 504 aa11.57□□□□□ -0.56
PPP4R1-212ENST00000579415 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
PPP4R1-212ENST00000579415 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
PPP4R1-212ENST00000579415 TGFB2P61812 414 aa11.56□□□□□ -0.56
PPP4R1-212ENST00000579415 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
PPP4R1-212ENST00000579415 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
PPP4R1-212ENST00000579415 RRAGCQ9HB90 399 aa11.56□□□□□ -0.56
PPP4R1-212ENST00000579415 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 PLEKHG2Q9H7P9 1386 aa11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 ZCRB1Q8TBF4 217 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 AK7Q96M32 723 aa11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 LY75O60449 1722 aa11.55□□□□□ -0.56
PPP4R1-212ENST00000579415 A0A0G2JLW4 131 aa11.54□□□□□ -0.56
PPP4R1-212ENST00000579415 PHF14O94880 888 aa11.54□□□□□ -0.56
PPP4R1-212ENST00000579415 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
PPP4R1-212ENST00000579415 SSFA2P28290 1259 aa11.53□□□□□ -0.56
PPP4R1-212ENST00000579415 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
PPP4R1-212ENST00000579415 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
PPP4R1-212ENST00000579415 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
PPP4R1-212ENST00000579415 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
PPP4R1-212ENST00000579415 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.56
PPP4R1-212ENST00000579415 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 FCHSD2O94868 740 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 MMP10P09238 476 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 FAM161AQ3B820 660 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.571e-7■■□□□ 14.3
PPP4R1-212ENST00000579415 IP6K1Q92551 441 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
PPP4R1-212ENST00000579415 NME9Q86XW9 330 aa11.51□□□□□ -0.57
PPP4R1-212ENST00000579415 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-212ENST00000579415 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
PPP4R1-212ENST00000579415 DPEP1P16444 411 aa11.5□□□□□ -0.57
PPP4R1-212ENST00000579415 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
PPP4R1-212ENST00000579415 SMARCC1Q92922 1105 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-212ENST00000579415 RNF181Q9P0P0 153 aa11.49□□□□□ -0.57
PPP4R1-212ENST00000579415 FOXN1O15353 648 aa11.48□□□□□ -0.57
PPP4R1-212ENST00000579415 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
PPP4R1-212ENST00000579415 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 C5P01031 1676 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 USP54Q70EL1 1684 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 KCNA3P22001 575 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
PPP4R1-212ENST00000579415 MEGF6O75095 1541 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 NLGN1Q8N2Q7 840 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
PPP4R1-212ENST00000579415 GNPATO15228 680 aa11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 CTCFP49711 727 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 TMF1P82094 1093 aa11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 C4BP0C0L5 1744 aa11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 KIAA1210Q9ULL0 1709 aa11.45□□□□□ -0.58
PPP4R1-212ENST00000579415 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 SIK1P57059 783 aa11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 MKRN1Q9UHC7 482 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-212ENST00000579415 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 HOXC9P31274 260 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 RGS19P49795 217 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 PIGBQ92521 554 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
PPP4R1-212ENST00000579415 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 PCDH11XQ9BZA7 1347 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 PCDH11YQ9BZA8 1340 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 AIDAQ96BJ3 306 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
PPP4R1-212ENST00000579415 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
PPP4R1-212ENST00000579415 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms