RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 BCL11BQ9C0K0 894 aaPredicted RBP31.33■■■□□ 2.61
LIMD2-204ENST00000578297 SHANK3Q9BYB0 1731 aa31.32■■■□□ 2.6
LIMD2-204ENST00000578297 IGSF1Q8N6C5 1336 aa31.31■■■□□ 2.6
LIMD2-204ENST00000578297 CAMKK2Q96RR4 588 aa31.29■■■□□ 2.6
LIMD2-204ENST00000578297 IL13P35225 146 aa31.28■■■□□ 2.6
LIMD2-204ENST00000578297 PTF1AQ7RTS3 328 aa31.27■■■□□ 2.6
LIMD2-204ENST00000578297 PARD3Q8TEW0 1356 aa31.27■■■□□ 2.6
LIMD2-204ENST00000578297 EZH2Q15910 746 aaKnown RBP31.26■■■□□ 2.59
LIMD2-204ENST00000578297 PCDH11XQ9BZA7 1347 aa31.25■■■□□ 2.59
LIMD2-204ENST00000578297 PCDH11YQ9BZA8 1340 aa31.25■■■□□ 2.59
LIMD2-204ENST00000578297 ACSBG1Q96GR2 724 aa31.25■■■□□ 2.59
LIMD2-204ENST00000578297 NHSQ6T4R5 1651 aa31.25■■■□□ 2.59
LIMD2-204ENST00000578297 PKD1L3Q7Z443 1732 aa31.24■■■□□ 2.59
LIMD2-204ENST00000578297 PLSCR1O15162 318 aa31.24■■■□□ 2.59
LIMD2-204ENST00000578297 KCNQ2O43526 872 aa31.24■■■□□ 2.59
LIMD2-204ENST00000578297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.24■■■□□ 2.59
LIMD2-204ENST00000578297 PLEKHG2Q9H7P9 1386 aa31.24■■■□□ 2.59
LIMD2-204ENST00000578297 DDX10Q13206 875 aaKnown RBP31.22■■■□□ 2.59
LIMD2-204ENST00000578297 SPG7Q9UQ90 795 aa31.22■■■□□ 2.59
LIMD2-204ENST00000578297 CYP27B1O15528 508 aa31.2■■■□□ 2.59
LIMD2-204ENST00000578297 DIAPH1O60610 1272 aaKnown RBP31.2■■■□□ 2.59
LIMD2-204ENST00000578297 RGPD3A6NKT7 1758 aaPredicted RBP31.2■■■□□ 2.58
LIMD2-204ENST00000578297 RGPD4Q7Z3J3 1758 aa31.2■■■□□ 2.58
LIMD2-204ENST00000578297 KAT6BQ8WYB5 2073 aa31.18■■■□□ 2.58
LIMD2-204ENST00000578297 PPP2R1AP30153 589 aa31.18■■■□□ 2.58
LIMD2-204ENST00000578297 KDRP35968 1356 aa31.17■■■□□ 2.58
LIMD2-204ENST00000578297 COL3A1P02461 1466 aaPredicted RBP31.17■■■□□ 2.58
LIMD2-204ENST00000578297 SULT6B1Q6IMI4 303 aa31.17■■■□□ 2.58
LIMD2-204ENST00000578297 AEBP1Q8IUX7 1158 aa31.17■■■□□ 2.58
LIMD2-204ENST00000578297 RREB1Q92766 1687 aa31.16■■■□□ 2.58
LIMD2-204ENST00000578297 DOT1LQ8TEK3 1739 aa31.15■■■□□ 2.58
LIMD2-204ENST00000578297 PRIM1P49642 420 aaKnown RBP31.14■■■□□ 2.58
LIMD2-204ENST00000578297 BTAF1O14981 1849 aa31.13■■■□□ 2.57
LIMD2-204ENST00000578297 NKX1-1Q15270 411 aaPredicted RBP31.13■■■□□ 2.57
LIMD2-204ENST00000578297 CFAP53Q96M91 514 aa31.13■■■□□ 2.57
LIMD2-204ENST00000578297 PLEKHO1Q53GL0 409 aaPredicted RBP31.12■■■□□ 2.57
LIMD2-204ENST00000578297 AMOTQ4VCS5 1084 aa31.11■■■□□ 2.57
LIMD2-204ENST00000578297 IFNL2Q8IZJ0 200 aa31.11■■■□□ 2.57
LIMD2-204ENST00000578297 SYTL4Q96C24 671 aaPredicted RBP31.11■■■□□ 2.57
LIMD2-204ENST00000578297 NUP188Q5SRE5 1749 aa31.1■■■□□ 2.57
LIMD2-204ENST00000578297 PHKG2P15735 406 aa31.1■■■□□ 2.57
LIMD2-204ENST00000578297 PROM2Q8N271 834 aa31.09■■■□□ 2.57
LIMD2-204ENST00000578297 HMOX1P09601 288 aa31.07■■■□□ 2.56
LIMD2-204ENST00000578297 TXNRD1Q16881 649 aa31.06■■■□□ 2.56
LIMD2-204ENST00000578297 RALBP1Q15311 655 aa31.05■■■□□ 2.56
LIMD2-204ENST00000578297 U2SURPO15042 1029 aaKnown RBP31.04■■■□□ 2.56
LIMD2-204ENST00000578297 TOGARAM1Q9Y4F4 1720 aa31.04■■■□□ 2.56
LIMD2-204ENST00000578297 NBPF14Q5TI25 921 aa31.03■■■□□ 2.56
LIMD2-204ENST00000578297 ZNF530Q6P9A1 599 aaPredicted RBP31.03■■■□□ 2.56
LIMD2-204ENST00000578297 ZNF316A6NFI3 1004 aaPredicted RBP31.01■■■□□ 2.55
LIMD2-204ENST00000578297 HSP90AB1P08238 724 aaKnown RBP31.01■■■□□ 2.55
LIMD2-204ENST00000578297 NUDCQ9Y266 331 aa31.01■■■□□ 2.55
LIMD2-204ENST00000578297 MPRIPQ6WCQ1 1025 aa31■■■□□ 2.55
LIMD2-204ENST00000578297 ITGB4P16144 1822 aa31■■■□□ 2.55
LIMD2-204ENST00000578297 PSDA5PKW4 1024 aaPredicted RBP30.98■■■□□ 2.55
LIMD2-204ENST00000578297 R3HDM1Q15032 1099 aaKnown RBP30.98■■■□□ 2.55
LIMD2-204ENST00000578297 C1orf141Q5JVX7 400 aa30.98■■■□□ 2.55
LIMD2-204ENST00000578297 DCAF5Q96JK2 942 aa30.98■■■□□ 2.55
LIMD2-204ENST00000578297 SLC27A3Q5K4L6 730 aa30.95■■■□□ 2.55
LIMD2-204ENST00000578297 PIGBQ92521 554 aa30.95■■■□□ 2.55
LIMD2-204ENST00000578297 ERVV-2B6SEH9 535 aa30.94■■■□□ 2.54
LIMD2-204ENST00000578297 LY75O60449 1722 aa30.94■■■□□ 2.54
LIMD2-204ENST00000578297 AKAP4Q5JQC9 854 aa30.94■■■□□ 2.54
LIMD2-204ENST00000578297 TMOD3Q9NYL9 352 aa30.94■■■□□ 2.54
LIMD2-204ENST00000578297 LRRC4BQ9NT99 713 aa30.93■■■□□ 2.54
LIMD2-204ENST00000578297 KDM6AO15550 1401 aaPredicted RBP30.92■■■□□ 2.54
LIMD2-204ENST00000578297 U2AF1L5P0DN76 240 aaPredicted RBP30.92■■■□□ 2.54
LIMD2-204ENST00000578297 U2AF1Q01081 240 aaKnown RBP eCLIP30.92■■■□□ 2.54
LIMD2-204ENST00000578297 MTHFSDQ2M296 383 aaKnown RBP30.92■■■□□ 2.54
LIMD2-204ENST00000578297 ANO8Q9HCE9 1232 aaPredicted RBP30.92■■■□□ 2.54
LIMD2-204ENST00000578297 RSPH6AQ9H0K4 717 aa30.91■■■□□ 2.54
LIMD2-204ENST00000578297 MYBBP1AQ9BQG0 1328 aaKnown RBP30.91■■■□□ 2.54
LIMD2-204ENST00000578297 SMARCC1Q92922 1105 aaPredicted RBP30.9■■■□□ 2.54
LIMD2-204ENST00000578297 FCHSD2O94868 740 aa30.89■■■□□ 2.54
LIMD2-204ENST00000578297 PALLDQ8WX93 1383 aa30.89■■■□□ 2.54
LIMD2-204ENST00000578297 PAPPAQ13219 1627 aa30.88■■■□□ 2.53
LIMD2-204ENST00000578297 STK32BQ9NY57 414 aa30.88■■■□□ 2.53
LIMD2-204ENST00000578297 PRKAR2BP31323 418 aa30.87■■■□□ 2.53
LIMD2-204ENST00000578297 PRKRIP1Q9H875 184 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-204ENST00000578297 CCNL1Q9UK58 526 aaPredicted RBP30.87■■■□□ 2.53
LIMD2-204ENST00000578297 SLC15A2Q16348 729 aa30.86■■■□□ 2.53
LIMD2-204ENST00000578297 CABP4P57796 275 aa30.85■■■□□ 2.53
LIMD2-204ENST00000578297 GAS2L2Q8NHY3 880 aa30.85■■■□□ 2.53
LIMD2-204ENST00000578297 SCN11AQ9UI33 1791 aa30.84■■■□□ 2.53
LIMD2-204ENST00000578297 KCNQ4P56696 695 aa30.84■■■□□ 2.53
LIMD2-204ENST00000578297 ASAP1Q9ULH1 1129 aa30.84■■■□□ 2.53
LIMD2-204ENST00000578297 SRCAPQ6ZRS2 3230 aa30.83■■■□□ 2.53
LIMD2-204ENST00000578297 PHACTR3Q96KR7 559 aa30.83■■■□□ 2.53
LIMD2-204ENST00000578297 ATG3Q9NT62 314 aa30.82■■■□□ 2.52
LIMD2-204ENST00000578297 LGR6Q9HBX8 967 aa30.81■■■□□ 2.52
LIMD2-204ENST00000578297 RNMTO43148 476 aaKnown RBP30.8■■■□□ 2.52
LIMD2-204ENST00000578297 HMGB2P26583 209 aaKnown RBP30.8■■■□□ 2.52
LIMD2-204ENST00000578297 NFATC2IPQ8NCF5 419 aa30.8■■■□□ 2.52
LIMD2-204ENST00000578297 AKT1S1Q96B36 256 aa30.8■■■□□ 2.52
LIMD2-204ENST00000578297 ADAMTS7Q9UKP4 1686 aa30.79■■■□□ 2.52
LIMD2-204ENST00000578297 ZNF827Q17R98 1081 aa30.79■■■□□ 2.52
LIMD2-204ENST00000578297 MAP3K5Q99683 1374 aa30.79■■■□□ 2.52
LIMD2-204ENST00000578297 GNAT3A8MTJ3 354 aa30.78■■■□□ 2.52
LIMD2-204ENST00000578297 VIRMAQ69YN4 1812 aaKnown RBP30.77■■■□□ 2.52
LIMD2-204ENST00000578297 LOC102724428A0A0B4J2F2 783 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms