RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
RPAIN-215ENST00000575112 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 ZDHHC9Q9Y397 364 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 ABCC1P33527 1531 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 MTHFSDQ2M296 383 aaKnown RBP10.43□□□□□ -0.74
RPAIN-215ENST00000575112 BMP2KLQ5H9B9 411 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 LMBRD1Q9NUN5 540 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 PPFIA3O75145 1194 aa10.43□□□□□ -0.74
RPAIN-215ENST00000575112 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
RPAIN-215ENST00000575112 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
RPAIN-215ENST00000575112 SYCE3A1L190 88 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 MYL6BP14649 208 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 NLRP2Q9NX02 1062 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 HMMRO75330 724 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 C17orf53Q8N3J3 647 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-215ENST00000575112 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-215ENST00000575112 TMEM63CQ9P1W3 806 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 MSNP26038 577 aaKnown RBP10.42□□□□□ -0.74
RPAIN-215ENST00000575112 IL13P35225 146 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-215ENST00000575112 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
RPAIN-215ENST00000575112 CDC45O75419 566 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 PTMAP06454 111 aaKnown RBP10.41□□□□□ -0.74
RPAIN-215ENST00000575112 METP08581 1390 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 OFD1O75665 1012 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 CCDC173Q0VFZ6 552 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
RPAIN-215ENST00000575112 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 TTC21BQ7Z4L5 1316 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 ZMYM3Q14202 1370 aa10.41□□□□□ -0.74
RPAIN-215ENST00000575112 KDM4AO75164 1064 aa10.4□□□□□ -0.74
RPAIN-215ENST00000575112 AAMPQ13685 434 aa10.4□□□□□ -0.74
RPAIN-215ENST00000575112 CCDC85AQ96PX6 553 aaPredicted RBP10.4□□□□□ -0.74
RPAIN-215ENST00000575112 LRRFIP2Q9Y608 721 aaKnown RBP10.4□□□□□ -0.74
RPAIN-215ENST00000575112 PLEKHM2Q8IWE5 1019 aa10.4□□□□□ -0.74
RPAIN-215ENST00000575112 SHROOM2Q13796 1616 aa10.4□□□□□ -0.74
RPAIN-215ENST00000575112 UQCRHLA0A096LP55 91 aa10.4□□□□□ -0.75
RPAIN-215ENST00000575112 UQCRHP07919 91 aa10.4□□□□□ -0.75
RPAIN-215ENST00000575112 UBTFL1P0CB47 393 aaPredicted RBP10.4□□□□□ -0.75
RPAIN-215ENST00000575112 EYA1Q99502 592 aa10.4□□□□□ -0.75
RPAIN-215ENST00000575112 PDCL3Q9H2J4 239 aa10.4□□□□□ -0.75
RPAIN-215ENST00000575112 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.75
RPAIN-215ENST00000575112 IFT57Q9NWB7 429 aa10.4□□□□□ -0.75
RPAIN-215ENST00000575112 FGD1P98174 961 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 KCNA6P17658 529 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 TULP4Q9NRJ4 1543 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 ZNF530Q6P9A1 599 aaPredicted RBP10.39□□□□□ -0.75
RPAIN-215ENST00000575112 PRDM4Q9UKN5 801 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
RPAIN-215ENST00000575112 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
RPAIN-215ENST00000575112 RIMS2Q9UQ26 1411 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
RPAIN-215ENST00000575112 SRGAP3O43295 1099 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 SDSP20132 328 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 GCC1Q96CN9 775 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 ZHX1Q9UKY1 873 aaPredicted RBP10.38□□□□□ -0.75
RPAIN-215ENST00000575112 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 SKOR2Q2VWA4 1001 aaPredicted RBP10.38□□□□□ -0.75
RPAIN-215ENST00000575112 PRR36Q9H6K5 1346 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 TET3O43151 1660 aa10.38□□□□□ -0.75
RPAIN-215ENST00000575112 KIF1BO60333 1816 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 TPM2P07951 284 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 KCNQ3O43525 872 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 ST18O60284 1047 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 GNAI2P04899 355 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 C1orf141Q5JVX7 400 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
RPAIN-215ENST00000575112 CWC27Q6UX04 472 aaKnown RBP10.37□□□□□ -0.75
RPAIN-215ENST00000575112 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
RPAIN-215ENST00000575112 MROH1Q8NDA8 1641 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-215ENST00000575112 FLIIQ13045 1269 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 TCEANC2Q96MN5 208 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 LGR6Q9HBX8 967 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 CPA1P15085 419 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
RPAIN-215ENST00000575112 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 KIAA1210Q9ULL0 1709 aa10.36□□□□□ -0.75
RPAIN-215ENST00000575112 PPRC1Q5VV67 1664 aaKnown RBP10.36□□□□□ -0.75
RPAIN-215ENST00000575112 COL3A1P02461 1466 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-215ENST00000575112 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-215ENST00000575112 MYOM2P54296 1465 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 ABCC11Q96J66 1382 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 IFT172Q9UG01 1749 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 PI4KAP2A4QPH2 592 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 MCCP23508 829 aa10.35□□□□□ -0.75
RPAIN-215ENST00000575112 PI4KAP1Q8N8J0 262 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms