RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
NDE1-210ENST00000574163 RREB1Q92766 1687 aa13.31□□□□□ -0.28
NDE1-210ENST00000574163 EXOC5O00471 708 aa13.31□□□□□ -0.28
NDE1-210ENST00000574163 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
NDE1-210ENST00000574163 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
NDE1-210ENST00000574163 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
NDE1-210ENST00000574163 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
NDE1-210ENST00000574163 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
NDE1-210ENST00000574163 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
NDE1-210ENST00000574163 BAG6P46379 1132 aa13.29□□□□□ -0.28
NDE1-210ENST00000574163 RAPGEF4Q8WZA2 1011 aa13.29□□□□□ -0.28
NDE1-210ENST00000574163 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
NDE1-210ENST00000574163 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
NDE1-210ENST00000574163 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
NDE1-210ENST00000574163 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
NDE1-210ENST00000574163 CC2D1BQ5T0F9 858 aaKnown RBP13.27□□□□□ -0.29
NDE1-210ENST00000574163 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
NDE1-210ENST00000574163 BTAF1O14981 1849 aa13.27□□□□□ -0.29
NDE1-210ENST00000574163 TRIM37O94972 964 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
NDE1-210ENST00000574163 KDRP35968 1356 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 EYA1Q99502 592 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
NDE1-210ENST00000574163 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
NDE1-210ENST00000574163 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
NDE1-210ENST00000574163 MTHFSP49914 203 aa13.24□□□□□ -0.29
NDE1-210ENST00000574163 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
NDE1-210ENST00000574163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
NDE1-210ENST00000574163 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
NDE1-210ENST00000574163 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
NDE1-210ENST00000574163 APBA3O96018 575 aa13.22□□□□□ -0.29
NDE1-210ENST00000574163 IL13P35225 146 aa13.22□□□□□ -0.29
NDE1-210ENST00000574163 PLSCR1O15162 318 aa13.21□□□□□ -0.29
NDE1-210ENST00000574163 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
NDE1-210ENST00000574163 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
NDE1-210ENST00000574163 ITGB4P16144 1822 aa13.2□□□□□ -0.3
NDE1-210ENST00000574163 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
NDE1-210ENST00000574163 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
NDE1-210ENST00000574163 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
NDE1-210ENST00000574163 LY75O60449 1722 aa13.19□□□□□ -0.3
NDE1-210ENST00000574163 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
NDE1-210ENST00000574163 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
NDE1-210ENST00000574163 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
NDE1-210ENST00000574163 CYP27B1O15528 508 aa13.18□□□□□ -0.3
NDE1-210ENST00000574163 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
NDE1-210ENST00000574163 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
NDE1-210ENST00000574163 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
NDE1-210ENST00000574163 EZH2Q15910 746 aaKnown RBP13.17□□□□□ -0.3
NDE1-210ENST00000574163 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
NDE1-210ENST00000574163 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 KCNQ2O43526 872 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
NDE1-210ENST00000574163 PHKG2P15735 406 aa13.15□□□□□ -0.3
NDE1-210ENST00000574163 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
NDE1-210ENST00000574163 RALBP1Q15311 655 aa13.15□□□□□ -0.3
NDE1-210ENST00000574163 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
NDE1-210ENST00000574163 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
NDE1-210ENST00000574163 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
NDE1-210ENST00000574163 LRP5O75197 1615 aa13.14□□□□□ -0.31
NDE1-210ENST00000574163 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
NDE1-210ENST00000574163 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
NDE1-210ENST00000574163 MRC1P22897 1456 aa13.14□□□□□ -0.31
NDE1-210ENST00000574163 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
NDE1-210ENST00000574163 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
NDE1-210ENST00000574163 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
NDE1-210ENST00000574163 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
NDE1-210ENST00000574163 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
NDE1-210ENST00000574163 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
NDE1-210ENST00000574163 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
NDE1-210ENST00000574163 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
NDE1-210ENST00000574163 C5P01031 1676 aa13.12□□□□□ -0.31
NDE1-210ENST00000574163 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
NDE1-210ENST00000574163 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
NDE1-210ENST00000574163 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
NDE1-210ENST00000574163 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
NDE1-210ENST00000574163 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
NDE1-210ENST00000574163 HMOX1P09601 288 aa13.1□□□□□ -0.31
NDE1-210ENST00000574163 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
NDE1-210ENST00000574163 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 PROM2Q8N271 834 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
NDE1-210ENST00000574163 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
NDE1-210ENST00000574163 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
NDE1-210ENST00000574163 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
NDE1-210ENST00000574163 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
NDE1-210ENST00000574163 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms