RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MSH6P52701 1360 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-212ENST00000573126 MEIS3Q99687 375 aa13.97□□□□□ -0.17
RPAIN-212ENST00000573126 MTHFSDQ2M296 383 aaKnown RBP13.96□□□□□ -0.17
RPAIN-212ENST00000573126 ATP10DQ9P241 1426 aa13.96□□□□□ -0.18
RPAIN-212ENST00000573126 CDC45O75419 566 aa13.96□□□□□ -0.18
RPAIN-212ENST00000573126 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.18
RPAIN-212ENST00000573126 NGDNQ8NEJ9 315 aaKnown RBP13.96□□□□□ -0.18
RPAIN-212ENST00000573126 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 HSP90AA1P07900 732 aaKnown RBP13.95□□□□□ -0.18
RPAIN-212ENST00000573126 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-212ENST00000573126 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 ANKRD44Q8N8A2 993 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 EID1Q9Y6B2 187 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 USP31Q70CQ4 1352 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 SMARCA5O60264 1052 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-212ENST00000573126 DDIT3P35638 169 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 SLC4A10Q6U841 1118 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
RPAIN-212ENST00000573126 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
RPAIN-212ENST00000573126 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 F6X3S4 739 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 TRAK2O60296 914 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 CRB1P82279 1406 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 RTL1A6NKG5 1358 aa13.94□□□□□ -0.18
RPAIN-212ENST00000573126 AMPHP49418 695 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 G2E3Q7L622 706 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 PTPRCP08575 1304 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 NUTM2GQ5VZR2 741 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
RPAIN-212ENST00000573126 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-212ENST00000573126 EYA1Q99502 592 aa13.92□□□□□ -0.18
RPAIN-212ENST00000573126 TOPAZ1Q8N9V7 1692 aa13.92□□□□□ -0.18
RPAIN-212ENST00000573126 TNPO1Q92973 898 aaKnown RBP13.92□□□□□ -0.18
RPAIN-212ENST00000573126 FLT4P35916 1363 aa13.92□□□□□ -0.18
RPAIN-212ENST00000573126 K7ELQ4 463 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-212ENST00000573126 ARHGEF10O15013 1369 aa13.91□□□□□ -0.18
RPAIN-212ENST00000573126 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
RPAIN-212ENST00000573126 L1TD1Q5T7N2 865 aaKnown RBP13.91□□□□□ -0.18
RPAIN-212ENST00000573126 NLRP6P59044 892 aa13.91□□□□□ -0.18
RPAIN-212ENST00000573126 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
RPAIN-212ENST00000573126 GOLGA6L3A6NEY3 463 aa13.9□□□□□ -0.18
RPAIN-212ENST00000573126 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
RPAIN-212ENST00000573126 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
RPAIN-212ENST00000573126 SDSP20132 328 aa13.9□□□□□ -0.18
RPAIN-212ENST00000573126 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
RPAIN-212ENST00000573126 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
RPAIN-212ENST00000573126 GAS2L2Q8NHY3 880 aa13.89□□□□□ -0.19
RPAIN-212ENST00000573126 NALCNQ8IZF0 1738 aa13.89□□□□□ -0.19
RPAIN-212ENST00000573126 XRCC6P12956 609 aaKnown RBP eCLIP13.89□□□□□ -0.19
RPAIN-212ENST00000573126 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-212ENST00000573126 IGSF1Q8N6C5 1336 aa13.89□□□□□ -0.19
RPAIN-212ENST00000573126 KDRP35968 1356 aa13.88□□□□□ -0.19
RPAIN-212ENST00000573126 RAB3GAP1Q15042 981 aa13.88□□□□□ -0.19
RPAIN-212ENST00000573126 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-212ENST00000573126 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
RPAIN-212ENST00000573126 TBX22Q9Y458 520 aa13.88□□□□□ -0.19
RPAIN-212ENST00000573126 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-212ENST00000573126 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
RPAIN-212ENST00000573126 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
RPAIN-212ENST00000573126 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
RPAIN-212ENST00000573126 GBP4Q96PP9 640 aa13.86□□□□□ -0.19
RPAIN-212ENST00000573126 HMMRO75330 724 aa13.86□□□□□ -0.19
RPAIN-212ENST00000573126 KCNA6P17658 529 aa13.86□□□□□ -0.19
RPAIN-212ENST00000573126 FKBP5Q13451 457 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-212ENST00000573126 TSHZ3Q63HK5 1081 aa13.86□□□□□ -0.19
RPAIN-212ENST00000573126 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
RPAIN-212ENST00000573126 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
RPAIN-212ENST00000573126 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
RPAIN-212ENST00000573126 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-212ENST00000573126 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
RPAIN-212ENST00000573126 SSFA2P28290 1259 aa13.85□□□□□ -0.19
RPAIN-212ENST00000573126 HOXC9P31274 260 aa13.85□□□□□ -0.19
RPAIN-212ENST00000573126 FLIIQ13045 1269 aa13.85□□□□□ -0.19
RPAIN-212ENST00000573126 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 RABEP1Q15276 862 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 USHBP1Q8N6Y0 703 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 GNAI2P04899 355 aa13.84□□□□□ -0.19
RPAIN-212ENST00000573126 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-212ENST00000573126 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
RPAIN-212ENST00000573126 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
RPAIN-212ENST00000573126 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-212ENST00000573126 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-212ENST00000573126 PDE1AP54750 535 aa13.83□□□□□ -0.2
RPAIN-212ENST00000573126 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
RPAIN-212ENST00000573126 SLIT1O75093 1534 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 PIK3C2AO00443 1686 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
RPAIN-212ENST00000573126 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
RPAIN-212ENST00000573126 REC8O95072 547 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms