RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 SOX12O15370 315 aa20.55■□□□□ 0.88
POLR2A-201ENST00000572844 MCM10Q7L590 875 aa20.55■□□□□ 0.88
POLR2A-201ENST00000572844 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
POLR2A-201ENST00000572844 MTHFSDQ2M296 383 aaKnown RBP20.54■□□□□ 0.88
POLR2A-201ENST00000572844 HOXC9P31274 260 aa20.54■□□□□ 0.88
POLR2A-201ENST00000572844 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
POLR2A-201ENST00000572844 PHF8Q9UPP1 1060 aa20.54■□□□□ 0.88
POLR2A-201ENST00000572844 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
POLR2A-201ENST00000572844 INTS3Q68E01 1043 aaKnown RBP20.53■□□□□ 0.88
POLR2A-201ENST00000572844 CACNA1FO60840 1977 aa20.52■□□□□ 0.88
POLR2A-201ENST00000572844 PTPRCP08575 1304 aa20.52■□□□□ 0.88
POLR2A-201ENST00000572844 RTF1Q92541 710 aaKnown RBP20.52■□□□□ 0.88
POLR2A-201ENST00000572844 RGS12O14924 1447 aa20.52■□□□□ 0.88
POLR2A-201ENST00000572844 ABTB2Q8N961 1025 aa20.52■□□□□ 0.87
POLR2A-201ENST00000572844 TBC1D32Q96NH3 1257 aa20.52■□□□□ 0.87
POLR2A-201ENST00000572844 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
POLR2A-201ENST00000572844 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
POLR2A-201ENST00000572844 NFAT5O94916 1531 aa20.5■□□□□ 0.87
POLR2A-201ENST00000572844 BECN1Q14457 450 aa20.48■□□□□ 0.87
POLR2A-201ENST00000572844 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
POLR2A-201ENST00000572844 BABAM1Q9NWV8 329 aa20.47■□□□□ 0.87
POLR2A-201ENST00000572844 FOXO3O43524 673 aa20.47■□□□□ 0.87
POLR2A-201ENST00000572844 SLC4A3P48751 1232 aa20.46■□□□□ 0.87
POLR2A-201ENST00000572844 SIRT2Q8IXJ6 389 aa20.46■□□□□ 0.87
POLR2A-201ENST00000572844 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
POLR2A-201ENST00000572844 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
POLR2A-201ENST00000572844 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.86
POLR2A-201ENST00000572844 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
POLR2A-201ENST00000572844 IP6K1Q92551 441 aa20.44■□□□□ 0.86
POLR2A-201ENST00000572844 MAP3K5Q99683 1374 aa20.44■□□□□ 0.86
POLR2A-201ENST00000572844 BMP2KLQ5H9B9 411 aa20.44■□□□□ 0.86
POLR2A-201ENST00000572844 LNPKQ9C0E8 428 aa20.44■□□□□ 0.86
POLR2A-201ENST00000572844 NUTM2GQ5VZR2 741 aa20.43■□□□□ 0.86
POLR2A-201ENST00000572844 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
POLR2A-201ENST00000572844 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
POLR2A-201ENST00000572844 N4BP2Q86UW6 1770 aaPredicted RBP20.43■□□□□ 0.86
POLR2A-201ENST00000572844 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
POLR2A-201ENST00000572844 RPAP2Q8IXW5 612 aaPredicted RBP20.42■□□□□ 0.86
POLR2A-201ENST00000572844 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
POLR2A-201ENST00000572844 DCTPP1Q9H773 170 aa20.41■□□□□ 0.86
POLR2A-201ENST00000572844 KIF1AQ12756 1690 aa20.41■□□□□ 0.86
POLR2A-201ENST00000572844 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
POLR2A-201ENST00000572844 SLIT3O75094 1523 aa20.41■□□□□ 0.86
POLR2A-201ENST00000572844 MSH6P52701 1360 aa20.4■□□□□ 0.86
POLR2A-201ENST00000572844 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
POLR2A-201ENST00000572844 DEKP35659 375 aaKnown RBP20.4■□□□□ 0.86
POLR2A-201ENST00000572844 PSME1Q06323 249 aa20.4■□□□□ 0.86
POLR2A-201ENST00000572844 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.86
POLR2A-201ENST00000572844 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.85
POLR2A-201ENST00000572844 C22orf23Q9BZE7 217 aa20.39■□□□□ 0.85
POLR2A-201ENST00000572844 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
POLR2A-201ENST00000572844 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
POLR2A-201ENST00000572844 CCT4P50991 539 aaKnown RBP20.38■□□□□ 0.85
POLR2A-201ENST00000572844 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
POLR2A-201ENST00000572844 MED1Q15648 1581 aaPredicted RBP20.37■□□□□ 0.85
POLR2A-201ENST00000572844 RGPD2P0DJD1 1756 aa20.37■□□□□ 0.85
POLR2A-201ENST00000572844 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
POLR2A-201ENST00000572844 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
POLR2A-201ENST00000572844 MST1RQ04912 1400 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
POLR2A-201ENST00000572844 CEMIPQ8WUJ3 1361 aa20.35■□□□□ 0.85
POLR2A-201ENST00000572844 CEP85Q6P2H3 762 aa20.35■□□□□ 0.85
POLR2A-201ENST00000572844 KDM3BQ7LBC6 1761 aa20.35■□□□□ 0.85
POLR2A-201ENST00000572844 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
POLR2A-201ENST00000572844 LTV1Q96GA3 475 aaPredicted RBP20.34■□□□□ 0.85
POLR2A-201ENST00000572844 EIF5BO60841 1220 aaKnown RBP20.34■□□□□ 0.85
POLR2A-201ENST00000572844 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
POLR2A-201ENST00000572844 RBM33Q96EV2 1170 aaKnown RBP20.33■□□□□ 0.85
POLR2A-201ENST00000572844 PXDNLA1KZ92 1463 aa20.33■□□□□ 0.84
POLR2A-201ENST00000572844 G2E3Q7L622 706 aa20.33■□□□□ 0.84
POLR2A-201ENST00000572844 TBC1D2Q9BYX2 928 aa20.33■□□□□ 0.84
POLR2A-201ENST00000572844 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
POLR2A-201ENST00000572844 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
POLR2A-201ENST00000572844 MEIS3Q99687 375 aa20.31■□□□□ 0.84
POLR2A-201ENST00000572844 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
POLR2A-201ENST00000572844 HMMRO75330 724 aa20.3■□□□□ 0.84
POLR2A-201ENST00000572844 PLEKHM2Q8IWE5 1019 aa20.3■□□□□ 0.84
POLR2A-201ENST00000572844 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
POLR2A-201ENST00000572844 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 OVOS2A0A0G2JMS6 1433 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 C1orf167Q5SNV9 1468 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 FLIIQ13045 1269 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 ORAI2Q96SN7 254 aa20.29■□□□□ 0.84
POLR2A-201ENST00000572844 GCP02774 474 aa20.28■□□□□ 0.84
POLR2A-201ENST00000572844 HOXB7P09629 217 aa20.28■□□□□ 0.84
POLR2A-201ENST00000572844 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
POLR2A-201ENST00000572844 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
POLR2A-201ENST00000572844 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
POLR2A-201ENST00000572844 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
POLR2A-201ENST00000572844 PLEKHO1Q53GL0 409 aaPredicted RBP20.26■□□□□ 0.83
POLR2A-201ENST00000572844 C19orf44Q9H6X5 657 aa20.26■□□□□ 0.83
POLR2A-201ENST00000572844 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
POLR2A-201ENST00000572844 CDC45O75419 566 aa20.26■□□□□ 0.83
POLR2A-201ENST00000572844 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
POLR2A-201ENST00000572844 F6X3S4 739 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms