RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 EVA1CP58658 441 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 NLRP6P59044 892 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 TPM3P06753 285 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
PCDHGA4-201ENST00000571252 NUCB1Q02818 461 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 CCDC73Q6ZRK6 1079 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 MYOM2P54296 1465 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 PDCP20941 246 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 G3V3G9 751 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA4-201ENST00000571252 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 A0A1W2PP64 1363 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 PSMA5P28066 241 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 SBNO2Q9Y2G9 1366 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 IL16Q14005 1332 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
PCDHGA4-201ENST00000571252 FOSBP53539 338 aa13.33□□□□□ -0.27
PCDHGA4-201ENST00000571252 NSD2O96028 1365 aa13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 KIF1BO60333 1816 aa13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 FSD1Q9BTV5 496 aa13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA4-201ENST00000571252 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 TOMM22Q9NS69 142 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 CPLX1O14810 134 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 TNNT3P45378 269 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 MCM10Q7L590 875 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 PSME1Q06323 249 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 SNX21Q969T3 373 aa13.32□□□□□ -0.28
PCDHGA4-201ENST00000571252 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 NME9Q86XW9 330 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
PCDHGA4-201ENST00000571252 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 CREBRFQ8IUR6 639 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 CEP152O94986 1710 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 MX1P20591 662 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 KRT85P78386 507 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 IQGAP1P46940 1657 aa13.3□□□□□ -0.28
PCDHGA4-201ENST00000571252 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 LRRFIP1Q32MZ4 808 aaKnown RBP13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 LARP1BQ659C4 914 aaKnown RBP13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
PCDHGA4-201ENST00000571252 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 F6X3S4 739 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 ARHGAP45Q92619 1136 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 ZBTB40Q9NUA8 1239 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 CLSTN1O94985 981 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 ATF3P18847 181 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA4-201ENST00000571252 HIP1O00291 1037 aa13.27□□□□□ -0.28
PCDHGA4-201ENST00000571252 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.28
PCDHGA4-201ENST00000571252 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.28
PCDHGA4-201ENST00000571252 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 JAKMIP1Q96N16 626 aaKnown RBP13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 TNMDQ9H2S6 317 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 KINO60870 393 aaKnown RBP13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 NEUROD6Q96NK8 337 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.29
PCDHGA4-201ENST00000571252 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
PCDHGA4-201ENST00000571252 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms