RNA–Protein interactions for RNA: ENST00000569953.2

CACNA1H-208, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 4

Gene CACNA1H, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-208ENST00000569953 RGPD2P0DJD1 1756 aa27.25■■□□□ 1.95
CACNA1H-208ENST00000569953 PLEKHO1Q53GL0 409 aaPredicted RBP27.25■■□□□ 1.95
CACNA1H-208ENST00000569953 ZCRB1Q8TBF4 217 aaKnown RBP27.24■■□□□ 1.95
CACNA1H-208ENST00000569953 OVOS2A0A0G2JMS6 1433 aa27.23■■□□□ 1.95
CACNA1H-208ENST00000569953 PARP4Q9UKK3 1724 aaKnown RBP27.22■■□□□ 1.95
CACNA1H-208ENST00000569953 THSD7AQ9UPZ6 1657 aa27.22■■□□□ 1.95
CACNA1H-208ENST00000569953 HMOX1P09601 288 aa27.21■■□□□ 1.95
CACNA1H-208ENST00000569953 WNK3Q9BYP7 1800 aa27.2■■□□□ 1.95
CACNA1H-208ENST00000569953 KRT27Q7Z3Y8 459 aa27.2■■□□□ 1.94
CACNA1H-208ENST00000569953 TNS2Q63HR2 1409 aa27.19■■□□□ 1.94
CACNA1H-208ENST00000569953 PCDH11XQ9BZA7 1347 aa27.18■■□□□ 1.94
CACNA1H-208ENST00000569953 PCDH11YQ9BZA8 1340 aa27.18■■□□□ 1.94
CACNA1H-208ENST00000569953 RGS12O14924 1447 aa27.18■■□□□ 1.94
CACNA1H-208ENST00000569953 AEBP1Q8IUX7 1158 aa27.18■■□□□ 1.94
CACNA1H-208ENST00000569953 RSPH6AQ9H0K4 717 aa27.18■■□□□ 1.94
CACNA1H-208ENST00000569953 MEGF6O75095 1541 aa27.17■■□□□ 1.94
CACNA1H-208ENST00000569953 GAS2L2Q8NHY3 880 aa27.16■■□□□ 1.94
CACNA1H-208ENST00000569953 PNISRQ8TF01 805 aaKnown RBP27.16■■□□□ 1.94
CACNA1H-208ENST00000569953 HSP90AB1P08238 724 aaKnown RBP27.15■■□□□ 1.94
CACNA1H-208ENST00000569953 PRKAR2BP31323 418 aa27.15■■□□□ 1.94
CACNA1H-208ENST00000569953 IFNL2Q8IZJ0 200 aa27.15■■□□□ 1.94
CACNA1H-208ENST00000569953 MAPK8IP3Q9UPT6 1336 aa27.15■■□□□ 1.94
CACNA1H-208ENST00000569953 C1orf141Q5JVX7 400 aa27.13■■□□□ 1.93
CACNA1H-208ENST00000569953 FAM196AQ6ZSG2 479 aa27.13■■□□□ 1.93
CACNA1H-208ENST00000569953 ADAMTS8Q9UP79 889 aa27.13■■□□□ 1.93
CACNA1H-208ENST00000569953 MIER1Q8N108 512 aa27.12■■□□□ 1.93
CACNA1H-208ENST00000569953 BCL9O00512 1426 aa27.11■■□□□ 1.93
CACNA1H-208ENST00000569953 DDX54Q8TDD1 881 aaKnown RBP27.11■■□□□ 1.93
CACNA1H-208ENST00000569953 LRRC37A3O60309 1634 aa27.11■■□□□ 1.93
CACNA1H-208ENST00000569953 CCDC184Q52MB2 194 aa27.1■■□□□ 1.93
CACNA1H-208ENST00000569953 RUNDC1Q96C34 613 aa27.1■■□□□ 1.93
CACNA1H-208ENST00000569953 PKD1L3Q7Z443 1732 aa27.1■■□□□ 1.93
CACNA1H-208ENST00000569953 AKAP4Q5JQC9 854 aa27.09■■□□□ 1.93
CACNA1H-208ENST00000569953 ZNF530Q6P9A1 599 aaPredicted RBP27.09■■□□□ 1.93
CACNA1H-208ENST00000569953 NKX1-1Q15270 411 aaPredicted RBP27.08■■□□□ 1.93
CACNA1H-208ENST00000569953 PLEKHF1Q96S99 279 aa27.08■■□□□ 1.93
CACNA1H-208ENST00000569953 MARCH10Q8NA82 808 aaPredicted RBP27.07■■□□□ 1.92
CACNA1H-208ENST00000569953 PHKG2P15735 406 aa27.06■■□□□ 1.92
CACNA1H-208ENST00000569953 BRWD3Q6RI45 1802 aa27.05■■□□□ 1.92
CACNA1H-208ENST00000569953 CYP27B1O15528 508 aa27.05■■□□□ 1.92
CACNA1H-208ENST00000569953 HTATSF1O43719 755 aaKnown RBP27.05■■□□□ 1.92
CACNA1H-208ENST00000569953 MTHFSDQ2M296 383 aaKnown RBP27.05■■□□□ 1.92
CACNA1H-208ENST00000569953 DCAF5Q96JK2 942 aa27.05■■□□□ 1.92
CACNA1H-208ENST00000569953 GNAT3A8MTJ3 354 aa27.03■■□□□ 1.92
CACNA1H-208ENST00000569953 PHACTR3Q96KR7 559 aa27.03■■□□□ 1.92
CACNA1H-208ENST00000569953 LMOD3Q0VAK6 560 aa27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 NFE2L2Q16236 605 aa27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 CCDC125Q86Z20 511 aa27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 FAM9BQ8IZU0 186 aa27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 NGEFQ8N5V2 710 aa27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 RTF1Q92541 710 aaKnown RBP27.02■■□□□ 1.92
CACNA1H-208ENST00000569953 NCBP3Q53F19 620 aaKnown RBP27.01■■□□□ 1.91
CACNA1H-208ENST00000569953 ERVV-2B6SEH9 535 aa26.99■■□□□ 1.91
CACNA1H-208ENST00000569953 MAP3K5Q99683 1374 aa26.98■■□□□ 1.91
CACNA1H-208ENST00000569953 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
CACNA1H-208ENST00000569953 TMPOP42166 694 aaKnown RBP26.96■■□□□ 1.91
CACNA1H-208ENST00000569953 CCDC146Q8IYE0 955 aa26.95■■□□□ 1.9
CACNA1H-208ENST00000569953 BCL11BQ9C0K0 894 aaPredicted RBP26.95■■□□□ 1.9
CACNA1H-208ENST00000569953 RIPK4P57078 832 aa26.94■■□□□ 1.9
CACNA1H-208ENST00000569953 SF3B2Q13435 895 aaKnown RBP26.94■■□□□ 1.9
CACNA1H-208ENST00000569953 HMGB2P26583 209 aaKnown RBP26.93■■□□□ 1.9
CACNA1H-208ENST00000569953 FAM182BQ5T319 152 aa26.92■■□□□ 1.9
CACNA1H-208ENST00000569953 ILDR2Q71H61 639 aa26.92■■□□□ 1.9
CACNA1H-208ENST00000569953 KAT6BQ8WYB5 2073 aa26.92■■□□□ 1.9
CACNA1H-208ENST00000569953 APAF1O14727 1248 aa26.91■■□□□ 1.9
CACNA1H-208ENST00000569953 RNMTO43148 476 aaKnown RBP26.91■■□□□ 1.9
CACNA1H-208ENST00000569953 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
CACNA1H-208ENST00000569953 CABP4P57796 275 aa26.9■■□□□ 1.9
CACNA1H-208ENST00000569953 TEFQ10587 303 aa26.9■■□□□ 1.9
CACNA1H-208ENST00000569953 TMOD3Q9NYL9 352 aa26.9■■□□□ 1.9
CACNA1H-208ENST00000569953 EP400Q96L91 3159 aa26.89■■□□□ 1.9
CACNA1H-208ENST00000569953 CALD1Q05682 793 aaKnown RBP26.89■■□□□ 1.9
CACNA1H-208ENST00000569953 PRIM1P49642 420 aaKnown RBP26.88■■□□□ 1.89
CACNA1H-208ENST00000569953 CCDC27Q2M243 656 aa26.88■■□□□ 1.89
CACNA1H-208ENST00000569953 SYTL4Q96C24 671 aaPredicted RBP26.88■■□□□ 1.89
CACNA1H-208ENST00000569953 ACSBG1Q96GR2 724 aa26.87■■□□□ 1.89
CACNA1H-208ENST00000569953 CEMIPQ8WUJ3 1361 aa26.86■■□□□ 1.89
CACNA1H-208ENST00000569953 TRIM37O94972 964 aa26.86■■□□□ 1.89
CACNA1H-208ENST00000569953 SMARCC1Q92922 1105 aaPredicted RBP26.86■■□□□ 1.89
CACNA1H-208ENST00000569953 SLC52A2Q9HAB3 445 aa26.86■■□□□ 1.89
CACNA1H-208ENST00000569953 NEUROD2Q15784 382 aa26.85■■□□□ 1.89
CACNA1H-208ENST00000569953 IL17REQ8NFR9 667 aa26.85■■□□□ 1.89
CACNA1H-208ENST00000569953 SCN11AQ9UI33 1791 aa26.84■■□□□ 1.89
CACNA1H-208ENST00000569953 KDM6AO15550 1401 aaPredicted RBP26.84■■□□□ 1.89
CACNA1H-208ENST00000569953 SBF2Q86WG5 1849 aa26.84■■□□□ 1.89
CACNA1H-208ENST00000569953 LGR6Q9HBX8 967 aa26.84■■□□□ 1.89
CACNA1H-208ENST00000569953 NHSQ6T4R5 1651 aa26.83■■□□□ 1.89
CACNA1H-208ENST00000569953 ADAMTS7Q9UKP4 1686 aa26.83■■□□□ 1.89
CACNA1H-208ENST00000569953 BABAM1Q9NWV8 329 aa26.83■■□□□ 1.89
CACNA1H-208ENST00000569953 PLSCR1O15162 318 aa26.82■■□□□ 1.88
CACNA1H-208ENST00000569953 BAG6P46379 1132 aa26.82■■□□□ 1.88
CACNA1H-208ENST00000569953 NFATC2IPQ8NCF5 419 aa26.82■■□□□ 1.88
CACNA1H-208ENST00000569953 KCNQ2O43526 872 aa26.81■■□□□ 1.88
CACNA1H-208ENST00000569953 TAF7Q15545 349 aaPredicted RBP26.81■■□□□ 1.88
CACNA1H-208ENST00000569953 DOT1LQ8TEK3 1739 aa26.81■■□□□ 1.88
CACNA1H-208ENST00000569953 APBA3O96018 575 aa26.8■■□□□ 1.88
CACNA1H-208ENST00000569953 MCM10Q7L590 875 aa26.8■■□□□ 1.88
CACNA1H-208ENST00000569953 PIGBQ92521 554 aa26.8■■□□□ 1.88
CACNA1H-208ENST00000569953 UPF1Q92900 1129 aaKnown RBP eCLIP26.8■■□□□ 1.88
CACNA1H-208ENST00000569953 RRP7AQ9Y3A4 280 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms