RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 HSPA2P54652 639 aa15.05■□□□□ 0
SPG7-222ENST00000569820 PDE3AQ14432 1141 aa15.05■□□□□ 0
SPG7-222ENST00000569820 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ -0
SPG7-222ENST00000569820 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
SPG7-222ENST00000569820 KDM4FA0A1W2PPD8 638 aa15.04■□□□□ -0
SPG7-222ENST00000569820 AMPHP49418 695 aa15.04■□□□□ -0
SPG7-222ENST00000569820 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
SPG7-222ENST00000569820 GZF1Q9H116 711 aaPredicted RBP15.04■□□□□ -0
SPG7-222ENST00000569820 DCCP43146 1447 aa15.04■□□□□ -0
SPG7-222ENST00000569820 MCM4P33991 863 aa15.04■□□□□ -0
SPG7-222ENST00000569820 PSME1Q06323 249 aa15.04■□□□□ -0
SPG7-222ENST00000569820 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
SPG7-222ENST00000569820 RTL1A6NKG5 1358 aa15.04■□□□□ -0
SPG7-222ENST00000569820 TMEM94Q12767 1356 aa15.04■□□□□ -0
SPG7-222ENST00000569820 IGSF1Q8N6C5 1336 aa15.03■□□□□ -0
SPG7-222ENST00000569820 SLIT3O75094 1523 aa15.03■□□□□ -0
SPG7-222ENST00000569820 HOXC9P31274 260 aa15.03■□□□□ -0
SPG7-222ENST00000569820 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
SPG7-222ENST00000569820 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
SPG7-222ENST00000569820 MST1RQ04912 1400 aa15.03■□□□□ -0
SPG7-222ENST00000569820 NCOA3Q9Y6Q9 1424 aa15.03■□□□□ -0
SPG7-222ENST00000569820 ALS2Q96Q42 1657 aa15.03■□□□□ -0
SPG7-222ENST00000569820 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
SPG7-222ENST00000569820 MRE11P49959 708 aa15.03■□□□□ -0
SPG7-222ENST00000569820 ZNF853P0CG23 659 aa15.02■□□□□ -0
SPG7-222ENST00000569820 TBC1D32Q96NH3 1257 aa15.02■□□□□ -0
SPG7-222ENST00000569820 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 FOXO3O43524 673 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 EYA1Q99502 592 aa15.01□□□□□ -0.01
SPG7-222ENST00000569820 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
SPG7-222ENST00000569820 TNNQ9UQP3 1299 aa15□□□□□ -0.01
SPG7-222ENST00000569820 GNAI1P63096 354 aa15□□□□□ -0.01
SPG7-222ENST00000569820 ESPNB1AK53 854 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 TRAK2O60296 914 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 RLBP1P12271 317 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 XPCQ01831 940 aaPredicted RBP14.99□□□□□ -0.01
SPG7-222ENST00000569820 SSH1Q8WYL5 1049 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 RGPD2P0DJD1 1756 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 DCTN1Q14203 1278 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 SMC4Q9NTJ3 1288 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
SPG7-222ENST00000569820 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
SPG7-222ENST00000569820 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
SPG7-222ENST00000569820 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
SPG7-222ENST00000569820 GRPEL1Q9HAV7 217 aa14.97□□□□□ -0.01
SPG7-222ENST00000569820 KCNH5Q8NCM2 988 aa14.97□□□□□ -0.01
SPG7-222ENST00000569820 CHMP5Q9NZZ3 219 aa14.97□□□□□ -0.01
SPG7-222ENST00000569820 TPM2P07951 284 aa14.96□□□□□ -0.01
SPG7-222ENST00000569820 ATF3P18847 181 aa14.96□□□□□ -0.01
SPG7-222ENST00000569820 ZKSCAN2Q63HK3 967 aa14.96□□□□□ -0.01
SPG7-222ENST00000569820 IP6K1Q92551 441 aa14.96□□□□□ -0.01
SPG7-222ENST00000569820 ISY1Q9ULR0 285 aaKnown RBP14.96□□□□□ -0.01
SPG7-222ENST00000569820 MED1Q15648 1581 aaPredicted RBP14.96□□□□□ -0.02
SPG7-222ENST00000569820 MTHFSDQ2M296 383 aaKnown RBP14.95□□□□□ -0.02
SPG7-222ENST00000569820 ALDH1L2Q3SY69 923 aa14.95□□□□□ -0.02
SPG7-222ENST00000569820 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
SPG7-222ENST00000569820 CRB1P82279 1406 aa14.95□□□□□ -0.02
SPG7-222ENST00000569820 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
SPG7-222ENST00000569820 CAMTA1Q9Y6Y1 1673 aa14.95□□□□□ -0.02
SPG7-222ENST00000569820 ERBB4Q15303 1308 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 TSPYL6Q8N831 410 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 TRIM44Q96DX7 344 aaPredicted RBP14.94□□□□□ -0.02
SPG7-222ENST00000569820 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 VAMP4O75379 141 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 TRIM27P14373 513 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 MCM10Q7L590 875 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
SPG7-222ENST00000569820 DDX11L8A8MPP1 907 aa14.93□□□□□ -0.02
SPG7-222ENST00000569820 GCP02774 474 aa14.93□□□□□ -0.02
SPG7-222ENST00000569820 LTV1Q96GA3 475 aaPredicted RBP14.93□□□□□ -0.02
SPG7-222ENST00000569820 MSH6P52701 1360 aa14.93□□□□□ -0.02
SPG7-222ENST00000569820 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
SPG7-222ENST00000569820 BRPF1P55201 1214 aaPredicted RBP14.93□□□□□ -0.02
SPG7-222ENST00000569820 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
SPG7-222ENST00000569820 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
SPG7-222ENST00000569820 MVPQ14764 893 aaKnown RBP14.92□□□□□ -0.02
SPG7-222ENST00000569820 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
SPG7-222ENST00000569820 NOB1Q9ULX3 412 aaKnown RBP14.92□□□□□ -0.02
SPG7-222ENST00000569820 PXDNQ92626 1479 aa14.92□□□□□ -0.02
SPG7-222ENST00000569820 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
SPG7-222ENST00000569820 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
SPG7-222ENST00000569820 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
SPG7-222ENST00000569820 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
SPG7-222ENST00000569820 CHL1O00533 1208 aa14.91□□□□□ -0.02
SPG7-222ENST00000569820 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
SPG7-222ENST00000569820 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
SPG7-222ENST00000569820 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
SPG7-222ENST00000569820 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
SPG7-222ENST00000569820 MRPL50Q8N5N7 158 aaKnown RBP14.89□□□□□ -0.03
SPG7-222ENST00000569820 DDX17Q92841 729 aaKnown RBP14.89□□□□□ -0.03
SPG7-222ENST00000569820 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
SPG7-222ENST00000569820 LMO7Q8WWI1 1683 aa14.89□□□□□ -0.03
SPG7-222ENST00000569820 ELL2O00472 640 aaPredicted RBP14.89□□□□□ -0.03
SPG7-222ENST00000569820 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
SPG7-222ENST00000569820 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
SPG7-222ENST00000569820 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms