RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 NPHP4O75161 1426 aaPredicted RBP9.91□□□□□ -0.82
LINC00559-201ENST00000569476 RGS3P49796 1198 aa9.9□□□□□ -0.82
LINC00559-201ENST00000569476 RPAP2Q8IXW5 612 aaPredicted RBP9.9□□□□□ -0.82
LINC00559-201ENST00000569476 MSH6P52701 1360 aa9.9□□□□□ -0.82
LINC00559-201ENST00000569476 KDM3BQ7LBC6 1761 aa9.9□□□□□ -0.82
LINC00559-201ENST00000569476 RGS12O14924 1447 aa9.9□□□□□ -0.82
LINC00559-201ENST00000569476 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.82
LINC00559-201ENST00000569476 HOXB7P09629 217 aa9.9□□□□□ -0.83
LINC00559-201ENST00000569476 KCNH5Q8NCM2 988 aa9.89□□□□□ -0.83
LINC00559-201ENST00000569476 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
LINC00559-201ENST00000569476 HMOX1P09601 288 aa9.88□□□□□ -0.83
LINC00559-201ENST00000569476 NGDNQ8NEJ9 315 aaKnown RBP9.88□□□□□ -0.83
LINC00559-201ENST00000569476 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
LINC00559-201ENST00000569476 CHD1LQ86WJ1 897 aa9.88□□□□□ -0.83
LINC00559-201ENST00000569476 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
LINC00559-201ENST00000569476 CCT4P50991 539 aaKnown RBP9.88□□□□□ -0.83
LINC00559-201ENST00000569476 RRS1Q15050 365 aaKnown RBP9.88□□□□□ -0.83
LINC00559-201ENST00000569476 SULT6B1Q6IMI4 303 aa9.88□□□□□ -0.83
LINC00559-201ENST00000569476 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
LINC00559-201ENST00000569476 RTF1Q92541 710 aaKnown RBP9.87□□□□□ -0.83
LINC00559-201ENST00000569476 SNX21Q969T3 373 aa9.87□□□□□ -0.83
LINC00559-201ENST00000569476 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
LINC00559-201ENST00000569476 BCL2L13Q9BXK5 485 aa9.87□□□□□ -0.83
LINC00559-201ENST00000569476 KCNA6P17658 529 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 TNNQ9UQP3 1299 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 ALS2Q96Q42 1657 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 PTMSP20962 102 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 HOXC9P31274 260 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 ANKRD44Q8N8A2 993 aa9.86□□□□□ -0.83
LINC00559-201ENST00000569476 IP6K1Q92551 441 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 PHF8Q9UPP1 1060 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 ATP10DQ9P241 1426 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 EPB41L2O43491 1005 aaKnown RBP9.85□□□□□ -0.83
LINC00559-201ENST00000569476 HMMRO75330 724 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 AMPHP49418 695 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 SLC26A8Q96RN1 970 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 CEMIPQ8WUJ3 1361 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
LINC00559-201ENST00000569476 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
LINC00559-201ENST00000569476 SIPA1L3O60292 1781 aaPredicted RBP9.84□□□□□ -0.83
LINC00559-201ENST00000569476 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
LINC00559-201ENST00000569476 CEBPAP49715 358 aaPredicted RBP9.84□□□□□ -0.83
LINC00559-201ENST00000569476 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
LINC00559-201ENST00000569476 AOX1Q06278 1338 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 NCKAP5LQ9HCH0 1330 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 CCDC30Q5VVM6 783 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 HSP90AB2PQ58FF8 381 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 EYA1Q99502 592 aa9.83□□□□□ -0.84
LINC00559-201ENST00000569476 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
LINC00559-201ENST00000569476 C22orf23Q9BZE7 217 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 HDAC5Q9UQL6 1122 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
LINC00559-201ENST00000569476 MTHFSDQ2M296 383 aaKnown RBP9.82□□□□□ -0.84
LINC00559-201ENST00000569476 CDC45O75419 566 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 GNAI3P08754 354 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 NLRP6P59044 892 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 OSBPL3Q9H4L5 887 aa9.82□□□□□ -0.84
LINC00559-201ENST00000569476 TUBGCP6Q96RT7 1819 aa9.81□□□□□ -0.84
LINC00559-201ENST00000569476 AEBP1Q8IUX7 1158 aa9.81□□□□□ -0.84
LINC00559-201ENST00000569476 STK31Q9BXU1 1019 aa9.81□□□□□ -0.84
LINC00559-201ENST00000569476 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
LINC00559-201ENST00000569476 TSPYL4Q9UJ04 414 aa9.81□□□□□ -0.84
LINC00559-201ENST00000569476 CRYBG1Q9Y4K1 1723 aa9.8□□□□□ -0.84
LINC00559-201ENST00000569476 DEKP35659 375 aaKnown RBP9.8□□□□□ -0.84
LINC00559-201ENST00000569476 CASC1Q6TDU7 716 aa9.8□□□□□ -0.84
LINC00559-201ENST00000569476 NFKBIBQ15653 356 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 CEP85Q6P2H3 762 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 MRC1P22897 1456 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 THUMPD2Q9BTF0 503 aaKnown RBP9.79□□□□□ -0.84
LINC00559-201ENST00000569476 SRCIN1Q9C0H9 1055 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 PKD1L3Q7Z443 1732 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 SKAP1Q86WV1 359 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 IL17RAQ96F46 866 aa9.79□□□□□ -0.84
LINC00559-201ENST00000569476 C1orf167Q5SNV9 1468 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 FBLN1P23142 703 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 PLEKHO1Q53GL0 409 aaPredicted RBP9.78□□□□□ -0.84
LINC00559-201ENST00000569476 AKAP4Q5JQC9 854 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 HSCBQ8IWL3 235 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 CHMP5Q9NZZ3 219 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 TTC22Q5TAA0 569 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 SIRT2Q8IXJ6 389 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 FAM83GA6ND36 823 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 PSME1Q06323 249 aa9.78□□□□□ -0.84
LINC00559-201ENST00000569476 AEBP2Q6ZN18 517 aaPredicted RBP9.78□□□□□ -0.84
LINC00559-201ENST00000569476 ISY1Q9ULR0 285 aaKnown RBP9.78□□□□□ -0.84
LINC00559-201ENST00000569476 GNAI2P04899 355 aa9.77□□□□□ -0.85
LINC00559-201ENST00000569476 ANKRD45Q5TZF3 282 aa9.77□□□□□ -0.85
LINC00559-201ENST00000569476 COL18A1P39060 1754 aa9.77□□□□□ -0.85
LINC00559-201ENST00000569476 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.85
LINC00559-201ENST00000569476 RAB11FIP3O75154 756 aa9.77□□□□□ -0.85
LINC00559-201ENST00000569476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.77□□□□□ -0.85
LINC00559-201ENST00000569476 SEC24BO95487 1268 aa9.76□□□□□ -0.85
LINC00559-201ENST00000569476 MCM10Q7L590 875 aa9.76□□□□□ -0.85
LINC00559-201ENST00000569476 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
LINC00559-201ENST00000569476 PLEKHM2Q8IWE5 1019 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms