RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 GNAI1P63096 354 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 NME9Q86XW9 330 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
CDH13-213ENST00000569454 SMC4Q9NTJ3 1288 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 IFT57Q9NWB7 429 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 DDX19BQ9UMR2 479 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 NOP58Q9Y2X3 529 aaKnown RBP7.32□□□□□ -1.24
CDH13-213ENST00000569454 ARHGEF10O15013 1369 aa7.32□□□□□ -1.24
CDH13-213ENST00000569454 ACEP12821 1306 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
CDH13-213ENST00000569454 FAM161AQ3B820 660 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
CDH13-213ENST00000569454 FRAT1Q92837 279 aaPredicted RBP7.31□□□□□ -1.24
CDH13-213ENST00000569454 CREBZFQ9NS37 354 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 FMN2Q9NZ56 1722 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 AMOTL2Q9Y2J4 779 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 SBNO1A3KN83 1393 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 FLT4P35916 1363 aa7.31□□□□□ -1.24
CDH13-213ENST00000569454 PPM1GO15355 546 aaPredicted RBP7.3□□□□□ -1.24
CDH13-213ENST00000569454 ATF7IPQ6VMQ6 1270 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 SLC39A7Q92504 469 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 ARHGAP45Q92619 1136 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 RWDD1Q9H446 243 aaPredicted RBP7.3□□□□□ -1.24
CDH13-213ENST00000569454 COG6Q9Y2V7 657 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 EMILIN1Q9Y6C2 1016 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 RTL1A6NKG5 1358 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 RGPD1P0DJD0 1748 aa7.3□□□□□ -1.24
CDH13-213ENST00000569454 CEBPAP49715 358 aaPredicted RBP7.29□□□□□ -1.24
CDH13-213ENST00000569454 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
CDH13-213ENST00000569454 ASTLQ6HA08 431 aaPredicted RBP7.29□□□□□ -1.24
CDH13-213ENST00000569454 PANK1Q8TE04 598 aa7.29□□□□□ -1.24
CDH13-213ENST00000569454 SLC26A8Q96RN1 970 aa7.29□□□□□ -1.24
CDH13-213ENST00000569454 ZBTB47Q9UFB7 747 aaPredicted RBP7.29□□□□□ -1.24
CDH13-213ENST00000569454 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
CDH13-213ENST00000569454 HDAC1Q13547 482 aaPredicted RBP7.28□□□□□ -1.24
CDH13-213ENST00000569454 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
CDH13-213ENST00000569454 ANKLE2Q86XL3 938 aa7.28□□□□□ -1.24
CDH13-213ENST00000569454 TSR2Q969E8 191 aaKnown RBP7.28□□□□□ -1.24
CDH13-213ENST00000569454 CFAP44Q96MT7 982 aa7.28□□□□□ -1.24
CDH13-213ENST00000569454 METRNQ9UJH8 293 aa7.28□□□□□ -1.24
CDH13-213ENST00000569454 KDRP35968 1356 aa7.28□□□□□ -1.24
CDH13-213ENST00000569454 PIK3C2AO00443 1686 aa7.28□□□□□ -1.24
CDH13-213ENST00000569454 ADGRL3Q9HAR2 1447 aa7.27□□□□□ -1.24
CDH13-213ENST00000569454 ZNF853P0CG23 659 aa7.27□□□□□ -1.25
CDH13-213ENST00000569454 TRIM27P14373 513 aa7.27□□□□□ -1.25
CDH13-213ENST00000569454 NGDNQ8NEJ9 315 aaKnown RBP7.27□□□□□ -1.25
CDH13-213ENST00000569454 SSH1Q8WYL5 1049 aa7.27□□□□□ -1.25
CDH13-213ENST00000569454 KIAA0232Q92628 1395 aa7.27□□□□□ -1.25
CDH13-213ENST00000569454 NWD1Q149M9 1564 aa7.27□□□□□ -1.25
CDH13-213ENST00000569454 CHD2O14647 1828 aaKnown RBP7.27□□□□□ -1.25
CDH13-213ENST00000569454 SOS1Q07889 1333 aaPredicted RBP7.27□□□□□ -1.25
CDH13-213ENST00000569454 HMOX1P09601 288 aa7.26□□□□□ -1.25
CDH13-213ENST00000569454 POTEJP0CG39 1038 aa7.26□□□□□ -1.25
CDH13-213ENST00000569454 RLBP1P12271 317 aa7.26□□□□□ -1.25
CDH13-213ENST00000569454 EIF4A2Q14240 407 aaKnown RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 RRS1Q15050 365 aaKnown RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 BCL2L13Q9BXK5 485 aa7.26□□□□□ -1.25
CDH13-213ENST00000569454 API5Q9BZZ5 524 aaKnown RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 UPF2Q9HAU5 1272 aaKnown RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 PEAK1Q9H792 1746 aa7.26□□□□□ -1.25
CDH13-213ENST00000569454 SETD1BQ9UPS6 1966 aaKnown RBP7.26□□□□□ -1.25
CDH13-213ENST00000569454 HTATSF1O43719 755 aaKnown RBP7.25□□□□□ -1.25
CDH13-213ENST00000569454 C8orf34Q49A92 452 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 ITPRIPQ8IWB1 547 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 GAS2L2Q8NHY3 880 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 PHF12Q96QT6 1004 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 PHRF1Q9P1Y6 1649 aaKnown RBP7.25□□□□□ -1.25
CDH13-213ENST00000569454 MAP3K19Q56UN5 1328 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 IGSF1Q8N6C5 1336 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 NCKAP5LQ9HCH0 1330 aa7.25□□□□□ -1.25
CDH13-213ENST00000569454 LRRC37A3O60309 1634 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 ATMINO43313 823 aaPredicted RBP7.24□□□□□ -1.25
CDH13-213ENST00000569454 IGHDP01880 384 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 KCNA6P17658 529 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 RGS3P49796 1198 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 TWISTNBQ3B726 338 aaPredicted RBP7.24□□□□□ -1.25
CDH13-213ENST00000569454 SULT6B1Q6IMI4 303 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 SMC5Q8IY18 1101 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 KLHL34Q8N239 644 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 CHMP4AQ9BY43 222 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 SCUBE2Q9NQ36 999 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 MBIPQ9NS73 344 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 BABAM1Q9NWV8 329 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 NOB1Q9ULX3 412 aaKnown RBP7.24□□□□□ -1.25
CDH13-213ENST00000569454 DLG5Q8TDM6 1919 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 NPHP4O75161 1426 aaPredicted RBP7.24□□□□□ -1.25
CDH13-213ENST00000569454 ABCC4O15439 1325 aa7.24□□□□□ -1.25
CDH13-213ENST00000569454 KIF1AQ12756 1690 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 VAMP4O75379 141 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 AMPHP49418 695 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 RTF1Q92541 710 aaKnown RBP7.23□□□□□ -1.25
CDH13-213ENST00000569454 ZBTB40Q9NUA8 1239 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 PCDHB15Q9Y5E8 787 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 PTPRCP08575 1304 aa7.23□□□□□ -1.25
CDH13-213ENST00000569454 CHL1O00533 1208 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 NLRP6P59044 892 aa7.22□□□□□ -1.25
CDH13-213ENST00000569454 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
CDH13-213ENST00000569454 TMEM57Q8N5G2 664 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms