RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
TCF4-240ENST00000568673 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
TCF4-240ENST00000568673 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
TCF4-240ENST00000568673 EYA1Q99502 592 aa12.11□□□□□ -0.47
TCF4-240ENST00000568673 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
TCF4-240ENST00000568673 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
TCF4-240ENST00000568673 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
TCF4-240ENST00000568673 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
TCF4-240ENST00000568673 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
TCF4-240ENST00000568673 RIMS1Q86UR5 1692 aaKnown RBP12.1□□□□□ -0.47
TCF4-240ENST00000568673 FMN2Q9NZ56 1722 aa12.1□□□□□ -0.47
TCF4-240ENST00000568673 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
TCF4-240ENST00000568673 PTPRCP08575 1304 aa12.09□□□□□ -0.47
TCF4-240ENST00000568673 ZBTB22O15209 634 aa12.09□□□□□ -0.47
TCF4-240ENST00000568673 FOXO3O43524 673 aa12.09□□□□□ -0.47
TCF4-240ENST00000568673 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
TCF4-240ENST00000568673 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.47
TCF4-240ENST00000568673 RGS12O14924 1447 aa12.08□□□□□ -0.48
TCF4-240ENST00000568673 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
TCF4-240ENST00000568673 CEP170BQ9Y4F5 1589 aaPredicted RBP12.08□□□□□ -0.48
TCF4-240ENST00000568673 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 HOXC9P31274 260 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 MIS18AQ9NYP9 233 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
TCF4-240ENST00000568673 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
TCF4-240ENST00000568673 GSE1Q14687 1217 aa12.06□□□□□ -0.48
TCF4-240ENST00000568673 RPAP2Q8IXW5 612 aaPredicted RBP12.06□□□□□ -0.48
TCF4-240ENST00000568673 RBM25P49756 843 aaKnown RBP12.06□□□□□ -0.48
TCF4-240ENST00000568673 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
TCF4-240ENST00000568673 SLKQ9H2G2 1235 aaPredicted RBP12.06□□□□□ -0.48
TCF4-240ENST00000568673 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
TCF4-240ENST00000568673 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
TCF4-240ENST00000568673 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
TCF4-240ENST00000568673 USP54Q70EL1 1684 aa12.04□□□□□ -0.48
TCF4-240ENST00000568673 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
TCF4-240ENST00000568673 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
TCF4-240ENST00000568673 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
TCF4-240ENST00000568673 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
TCF4-240ENST00000568673 RTL1A6NKG5 1358 aa12.03□□□□□ -0.48
TCF4-240ENST00000568673 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
TCF4-240ENST00000568673 MSH6P52701 1360 aa12.03□□□□□ -0.48
TCF4-240ENST00000568673 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
TCF4-240ENST00000568673 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
TCF4-240ENST00000568673 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
TCF4-240ENST00000568673 MEIS3Q99687 375 aa12.02□□□□□ -0.49
TCF4-240ENST00000568673 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
TCF4-240ENST00000568673 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
TCF4-240ENST00000568673 G2E3Q7L622 706 aa12.01□□□□□ -0.49
TCF4-240ENST00000568673 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
TCF4-240ENST00000568673 SNX21Q969T3 373 aa12.01□□□□□ -0.49
TCF4-240ENST00000568673 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
TCF4-240ENST00000568673 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
TCF4-240ENST00000568673 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
TCF4-240ENST00000568673 C14orf37Q86TY3 774 aa12□□□□□ -0.49
TCF4-240ENST00000568673 HSCBQ8IWL3 235 aa12□□□□□ -0.49
TCF4-240ENST00000568673 IP6K1Q92551 441 aa12□□□□□ -0.49
TCF4-240ENST00000568673 MAP3K5Q99683 1374 aa12□□□□□ -0.49
TCF4-240ENST00000568673 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
TCF4-240ENST00000568673 EIF5BO60841 1220 aaKnown RBP12□□□□□ -0.49
TCF4-240ENST00000568673 CDC45O75419 566 aa12□□□□□ -0.49
TCF4-240ENST00000568673 GSPT1P15170 499 aaKnown RBP12□□□□□ -0.49
TCF4-240ENST00000568673 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
TCF4-240ENST00000568673 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
TCF4-240ENST00000568673 ARXQ96QS3 562 aa12□□□□□ -0.49
TCF4-240ENST00000568673 LRRC37A3O60309 1634 aa12□□□□□ -0.49
TCF4-240ENST00000568673 SLC4A10Q6U841 1118 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 F6X3S4 739 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 HMMRO75330 724 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 PSME1Q06323 249 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 TTC22Q5TAA0 569 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
TCF4-240ENST00000568673 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
TCF4-240ENST00000568673 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
TCF4-240ENST00000568673 FLIIQ13045 1269 aa11.98□□□□□ -0.49
TCF4-240ENST00000568673 ESCO1Q5FWF5 840 aa11.98□□□□□ -0.49
TCF4-240ENST00000568673 KIF2CQ99661 725 aa11.98□□□□□ -0.49
TCF4-240ENST00000568673 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
TCF4-240ENST00000568673 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
TCF4-240ENST00000568673 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
TCF4-240ENST00000568673 ADGRL3Q9HAR2 1447 aa11.97□□□□□ -0.49
TCF4-240ENST00000568673 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
TCF4-240ENST00000568673 GNAI2P04899 355 aa11.97□□□□□ -0.49
TCF4-240ENST00000568673 FKBP5Q13451 457 aaPredicted RBP11.96□□□□□ -0.49
TCF4-240ENST00000568673 NBPF6Q5VWK0 638 aa11.96□□□□□ -0.49
TCF4-240ENST00000568673 USHBP1Q8N6Y0 703 aa11.96□□□□□ -0.49
TCF4-240ENST00000568673 NBPF4Q96M43 638 aa11.96□□□□□ -0.49
TCF4-240ENST00000568673 LTN1O94822 1766 aa11.96□□□□□ -0.5
TCF4-240ENST00000568673 NFAT5O94916 1531 aa11.96□□□□□ -0.5
TCF4-240ENST00000568673 CACNA1FO60840 1977 aa11.96□□□□□ -0.5
TCF4-240ENST00000568673 GNAI3P08754 354 aa11.96□□□□□ -0.5
TCF4-240ENST00000568673 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.5
TCF4-240ENST00000568673 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.5
TCF4-240ENST00000568673 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
TCF4-240ENST00000568673 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
TCF4-240ENST00000568673 APBB1O00213 710 aa11.94□□□□□ -0.5
TCF4-240ENST00000568673 DDIT3P35638 169 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms