RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 CASC1Q6TDU7 716 aa26.52■■□□□ 1.84
DENND4A-208ENST00000568515 TPM2P07951 284 aa26.52■■□□□ 1.84
DENND4A-208ENST00000568515 ZSCAN23Q3MJ62 389 aa26.52■■□□□ 1.84
DENND4A-208ENST00000568515 ST18O60284 1047 aa26.51■■□□□ 1.83
DENND4A-208ENST00000568515 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.83
DENND4A-208ENST00000568515 COG3Q96JB2 828 aa26.51■■□□□ 1.83
DENND4A-208ENST00000568515 RGS12O14924 1447 aa26.5■■□□□ 1.83
DENND4A-208ENST00000568515 SMARCA5O60264 1052 aaPredicted RBP26.5■■□□□ 1.83
DENND4A-208ENST00000568515 HAP1P54257 671 aaPredicted RBP26.49■■□□□ 1.83
DENND4A-208ENST00000568515 WASLO00401 505 aaPredicted RBP26.48■■□□□ 1.83
DENND4A-208ENST00000568515 ZGPATQ8N5A5 531 aaKnown RBP26.48■■□□□ 1.83
DENND4A-208ENST00000568515 KRT24Q2M2I5 525 aa26.47■■□□□ 1.83
DENND4A-208ENST00000568515 RTL1A6NKG5 1358 aa26.47■■□□□ 1.83
DENND4A-208ENST00000568515 APBB1O00213 710 aa26.47■■□□□ 1.83
DENND4A-208ENST00000568515 REC8O95072 547 aa26.47■■□□□ 1.83
DENND4A-208ENST00000568515 MSNP26038 577 aaKnown RBP26.46■■□□□ 1.83
DENND4A-208ENST00000568515 PRPF40AO75400 957 aaKnown RBP26.45■■□□□ 1.83
DENND4A-208ENST00000568515 RBSNQ9H1K0 784 aa26.45■■□□□ 1.83
DENND4A-208ENST00000568515 MSH6P52701 1360 aa26.45■■□□□ 1.83
DENND4A-208ENST00000568515 KIAA1211Q6ZU35 1233 aa26.45■■□□□ 1.82
DENND4A-208ENST00000568515 ZDHHC9Q9Y397 364 aa26.45■■□□□ 1.82
DENND4A-208ENST00000568515 CHL1O00533 1208 aa26.44■■□□□ 1.82
DENND4A-208ENST00000568515 OFD1O75665 1012 aa26.44■■□□□ 1.82
DENND4A-208ENST00000568515 MEIS3Q99687 375 aa26.44■■□□□ 1.82
DENND4A-208ENST00000568515 PTPRCP08575 1304 aa26.44■■□□□ 1.82
DENND4A-208ENST00000568515 HS1BP3Q53T59 392 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 CPS1P31327 1500 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 ERC2O15083 957 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 GPT2Q8TD30 523 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
DENND4A-208ENST00000568515 PRIM1P49642 420 aaKnown RBP26.42■■□□□ 1.82
DENND4A-208ENST00000568515 NUDT16Q96DE0 195 aaKnown RBP26.42■■□□□ 1.82
DENND4A-208ENST00000568515 KIAA0232Q92628 1395 aa26.42■■□□□ 1.82
DENND4A-208ENST00000568515 AEBP1Q8IUX7 1158 aa26.42■■□□□ 1.82
DENND4A-208ENST00000568515 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
DENND4A-208ENST00000568515 SULT6B1Q6IMI4 303 aa26.4■■□□□ 1.82
DENND4A-208ENST00000568515 PDLIM2Q96JY6 352 aa26.4■■□□□ 1.82
DENND4A-208ENST00000568515 NCKAP5LQ9HCH0 1330 aa26.4■■□□□ 1.82
DENND4A-208ENST00000568515 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
DENND4A-208ENST00000568515 A2ML1A8K2U0 1454 aa26.39■■□□□ 1.82
DENND4A-208ENST00000568515 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.39■■□□□ 1.81
DENND4A-208ENST00000568515 MCM10Q7L590 875 aa26.39■■□□□ 1.81
DENND4A-208ENST00000568515 CCDC61Q9Y6R9 512 aa26.39■■□□□ 1.81
DENND4A-208ENST00000568515 HMMRO75330 724 aa26.38■■□□□ 1.81
DENND4A-208ENST00000568515 EIF4A2Q14240 407 aaKnown RBP26.38■■□□□ 1.81
DENND4A-208ENST00000568515 OSBPL3Q9H4L5 887 aa26.38■■□□□ 1.81
DENND4A-208ENST00000568515 MON2Q7Z3U7 1717 aa26.37■■□□□ 1.81
DENND4A-208ENST00000568515 NOL7Q9UMY1 257 aaKnown RBP26.37■■□□□ 1.81
DENND4A-208ENST00000568515 SLC4A2P04920 1241 aa26.35■■□□□ 1.81
DENND4A-208ENST00000568515 PDE1AP54750 535 aa26.35■■□□□ 1.81
DENND4A-208ENST00000568515 TMEM63CQ9P1W3 806 aa26.35■■□□□ 1.81
DENND4A-208ENST00000568515 LRSAM1Q6UWE0 723 aa26.34■■□□□ 1.81
DENND4A-208ENST00000568515 TXNDC2Q86VQ3 553 aa26.34■■□□□ 1.81
DENND4A-208ENST00000568515 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
DENND4A-208ENST00000568515 CHAMP1Q96JM3 812 aa26.34■■□□□ 1.81
DENND4A-208ENST00000568515 NRKQ7Z2Y5 1582 aa26.34■■□□□ 1.81
DENND4A-208ENST00000568515 NEK4P51957 841 aa26.33■■□□□ 1.81
DENND4A-208ENST00000568515 TERF1P54274 439 aa26.33■■□□□ 1.81
DENND4A-208ENST00000568515 VSIG10Q8N0Z9 540 aa26.33■■□□□ 1.81
DENND4A-208ENST00000568515 C3P01024 1663 aa26.33■■□□□ 1.8
DENND4A-208ENST00000568515 TMX3Q96JJ7 454 aa26.32■■□□□ 1.8
DENND4A-208ENST00000568515 ZNF500O60304 480 aaPredicted RBP26.32■■□□□ 1.8
DENND4A-208ENST00000568515 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.32■■□□□ 1.8
DENND4A-208ENST00000568515 NSFL1CQ9UNZ2 370 aaKnown RBP26.32■■□□□ 1.8
DENND4A-208ENST00000568515 METP08581 1390 aa26.31■■□□□ 1.8
DENND4A-208ENST00000568515 SYCE3A1L190 88 aa26.31■■□□□ 1.8
DENND4A-208ENST00000568515 AKAP12Q02952 1782 aa26.3■■□□□ 1.8
DENND4A-208ENST00000568515 MCM2P49736 904 aa26.3■■□□□ 1.8
DENND4A-208ENST00000568515 FOXD4L5Q5VV16 416 aaPredicted RBP26.3■■□□□ 1.8
DENND4A-208ENST00000568515 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.3■■□□□ 1.8
DENND4A-208ENST00000568515 FOXD4L4Q8WXT5 416 aaPredicted RBP26.3■■□□□ 1.8
DENND4A-208ENST00000568515 PDCL3Q9H2J4 239 aa26.3■■□□□ 1.8
DENND4A-208ENST00000568515 SLC4A10Q6U841 1118 aa26.3■■□□□ 1.8
DENND4A-208ENST00000568515 MBD3O95983 291 aa26.29■■□□□ 1.8
DENND4A-208ENST00000568515 CRB1P82279 1406 aa26.29■■□□□ 1.8
DENND4A-208ENST00000568515 CCT4P50991 539 aaKnown RBP26.29■■□□□ 1.8
DENND4A-208ENST00000568515 G2E3Q7L622 706 aa26.28■■□□□ 1.8
DENND4A-208ENST00000568515 ESYT1Q9BSJ8 1104 aa26.28■■□□□ 1.8
DENND4A-208ENST00000568515 F6X3S4 739 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 BRD1O95696 1058 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 ITSN1Q15811 1721 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 CUL4AQ13619 759 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 MIS18AQ9NYP9 233 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 ZKSCAN5Q9Y2L8 839 aa26.27■■□□□ 1.8
DENND4A-208ENST00000568515 NRXN3Q9Y4C0 1643 aa26.26■■□□□ 1.8
DENND4A-208ENST00000568515 EXOC6BQ9Y2D4 811 aa26.26■■□□□ 1.79
DENND4A-208ENST00000568515 R3HCC1Q9Y3T6 440 aaKnown RBP26.26■■□□□ 1.79
DENND4A-208ENST00000568515 SIRT1Q96EB6 747 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 SALL3Q9BXA9 1300 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 PRR36Q9H6K5 1346 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 GNAI2P04899 355 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 MCCP23508 829 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 TSHZ3Q63HK5 1081 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 PPP6R1Q9UPN7 881 aa26.25■■□□□ 1.79
DENND4A-208ENST00000568515 XPCQ01831 940 aaPredicted RBP26.24■■□□□ 1.79
DENND4A-208ENST00000568515 MCM5P33992 734 aa26.24■■□□□ 1.79
DENND4A-208ENST00000568515 HSP90AB2PQ58FF8 381 aa26.24■■□□□ 1.79
DENND4A-208ENST00000568515 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms