RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ZNF853P0CG23 659 aa21.07■□□□□ 0.96
CMTM3-213ENST00000566756 LMOD3Q0VAK6 560 aa21.07■□□□□ 0.96
CMTM3-213ENST00000566756 HMOX1P09601 288 aa21.06■□□□□ 0.96
CMTM3-213ENST00000566756 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
CMTM3-213ENST00000566756 IL27Q8NEV9 243 aa21.06■□□□□ 0.96
CMTM3-213ENST00000566756 DLG5Q8TDM6 1919 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 VAMP4O75379 141 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 CADPS2Q86UW7 1296 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 LTN1O94822 1766 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 PHRF1Q9P1Y6 1649 aaKnown RBP21.05■□□□□ 0.96
CMTM3-213ENST00000566756 FOXO3O43524 673 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 MRPL50Q8N5N7 158 aaKnown RBP21.05■□□□□ 0.96
CMTM3-213ENST00000566756 GCC1Q96CN9 775 aa21.05■□□□□ 0.96
CMTM3-213ENST00000566756 RTL1A6NKG5 1358 aa21.04■□□□□ 0.96
CMTM3-213ENST00000566756 NFAT5O94916 1531 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 AMPHP49418 695 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 PHACTR3Q96KR7 559 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
CMTM3-213ENST00000566756 ARHGEF10O15013 1369 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 MSH6P52701 1360 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 ZBTB7BO15156 539 aaPredicted RBP21.03■□□□□ 0.96
CMTM3-213ENST00000566756 SOX12O15370 315 aa21.03■□□□□ 0.96
CMTM3-213ENST00000566756 RBM25P49756 843 aaKnown RBP21.02■□□□□ 0.96
CMTM3-213ENST00000566756 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
CMTM3-213ENST00000566756 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
CMTM3-213ENST00000566756 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.96
CMTM3-213ENST00000566756 SLIT3O75094 1523 aa21.02■□□□□ 0.96
CMTM3-213ENST00000566756 ABCC4O15439 1325 aa21.02■□□□□ 0.95
CMTM3-213ENST00000566756 BMP2KLQ5H9B9 411 aa21.01■□□□□ 0.95
CMTM3-213ENST00000566756 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
CMTM3-213ENST00000566756 HOXC9P31274 260 aa21■□□□□ 0.95
CMTM3-213ENST00000566756 MFAP1P55081 439 aaKnown RBP21■□□□□ 0.95
CMTM3-213ENST00000566756 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
CMTM3-213ENST00000566756 CFAP44Q96MT7 982 aa21■□□□□ 0.95
CMTM3-213ENST00000566756 KDRP35968 1356 aa21■□□□□ 0.95
CMTM3-213ENST00000566756 SULT6B1Q6IMI4 303 aa20.99■□□□□ 0.95
CMTM3-213ENST00000566756 CHMP5Q9NZZ3 219 aa20.99■□□□□ 0.95
CMTM3-213ENST00000566756 SNX21Q969T3 373 aa20.99■□□□□ 0.95
CMTM3-213ENST00000566756 IGSF1Q8N6C5 1336 aa20.98■□□□□ 0.95
CMTM3-213ENST00000566756 API5Q9BZZ5 524 aaKnown RBP20.97■□□□□ 0.95
CMTM3-213ENST00000566756 MBIPQ9NS73 344 aa20.97■□□□□ 0.95
CMTM3-213ENST00000566756 EIF5BO60841 1220 aaKnown RBP20.97■□□□□ 0.95
CMTM3-213ENST00000566756 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-213ENST00000566756 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
CMTM3-213ENST00000566756 BRPF3Q9ULD4 1205 aa20.96■□□□□ 0.95
CMTM3-213ENST00000566756 HSCBQ8IWL3 235 aa20.96■□□□□ 0.95
CMTM3-213ENST00000566756 IP6K1Q92551 441 aa20.96■□□□□ 0.95
CMTM3-213ENST00000566756 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
CMTM3-213ENST00000566756 L1TD1Q5T7N2 865 aaKnown RBP20.94■□□□□ 0.94
CMTM3-213ENST00000566756 EYA1Q99502 592 aa20.94■□□□□ 0.94
CMTM3-213ENST00000566756 LNPKQ9C0E8 428 aa20.94■□□□□ 0.94
CMTM3-213ENST00000566756 NPHP3Q7Z494 1330 aa20.94■□□□□ 0.94
CMTM3-213ENST00000566756 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-213ENST00000566756 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-213ENST00000566756 TSPYL6Q8N831 410 aa20.94■□□□□ 0.94
CMTM3-213ENST00000566756 GCP02774 474 aa20.92■□□□□ 0.94
CMTM3-213ENST00000566756 MCM4P33991 863 aa20.92■□□□□ 0.94
CMTM3-213ENST00000566756 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
CMTM3-213ENST00000566756 ARHGEF25Q86VW2 580 aa20.91■□□□□ 0.94
CMTM3-213ENST00000566756 PXDNQ92626 1479 aa20.9■□□□□ 0.94
CMTM3-213ENST00000566756 DDIT3P35638 169 aa20.9■□□□□ 0.94
CMTM3-213ENST00000566756 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
CMTM3-213ENST00000566756 CIZ1Q9ULV3 898 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-213ENST00000566756 KIAA0232Q92628 1395 aa20.89■□□□□ 0.93
CMTM3-213ENST00000566756 MED1Q15648 1581 aaPredicted RBP20.88■□□□□ 0.93
CMTM3-213ENST00000566756 SIRT2Q8IXJ6 389 aa20.88■□□□□ 0.93
CMTM3-213ENST00000566756 C8orf58Q8NAV2 365 aa20.88■□□□□ 0.93
CMTM3-213ENST00000566756 INTS3Q68E01 1043 aaKnown RBP20.87■□□□□ 0.93
CMTM3-213ENST00000566756 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
CMTM3-213ENST00000566756 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
CMTM3-213ENST00000566756 DDX11L8A8MPP1 907 aa20.86■□□□□ 0.93
CMTM3-213ENST00000566756 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
CMTM3-213ENST00000566756 BRINP3Q76B58 766 aa20.85■□□□□ 0.93
CMTM3-213ENST00000566756 GAS2L2Q8NHY3 880 aa20.85■□□□□ 0.93
CMTM3-213ENST00000566756 FAM43AQ8N2R8 423 aa20.85■□□□□ 0.93
CMTM3-213ENST00000566756 DCTPP1Q9H773 170 aa20.84■□□□□ 0.93
CMTM3-213ENST00000566756 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
CMTM3-213ENST00000566756 SPATA31A3Q5VYP0 1347 aa20.84■□□□□ 0.93
CMTM3-213ENST00000566756 RGPD2P0DJD1 1756 aa20.83■□□□□ 0.93
CMTM3-213ENST00000566756 CHL1O00533 1208 aa20.83■□□□□ 0.93
CMTM3-213ENST00000566756 NCAPD2Q15021 1401 aa20.83■□□□□ 0.92
CMTM3-213ENST00000566756 FSD2A1L4K1 749 aa20.83■□□□□ 0.92
CMTM3-213ENST00000566756 FAM83GA6ND36 823 aa20.83■□□□□ 0.92
CMTM3-213ENST00000566756 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.92
CMTM3-213ENST00000566756 MTHFSDQ2M296 383 aaKnown RBP20.83■□□□□ 0.92
CMTM3-213ENST00000566756 DDX17Q92841 729 aaKnown RBP20.83■□□□□ 0.92
CMTM3-213ENST00000566756 CAMTA1Q9Y6Y1 1673 aa20.83■□□□□ 0.92
CMTM3-213ENST00000566756 PTPRCP08575 1304 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 ELL2O00472 640 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-213ENST00000566756 CDC45O75419 566 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 TBC1D9Q6ZT07 1266 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 KIF2CQ99661 725 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 ABCC6O95255 1503 aa20.82■□□□□ 0.92
CMTM3-213ENST00000566756 PTMSP20962 102 aa20.81■□□□□ 0.92
CMTM3-213ENST00000566756 RPAP2Q8IXW5 612 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-213ENST00000566756 LTV1Q96GA3 475 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-213ENST00000566756 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
CMTM3-213ENST00000566756 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
CMTM3-213ENST00000566756 RGPD5Q99666 1765 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms