RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 MCM10Q7L590 875 aa23.3■■□□□ 1.32
CDH5-205ENST00000565334 C22orf23Q9BZE7 217 aa23.3■■□□□ 1.32
CDH5-205ENST00000565334 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
CDH5-205ENST00000565334 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CDH5-205ENST00000565334 RGPD8O14715 1765 aaPredicted RBP23.28■■□□□ 1.32
CDH5-205ENST00000565334 NLRP6P59044 892 aa23.27■■□□□ 1.32
CDH5-205ENST00000565334 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
CDH5-205ENST00000565334 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
CDH5-205ENST00000565334 RGS12O14924 1447 aa23.27■■□□□ 1.32
CDH5-205ENST00000565334 SOX12O15370 315 aa23.27■■□□□ 1.32
CDH5-205ENST00000565334 EIF5BO60841 1220 aaKnown RBP23.27■■□□□ 1.32
CDH5-205ENST00000565334 RTL1A6NKG5 1358 aa23.27■■□□□ 1.32
CDH5-205ENST00000565334 EYA1Q99502 592 aa23.26■■□□□ 1.31
CDH5-205ENST00000565334 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
CDH5-205ENST00000565334 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
CDH5-205ENST00000565334 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
CDH5-205ENST00000565334 C1orf115Q9H7X2 142 aa23.25■■□□□ 1.31
CDH5-205ENST00000565334 SOS1Q07889 1333 aaPredicted RBP23.24■■□□□ 1.31
CDH5-205ENST00000565334 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
CDH5-205ENST00000565334 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
CDH5-205ENST00000565334 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
CDH5-205ENST00000565334 LRRC37A3O60309 1634 aa23.23■■□□□ 1.31
CDH5-205ENST00000565334 HOXC9P31274 260 aa23.23■■□□□ 1.31
CDH5-205ENST00000565334 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
CDH5-205ENST00000565334 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
CDH5-205ENST00000565334 TSPYL4Q9UJ04 414 aa23.23■■□□□ 1.31
CDH5-205ENST00000565334 RBM25P49756 843 aaKnown RBP23.22■■□□□ 1.31
CDH5-205ENST00000565334 DCTPP1Q9H773 170 aa23.22■■□□□ 1.31
CDH5-205ENST00000565334 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
CDH5-205ENST00000565334 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
CDH5-205ENST00000565334 KRT24Q2M2I5 525 aa23.2■■□□□ 1.3
CDH5-205ENST00000565334 ABTB2Q8N961 1025 aa23.2■■□□□ 1.3
CDH5-205ENST00000565334 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
CDH5-205ENST00000565334 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
CDH5-205ENST00000565334 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
CDH5-205ENST00000565334 ANTXR1Q9H6X2 564 aa23.19■■□□□ 1.3
CDH5-205ENST00000565334 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
CDH5-205ENST00000565334 FOXO3O43524 673 aa23.18■■□□□ 1.3
CDH5-205ENST00000565334 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
CDH5-205ENST00000565334 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
CDH5-205ENST00000565334 GSE1Q14687 1217 aa23.17■■□□□ 1.3
CDH5-205ENST00000565334 CCT4P50991 539 aaKnown RBP23.17■■□□□ 1.3
CDH5-205ENST00000565334 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
CDH5-205ENST00000565334 MSH6P52701 1360 aa23.16■■□□□ 1.3
CDH5-205ENST00000565334 MAP3K5Q99683 1374 aa23.16■■□□□ 1.3
CDH5-205ENST00000565334 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
CDH5-205ENST00000565334 CEP85Q6P2H3 762 aa23.15■■□□□ 1.3
CDH5-205ENST00000565334 STK31Q9BXU1 1019 aa23.14■■□□□ 1.3
CDH5-205ENST00000565334 HSCBQ8IWL3 235 aa23.14■■□□□ 1.29
CDH5-205ENST00000565334 SNX21Q969T3 373 aa23.14■■□□□ 1.29
CDH5-205ENST00000565334 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
CDH5-205ENST00000565334 HMMRO75330 724 aa23.12■■□□□ 1.29
CDH5-205ENST00000565334 CDC45O75419 566 aa23.12■■□□□ 1.29
CDH5-205ENST00000565334 CCDC30Q5VVM6 783 aa23.12■■□□□ 1.29
CDH5-205ENST00000565334 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
CDH5-205ENST00000565334 RTN4Q9NQC3 1192 aaKnown RBP23.12■■□□□ 1.29
CDH5-205ENST00000565334 IP6K1Q92551 441 aa23.11■■□□□ 1.29
CDH5-205ENST00000565334 PLEKHM2Q8IWE5 1019 aa23.11■■□□□ 1.29
CDH5-205ENST00000565334 MIS18AQ9NYP9 233 aa23.11■■□□□ 1.29
CDH5-205ENST00000565334 NFAT5O94916 1531 aa23.11■■□□□ 1.29
CDH5-205ENST00000565334 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
CDH5-205ENST00000565334 NUTM2GQ5VZR2 741 aa23.09■■□□□ 1.29
CDH5-205ENST00000565334 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
CDH5-205ENST00000565334 PHRF1Q9P1Y6 1649 aaKnown RBP23.09■■□□□ 1.29
CDH5-205ENST00000565334 TAF7Q15545 349 aaPredicted RBP23.09■■□□□ 1.29
CDH5-205ENST00000565334 MEIS3Q99687 375 aa23.09■■□□□ 1.29
CDH5-205ENST00000565334 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.28
CDH5-205ENST00000565334 CHMP5Q9NZZ3 219 aa23.08■■□□□ 1.28
CDH5-205ENST00000565334 TTC22Q5TAA0 569 aa23.07■■□□□ 1.28
CDH5-205ENST00000565334 CHMP4AQ9BY43 222 aa23.07■■□□□ 1.28
CDH5-205ENST00000565334 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.07■■□□□ 1.28
CDH5-205ENST00000565334 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
CDH5-205ENST00000565334 C14orf37Q86TY3 774 aa23.06■■□□□ 1.28
CDH5-205ENST00000565334 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
CDH5-205ENST00000565334 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
CDH5-205ENST00000565334 LTN1O94822 1766 aa23.06■■□□□ 1.28
CDH5-205ENST00000565334 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
CDH5-205ENST00000565334 PSME1Q06323 249 aa23.05■■□□□ 1.28
CDH5-205ENST00000565334 G2E3Q7L622 706 aa23.05■■□□□ 1.28
CDH5-205ENST00000565334 GNAI3P08754 354 aa23.05■■□□□ 1.28
CDH5-205ENST00000565334 GSPT1P15170 499 aaKnown RBP23.05■■□□□ 1.28
CDH5-205ENST00000565334 FLIIQ13045 1269 aa23.04■■□□□ 1.28
CDH5-205ENST00000565334 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
CDH5-205ENST00000565334 GNAI2P04899 355 aa23.03■■□□□ 1.28
CDH5-205ENST00000565334 LTV1Q96GA3 475 aaPredicted RBP23.03■■□□□ 1.28
CDH5-205ENST00000565334 MED1Q15648 1581 aaPredicted RBP23.03■■□□□ 1.28
CDH5-205ENST00000565334 ESCO1Q5FWF5 840 aa23.02■■□□□ 1.28
CDH5-205ENST00000565334 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
CDH5-205ENST00000565334 HOXB7P09629 217 aa23.01■■□□□ 1.27
CDH5-205ENST00000565334 CASC1Q6TDU7 716 aa23.01■■□□□ 1.27
CDH5-205ENST00000565334 SLIT3O75094 1523 aa23.01■■□□□ 1.27
CDH5-205ENST00000565334 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
CDH5-205ENST00000565334 F6X3S4 739 aa23■■□□□ 1.27
CDH5-205ENST00000565334 FKBP5Q13451 457 aaPredicted RBP23■■□□□ 1.27
CDH5-205ENST00000565334 CIZ1Q9ULV3 898 aaPredicted RBP23■■□□□ 1.27
CDH5-205ENST00000565334 FAM43AQ8N2R8 423 aa22.99■■□□□ 1.27
CDH5-205ENST00000565334 KIF2CQ99661 725 aa22.99■■□□□ 1.27
CDH5-205ENST00000565334 OSBPL3Q9H4L5 887 aa22.99■■□□□ 1.27
CDH5-205ENST00000565334 SETD1BQ9UPS6 1966 aaKnown RBP22.99■■□□□ 1.27
CDH5-205ENST00000565334 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms