RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SMARCA5O60264 1052 aaPredicted RBP19.18■□□□□ 0.66
GTF3C1-205ENST00000564747 ATP10DQ9P241 1426 aa19.18■□□□□ 0.66
GTF3C1-205ENST00000564747 DIP2BQ9P265 1576 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 SOX12O15370 315 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 ROBO2Q9HCK4 1378 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 ACEP12821 1306 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 TECPR2O15040 1411 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 SSFA2P28290 1259 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 AKAP12Q02952 1782 aa19.17■□□□□ 0.66
GTF3C1-205ENST00000564747 RPAP2Q8IXW5 612 aaPredicted RBP19.16■□□□□ 0.66
GTF3C1-205ENST00000564747 MEIS3Q99687 375 aa19.16■□□□□ 0.66
GTF3C1-205ENST00000564747 HDGFP51858 240 aaKnown RBP19.16■□□□□ 0.66
GTF3C1-205ENST00000564747 MSH6P52701 1360 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 GAS2L3Q86XJ1 694 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 ITSN1Q15811 1721 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 USP26Q9BXU7 913 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 RTL1A6NKG5 1358 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
GTF3C1-205ENST00000564747 SDSP20132 328 aa19.14■□□□□ 0.65
GTF3C1-205ENST00000564747 KIAA0232Q92628 1395 aa19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 FOXO3O43524 673 aa19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 NRKQ7Z2Y5 1582 aa19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 RABEP1Q15276 862 aa19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 PTPRCP08575 1304 aa19.13■□□□□ 0.65
GTF3C1-205ENST00000564747 ISY1Q9ULR0 285 aaKnown RBP19.11■□□□□ 0.65
GTF3C1-205ENST00000564747 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
GTF3C1-205ENST00000564747 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
GTF3C1-205ENST00000564747 G2E3Q7L622 706 aa19.11■□□□□ 0.65
GTF3C1-205ENST00000564747 CRB1P82279 1406 aa19.1■□□□□ 0.65
GTF3C1-205ENST00000564747 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
GTF3C1-205ENST00000564747 F6X3S4 739 aa19.1■□□□□ 0.65
GTF3C1-205ENST00000564747 SLC4A10Q6U841 1118 aa19.1■□□□□ 0.65
GTF3C1-205ENST00000564747 TMEM2Q9UHN6 1383 aa19.1■□□□□ 0.65
GTF3C1-205ENST00000564747 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 MTHFSDQ2M296 383 aaKnown RBP19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 AK9Q5TCS8 1911 aa19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 PTMSP20962 102 aa19.09■□□□□ 0.65
GTF3C1-205ENST00000564747 USP6P35125 1406 aa19.08■□□□□ 0.65
GTF3C1-205ENST00000564747 TNRQ92752 1358 aa19.08■□□□□ 0.65
GTF3C1-205ENST00000564747 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.08■□□□□ 0.64
GTF3C1-205ENST00000564747 CLEC17AQ6ZS10 378 aa19.08■□□□□ 0.64
GTF3C1-205ENST00000564747 ADAMTS13Q76LX8 1427 aa19.07■□□□□ 0.64
GTF3C1-205ENST00000564747 TSPYL4Q9UJ04 414 aa19.07■□□□□ 0.64
GTF3C1-205ENST00000564747 GOLGA6L22H0YM25 854 aa19.07■□□□□ 0.64
GTF3C1-205ENST00000564747 CLCN1P35523 988 aa19.07■□□□□ 0.64
GTF3C1-205ENST00000564747 LTKP29376 864 aa19.06■□□□□ 0.64
GTF3C1-205ENST00000564747 CASC1Q6TDU7 716 aa19.06■□□□□ 0.64
GTF3C1-205ENST00000564747 PKP1Q13835 747 aa19.06■□□□□ 0.64
GTF3C1-205ENST00000564747 RTF1Q92541 710 aaKnown RBP19.06■□□□□ 0.64
GTF3C1-205ENST00000564747 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
GTF3C1-205ENST00000564747 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
GTF3C1-205ENST00000564747 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
GTF3C1-205ENST00000564747 NAP1L5Q96NT1 182 aaPredicted RBP19.04■□□□□ 0.64
GTF3C1-205ENST00000564747 HMMRO75330 724 aa19.04■□□□□ 0.64
GTF3C1-205ENST00000564747 RGPD1P0DJD0 1748 aa19.04■□□□□ 0.64
GTF3C1-205ENST00000564747 PDE1AP54750 535 aa19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 NUCB2P80303 420 aa19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 KLHL40Q2TBA0 621 aa19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
GTF3C1-205ENST00000564747 ARHGEF10O15013 1369 aa19.02■□□□□ 0.64
GTF3C1-205ENST00000564747 REC8O95072 547 aa19.02■□□□□ 0.64
GTF3C1-205ENST00000564747 CYP2E1P05181 493 aaPredicted RBP19.02■□□□□ 0.64
GTF3C1-205ENST00000564747 CCT4P50991 539 aaKnown RBP19.02■□□□□ 0.64
GTF3C1-205ENST00000564747 TSHZ3Q63HK5 1081 aa19.02■□□□□ 0.64
GTF3C1-205ENST00000564747 ERC2O15083 957 aa19.02■□□□□ 0.63
GTF3C1-205ENST00000564747 ST18O60284 1047 aa19.02■□□□□ 0.63
GTF3C1-205ENST00000564747 EYA1Q99502 592 aa19.02■□□□□ 0.63
GTF3C1-205ENST00000564747 ERBB4Q15303 1308 aa19.02■□□□□ 0.63
GTF3C1-205ENST00000564747 SSH2Q76I76 1423 aa19.01■□□□□ 0.63
GTF3C1-205ENST00000564747 RIMS1Q86UR5 1692 aaKnown RBP19.01■□□□□ 0.63
GTF3C1-205ENST00000564747 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
GTF3C1-205ENST00000564747 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
GTF3C1-205ENST00000564747 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
GTF3C1-205ENST00000564747 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
GTF3C1-205ENST00000564747 ESPNB1AK53 854 aa19■□□□□ 0.63
GTF3C1-205ENST00000564747 GNAI2P04899 355 aa19■□□□□ 0.63
GTF3C1-205ENST00000564747 NECTIN2Q92692 538 aa19■□□□□ 0.63
GTF3C1-205ENST00000564747 AMPHP49418 695 aa18.99■□□□□ 0.63
GTF3C1-205ENST00000564747 PTPRUQ92729 1446 aa18.99■□□□□ 0.63
GTF3C1-205ENST00000564747 TRIM44Q96DX7 344 aaPredicted RBP18.99■□□□□ 0.63
GTF3C1-205ENST00000564747 STK31Q9BXU1 1019 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 CWC22Q9HCG8 908 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 LMBRD1Q9NUN5 540 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 FLT4P35916 1363 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 SBNO1A3KN83 1393 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 KDRP35968 1356 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-205ENST00000564747 TTC21AQ8NDW8 1320 aa18.97■□□□□ 0.63
GTF3C1-205ENST00000564747 PNMA6EA0A0J9YXQ4 647 aa18.97■□□□□ 0.63
GTF3C1-205ENST00000564747 FLIIQ13045 1269 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms