RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 HOXC9P31274 260 aa20.89■□□□□ 0.93
CCNF-204ENST00000564333 HAP1P54257 671 aaPredicted RBP20.89■□□□□ 0.93
CCNF-204ENST00000564333 ABTB2Q8N961 1025 aa20.89■□□□□ 0.93
CCNF-204ENST00000564333 RTL1A6NKG5 1358 aa20.89■□□□□ 0.93
CCNF-204ENST00000564333 USP19O94966 1318 aa20.89■□□□□ 0.93
CCNF-204ENST00000564333 MTHFSDQ2M296 383 aaKnown RBP20.88■□□□□ 0.93
CCNF-204ENST00000564333 ZBTB7BO15156 539 aaPredicted RBP20.88■□□□□ 0.93
CCNF-204ENST00000564333 NFAT5O94916 1531 aa20.88■□□□□ 0.93
CCNF-204ENST00000564333 SEC24BO95487 1268 aa20.86■□□□□ 0.93
CCNF-204ENST00000564333 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
CCNF-204ENST00000564333 FOXO3O43524 673 aa20.86■□□□□ 0.93
CCNF-204ENST00000564333 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
CCNF-204ENST00000564333 RTF1Q92541 710 aaKnown RBP20.86■□□□□ 0.93
CCNF-204ENST00000564333 C14orf37Q86TY3 774 aa20.85■□□□□ 0.93
CCNF-204ENST00000564333 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
CCNF-204ENST00000564333 PHRF1Q9P1Y6 1649 aaKnown RBP20.85■□□□□ 0.93
CCNF-204ENST00000564333 RGS12O14924 1447 aa20.85■□□□□ 0.93
CCNF-204ENST00000564333 FAM208AQ9UK61 1670 aaKnown RBP20.84■□□□□ 0.93
CCNF-204ENST00000564333 C1orf115Q9H7X2 142 aa20.84■□□□□ 0.93
CCNF-204ENST00000564333 NUCB1Q02818 461 aa20.83■□□□□ 0.93
CCNF-204ENST00000564333 UPF2Q9HAU5 1272 aaKnown RBP20.82■□□□□ 0.92
CCNF-204ENST00000564333 SLC4A3P48751 1232 aa20.81■□□□□ 0.92
CCNF-204ENST00000564333 TSPYL4Q9UJ04 414 aa20.81■□□□□ 0.92
CCNF-204ENST00000564333 HTATSF1O43719 755 aaKnown RBP20.8■□□□□ 0.92
CCNF-204ENST00000564333 ESCO1Q5FWF5 840 aa20.8■□□□□ 0.92
CCNF-204ENST00000564333 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
CCNF-204ENST00000564333 PTPRCP08575 1304 aa20.8■□□□□ 0.92
CCNF-204ENST00000564333 MAP3K5Q99683 1374 aa20.79■□□□□ 0.92
CCNF-204ENST00000564333 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
CCNF-204ENST00000564333 CHD1LQ86WJ1 897 aa20.78■□□□□ 0.92
CCNF-204ENST00000564333 LTV1Q96GA3 475 aaPredicted RBP20.78■□□□□ 0.92
CCNF-204ENST00000564333 KIF1AQ12756 1690 aa20.78■□□□□ 0.92
CCNF-204ENST00000564333 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
CCNF-204ENST00000564333 MIS18AQ9NYP9 233 aa20.78■□□□□ 0.92
CCNF-204ENST00000564333 TRPM3Q9HCF6 1732 aaPredicted RBP20.78■□□□□ 0.92
CCNF-204ENST00000564333 RGPD2P0DJD1 1756 aa20.78■□□□□ 0.92
CCNF-204ENST00000564333 MSH6P52701 1360 aa20.77■□□□□ 0.92
CCNF-204ENST00000564333 PSME1Q06323 249 aa20.77■□□□□ 0.92
CCNF-204ENST00000564333 SLIT3O75094 1523 aa20.77■□□□□ 0.91
CCNF-204ENST00000564333 GNAT3A8MTJ3 354 aa20.76■□□□□ 0.91
CCNF-204ENST00000564333 TBC1D32Q96NH3 1257 aa20.76■□□□□ 0.91
CCNF-204ENST00000564333 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
CCNF-204ENST00000564333 IP6K1Q92551 441 aa20.75■□□□□ 0.91
CCNF-204ENST00000564333 ATP10DQ9P241 1426 aa20.75■□□□□ 0.91
CCNF-204ENST00000564333 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
CCNF-204ENST00000564333 USHBP1Q8N6Y0 703 aa20.73■□□□□ 0.91
CCNF-204ENST00000564333 KCNH5Q8NCM2 988 aa20.73■□□□□ 0.91
CCNF-204ENST00000564333 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
CCNF-204ENST00000564333 NFKBIBQ15653 356 aa20.72■□□□□ 0.91
CCNF-204ENST00000564333 ANKRD45Q5TZF3 282 aa20.72■□□□□ 0.91
CCNF-204ENST00000564333 MED1Q15648 1581 aaPredicted RBP20.72■□□□□ 0.91
CCNF-204ENST00000564333 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
CCNF-204ENST00000564333 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
CCNF-204ENST00000564333 BECN1Q14457 450 aa20.71■□□□□ 0.91
CCNF-204ENST00000564333 GSE1Q14687 1217 aa20.7■□□□□ 0.91
CCNF-204ENST00000564333 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
CCNF-204ENST00000564333 ORAI2Q96SN7 254 aa20.7■□□□□ 0.9
CCNF-204ENST00000564333 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
CCNF-204ENST00000564333 MFAP1P55081 439 aaKnown RBP20.69■□□□□ 0.9
CCNF-204ENST00000564333 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
CCNF-204ENST00000564333 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
CCNF-204ENST00000564333 BMP2KLQ5H9B9 411 aa20.68■□□□□ 0.9
CCNF-204ENST00000564333 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
CCNF-204ENST00000564333 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
CCNF-204ENST00000564333 G2E3Q7L622 706 aa20.67■□□□□ 0.9
CCNF-204ENST00000564333 ANKRD44Q8N8A2 993 aa20.67■□□□□ 0.9
CCNF-204ENST00000564333 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
CCNF-204ENST00000564333 SOS1Q07889 1333 aaPredicted RBP20.67■□□□□ 0.9
CCNF-204ENST00000564333 C1orf167Q5SNV9 1468 aa20.67■□□□□ 0.9
CCNF-204ENST00000564333 XPCQ01831 940 aaPredicted RBP20.66■□□□□ 0.9
CCNF-204ENST00000564333 NBPF6Q5VWK0 638 aa20.66■□□□□ 0.9
CCNF-204ENST00000564333 NBPF4Q96M43 638 aa20.66■□□□□ 0.9
CCNF-204ENST00000564333 NCAPD2Q15021 1401 aa20.66■□□□□ 0.9
CCNF-204ENST00000564333 PROSER2Q86WR7 435 aaPredicted RBP20.66■□□□□ 0.9
CCNF-204ENST00000564333 MEIS3Q99687 375 aa20.66■□□□□ 0.9
CCNF-204ENST00000564333 C22orf23Q9BZE7 217 aa20.66■□□□□ 0.9
CCNF-204ENST00000564333 CEMIPQ8WUJ3 1361 aa20.65■□□□□ 0.9
CCNF-204ENST00000564333 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
CCNF-204ENST00000564333 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
CCNF-204ENST00000564333 RPAP2Q8IXW5 612 aaPredicted RBP20.65■□□□□ 0.9
CCNF-204ENST00000564333 DCTPP1Q9H773 170 aa20.65■□□□□ 0.9
CCNF-204ENST00000564333 CCT4P50991 539 aaKnown RBP20.65■□□□□ 0.9
CCNF-204ENST00000564333 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
CCNF-204ENST00000564333 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.9
CCNF-204ENST00000564333 GCP02774 474 aa20.63■□□□□ 0.89
CCNF-204ENST00000564333 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
CCNF-204ENST00000564333 F6X3S4 739 aa20.63■□□□□ 0.89
CCNF-204ENST00000564333 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
CCNF-204ENST00000564333 ARHGEF25Q86VW2 580 aa20.63■□□□□ 0.89
CCNF-204ENST00000564333 RGPD5Q99666 1765 aa20.62■□□□□ 0.89
CCNF-204ENST00000564333 SLC4A10Q6U841 1118 aa20.62■□□□□ 0.89
CCNF-204ENST00000564333 LRRC59Q96AG4 307 aaKnown RBP20.62■□□□□ 0.89
CCNF-204ENST00000564333 MST1RQ04912 1400 aa20.62■□□□□ 0.89
CCNF-204ENST00000564333 FLIIQ13045 1269 aa20.61■□□□□ 0.89
CCNF-204ENST00000564333 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
CCNF-204ENST00000564333 LMOD2Q6P5Q4 547 aa20.61■□□□□ 0.89
CCNF-204ENST00000564333 PXDNQ92626 1479 aa20.61■□□□□ 0.89
CCNF-204ENST00000564333 KRT28Q7Z3Y7 464 aa20.6■□□□□ 0.89
CCNF-204ENST00000564333 FKBP5Q13451 457 aaPredicted RBP20.59■□□□□ 0.89
CCNF-204ENST00000564333 NECTIN2Q92692 538 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms