RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.26
RNF40-205ENST00000563909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.88■■□□□ 1.25
RNF40-205ENST00000563909 LY75O60449 1722 aa22.88■■□□□ 1.25
RNF40-205ENST00000563909 TOMM70O94826 608 aa22.87■■□□□ 1.25
RNF40-205ENST00000563909 NSD2O96028 1365 aa22.87■■□□□ 1.25
RNF40-205ENST00000563909 IGSF1Q8N6C5 1336 aa22.86■■□□□ 1.25
RNF40-205ENST00000563909 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
RNF40-205ENST00000563909 USP31Q70CQ4 1352 aa22.84■■□□□ 1.25
RNF40-205ENST00000563909 NME9Q86XW9 330 aa22.83■■□□□ 1.25
RNF40-205ENST00000563909 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.25
RNF40-205ENST00000563909 USP47Q96K76 1375 aa22.83■■□□□ 1.25
RNF40-205ENST00000563909 LTN1O94822 1766 aa22.82■■□□□ 1.24
RNF40-205ENST00000563909 TNS4Q8IZW8 715 aa22.82■■□□□ 1.24
RNF40-205ENST00000563909 LTV1Q96GA3 475 aaPredicted RBP22.82■■□□□ 1.24
RNF40-205ENST00000563909 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
RNF40-205ENST00000563909 PCNTO95613 3336 aa22.81■■□□□ 1.24
RNF40-205ENST00000563909 PRELPP51888 382 aa22.8■■□□□ 1.24
RNF40-205ENST00000563909 ZCRB1Q8TBF4 217 aaKnown RBP22.79■■□□□ 1.24
RNF40-205ENST00000563909 KLRG1Q96E93 195 aa22.79■■□□□ 1.24
RNF40-205ENST00000563909 HTRA3P83110 453 aa22.78■■□□□ 1.24
RNF40-205ENST00000563909 JMYQ8N9B5 988 aa22.76■■□□□ 1.23
RNF40-205ENST00000563909 IP6K1Q92551 441 aa22.76■■□□□ 1.23
RNF40-205ENST00000563909 NMRK2Q9NPI5 230 aa22.76■■□□□ 1.23
RNF40-205ENST00000563909 WDR90Q96KV7 1748 aa22.74■■□□□ 1.23
RNF40-205ENST00000563909 HMGB2P26583 209 aaKnown RBP22.74■■□□□ 1.23
RNF40-205ENST00000563909 C5P01031 1676 aa22.74■■□□□ 1.23
RNF40-205ENST00000563909 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
RNF40-205ENST00000563909 USP54Q70EL1 1684 aa22.73■■□□□ 1.23
RNF40-205ENST00000563909 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
RNF40-205ENST00000563909 AMIGO3Q86WK7 504 aa22.71■■□□□ 1.23
RNF40-205ENST00000563909 RBM46Q8TBY0 533 aaKnown RBP22.71■■□□□ 1.23
RNF40-205ENST00000563909 AK7Q96M32 723 aa22.71■■□□□ 1.23
RNF40-205ENST00000563909 PHF14O94880 888 aa22.7■■□□□ 1.22
RNF40-205ENST00000563909 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
RNF40-205ENST00000563909 C16orf71Q8IYS4 520 aaPredicted RBP22.7■■□□□ 1.22
RNF40-205ENST00000563909 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
RNF40-205ENST00000563909 FAM208AQ9UK61 1670 aaKnown RBP22.68■■□□□ 1.22
RNF40-205ENST00000563909 PALLDQ8WX93 1383 aa22.68■■□□□ 1.22
RNF40-205ENST00000563909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.68■■□□□ 1.22
RNF40-205ENST00000563909 MEGF6O75095 1541 aa22.67■■□□□ 1.22
RNF40-205ENST00000563909 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
RNF40-205ENST00000563909 TMC1Q8TDI8 760 aa22.67■■□□□ 1.22
RNF40-205ENST00000563909 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
RNF40-205ENST00000563909 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
RNF40-205ENST00000563909 BCS1LQ9Y276 419 aa22.66■■□□□ 1.22
RNF40-205ENST00000563909 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
RNF40-205ENST00000563909 FSTL1Q12841 308 aa22.65■■□□□ 1.22
RNF40-205ENST00000563909 TAF1LQ8IZX4 1826 aa22.65■■□□□ 1.22
RNF40-205ENST00000563909 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
RNF40-205ENST00000563909 HOXC9P31274 260 aa22.63■■□□□ 1.21
RNF40-205ENST00000563909 AMPHP49418 695 aa22.62■■□□□ 1.21
RNF40-205ENST00000563909 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
RNF40-205ENST00000563909 EDC4Q6P2E9 1401 aaKnown RBP22.62■■□□□ 1.21
RNF40-205ENST00000563909 MAP3K19Q56UN5 1328 aa22.61■■□□□ 1.21
RNF40-205ENST00000563909 A0A0G2JLW4 131 aa22.61■■□□□ 1.21
RNF40-205ENST00000563909 NSD3Q9BZ95 1437 aa22.61■■□□□ 1.21
RNF40-205ENST00000563909 TOGARAM1Q9Y4F4 1720 aa22.61■■□□□ 1.21
RNF40-205ENST00000563909 PXDNLA1KZ92 1463 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 SSFA2P28290 1259 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 NBPF6Q5VWK0 638 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 RAPGEF4Q8WZA2 1011 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
RNF40-205ENST00000563909 NBPF4Q96M43 638 aa22.6■■□□□ 1.21
RNF40-205ENST00000563909 RGPD2P0DJD1 1756 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 MMP10P09238 476 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 FBLN1P23142 703 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 TGFB2P61812 414 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 C9orf131Q5VYM1 1079 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
RNF40-205ENST00000563909 ROCK2O75116 1388 aaKnown RBP22.59■■□□□ 1.21
RNF40-205ENST00000563909 UBR3Q6ZT12 1888 aa22.58■■□□□ 1.21
RNF40-205ENST00000563909 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
RNF40-205ENST00000563909 FCHSD2O94868 740 aa22.56■■□□□ 1.2
RNF40-205ENST00000563909 TATP17735 454 aaPredicted RBP22.56■■□□□ 1.2
RNF40-205ENST00000563909 KDM2BQ8NHM5 1336 aa22.56■■□□□ 1.2
RNF40-205ENST00000563909 PCDH11XQ9BZA7 1347 aa22.56■■□□□ 1.2
RNF40-205ENST00000563909 PCDH11YQ9BZA8 1340 aa22.56■■□□□ 1.2
RNF40-205ENST00000563909 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
RNF40-205ENST00000563909 RRAGCQ9HB90 399 aa22.55■■□□□ 1.2
RNF40-205ENST00000563909 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
RNF40-205ENST00000563909 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
RNF40-205ENST00000563909 GNPATO15228 680 aa22.54■■□□□ 1.2
RNF40-205ENST00000563909 HSPA1AP0DMV8 641 aaKnown RBP22.54■■□□□ 1.2
RNF40-205ENST00000563909 HSPA1BP0DMV9 641 aaKnown RBP22.54■■□□□ 1.2
RNF40-205ENST00000563909 COG3Q96JB2 828 aa22.54■■□□□ 1.2
RNF40-205ENST00000563909 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
RNF40-205ENST00000563909 PLEKHG2Q9H7P9 1386 aa22.53■■□□□ 1.2
RNF40-205ENST00000563909 DPEP1P16444 411 aa22.53■■□□□ 1.2
RNF40-205ENST00000563909 PIGBQ92521 554 aa22.53■■□□□ 1.2
RNF40-205ENST00000563909 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
RNF40-205ENST00000563909 KIAA1551Q9HCM1 1747 aa22.52■■□□□ 1.2
RNF40-205ENST00000563909 LOC102724428A0A0B4J2F2 783 aa22.51■■□□□ 1.19
RNF40-205ENST00000563909 CYP27B1O15528 508 aa22.51■■□□□ 1.19
RNF40-205ENST00000563909 SIK1P57059 783 aa22.51■■□□□ 1.19
RNF40-205ENST00000563909 SMC1BQ8NDV3 1235 aa22.51■■□□□ 1.19
RNF40-205ENST00000563909 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
RNF40-205ENST00000563909 SLC34A2O95436 690 aa22.5■■□□□ 1.19
RNF40-205ENST00000563909 NLGN1Q8N2Q7 840 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms