RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
NSMCE1-206ENST00000563900 EXOC5O00471 708 aa11.95□□□□□ -0.5
NSMCE1-206ENST00000563900 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
NSMCE1-206ENST00000563900 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
NSMCE1-206ENST00000563900 SBF2Q86WG5 1849 aa11.95□□□□□ -0.5
NSMCE1-206ENST00000563900 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
NSMCE1-206ENST00000563900 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-206ENST00000563900 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
NSMCE1-206ENST00000563900 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
NSMCE1-206ENST00000563900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.5
NSMCE1-206ENST00000563900 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
NSMCE1-206ENST00000563900 RALBP1Q15311 655 aa11.91□□□□□ -0.5
NSMCE1-206ENST00000563900 AEBP1Q8IUX7 1158 aa11.91□□□□□ -0.5
NSMCE1-206ENST00000563900 CYP27B1O15528 508 aa11.9□□□□□ -0.5
NSMCE1-206ENST00000563900 DIAPH1O60610 1272 aaKnown RBP11.9□□□□□ -0.5
NSMCE1-206ENST00000563900 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
NSMCE1-206ENST00000563900 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 TRIM37O94972 964 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 PTF1AQ7RTS3 328 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
NSMCE1-206ENST00000563900 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-206ENST00000563900 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
NSMCE1-206ENST00000563900 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-206ENST00000563900 PRKRIP1Q9H875 184 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-206ENST00000563900 TOGARAM1Q9Y4F4 1720 aa11.88□□□□□ -0.51
NSMCE1-206ENST00000563900 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-206ENST00000563900 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
NSMCE1-206ENST00000563900 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
NSMCE1-206ENST00000563900 KCNQ2O43526 872 aa11.86□□□□□ -0.51
NSMCE1-206ENST00000563900 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
NSMCE1-206ENST00000563900 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
NSMCE1-206ENST00000563900 RREB1Q92766 1687 aa11.86□□□□□ -0.51
NSMCE1-206ENST00000563900 HMOX1P09601 288 aa11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 PHKG2P15735 406 aa11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 BAG6P46379 1132 aa11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 AMOTQ4VCS5 1084 aa11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 BTAF1O14981 1849 aa11.85□□□□□ -0.51
NSMCE1-206ENST00000563900 PLSCR1O15162 318 aa11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 APBA3O96018 575 aa11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 ADAMTS7Q9UKP4 1686 aa11.84□□□□□ -0.51
NSMCE1-206ENST00000563900 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-206ENST00000563900 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
NSMCE1-206ENST00000563900 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
NSMCE1-206ENST00000563900 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
NSMCE1-206ENST00000563900 ITGB4P16144 1822 aa11.82□□□□□ -0.52
NSMCE1-206ENST00000563900 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-206ENST00000563900 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
NSMCE1-206ENST00000563900 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
NSMCE1-206ENST00000563900 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
NSMCE1-206ENST00000563900 PROM2Q8N271 834 aa11.81□□□□□ -0.52
NSMCE1-206ENST00000563900 MRC1P22897 1456 aa11.81□□□□□ -0.52
NSMCE1-206ENST00000563900 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 FCHSD2O94868 740 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 U2AF1L5P0DN76 240 aaPredicted RBP11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 U2AF1Q01081 240 aaKnown RBP eCLIP11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 LY75O60449 1722 aa11.8□□□□□ -0.52
NSMCE1-206ENST00000563900 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
NSMCE1-206ENST00000563900 PHACTR3Q96KR7 559 aa11.79□□□□□ -0.52
NSMCE1-206ENST00000563900 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 PIGBQ92521 554 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 PLEKHF1Q96S99 279 aa11.78□□□□□ -0.52
NSMCE1-206ENST00000563900 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
NSMCE1-206ENST00000563900 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
NSMCE1-206ENST00000563900 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-206ENST00000563900 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
NSMCE1-206ENST00000563900 MPRIPQ6WCQ1 1025 aa11.76□□□□□ -0.53
NSMCE1-206ENST00000563900 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-206ENST00000563900 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
NSMCE1-206ENST00000563900 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 LGR6Q9HBX8 967 aa11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 PALLDQ8WX93 1383 aa11.75□□□□□ -0.53
NSMCE1-206ENST00000563900 ANP32CO43423 234 aa11.74□□□□□ -0.53
NSMCE1-206ENST00000563900 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
NSMCE1-206ENST00000563900 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
NSMCE1-206ENST00000563900 ZNF831Q5JPB2 1677 aa11.74□□□□□ -0.53
NSMCE1-206ENST00000563900 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-206ENST00000563900 GNAT3A8MTJ3 354 aa11.73□□□□□ -0.53
NSMCE1-206ENST00000563900 SMARCC1Q92922 1105 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms