RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 FOXO3O43524 673 aa24.67■■□□□ 1.54
CDH5-204ENST00000563425 GAS2L2Q8NHY3 880 aa24.67■■□□□ 1.54
CDH5-204ENST00000563425 USP19O94966 1318 aa24.66■■□□□ 1.54
CDH5-204ENST00000563425 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
CDH5-204ENST00000563425 RTF1Q92541 710 aaKnown RBP24.65■■□□□ 1.54
CDH5-204ENST00000563425 KRT24Q2M2I5 525 aa24.65■■□□□ 1.54
CDH5-204ENST00000563425 HTATSF1O43719 755 aaKnown RBP24.64■■□□□ 1.53
CDH5-204ENST00000563425 SEC24BO95487 1268 aa24.64■■□□□ 1.53
CDH5-204ENST00000563425 ESCO1Q5FWF5 840 aa24.63■■□□□ 1.53
CDH5-204ENST00000563425 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
CDH5-204ENST00000563425 NUCB1Q02818 461 aa24.61■■□□□ 1.53
CDH5-204ENST00000563425 PSME1Q06323 249 aa24.61■■□□□ 1.53
CDH5-204ENST00000563425 RGS12O14924 1447 aa24.61■■□□□ 1.53
CDH5-204ENST00000563425 CACNA1FO60840 1977 aa24.6■■□□□ 1.53
CDH5-204ENST00000563425 INTS3Q68E01 1043 aaKnown RBP24.59■■□□□ 1.53
CDH5-204ENST00000563425 RGPD2P0DJD1 1756 aa24.59■■□□□ 1.53
CDH5-204ENST00000563425 IP6K1Q92551 441 aa24.59■■□□□ 1.53
CDH5-204ENST00000563425 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
CDH5-204ENST00000563425 MIS18AQ9NYP9 233 aa24.58■■□□□ 1.53
CDH5-204ENST00000563425 PTPRCP08575 1304 aa24.58■■□□□ 1.52
CDH5-204ENST00000563425 GNAT3A8MTJ3 354 aa24.57■■□□□ 1.52
CDH5-204ENST00000563425 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
CDH5-204ENST00000563425 LTV1Q96GA3 475 aaPredicted RBP24.57■■□□□ 1.52
CDH5-204ENST00000563425 C1orf115Q9H7X2 142 aa24.57■■□□□ 1.52
CDH5-204ENST00000563425 TRPM3Q9HCF6 1732 aaPredicted RBP24.57■■□□□ 1.52
CDH5-204ENST00000563425 NBR1Q14596 966 aa24.57■■□□□ 1.52
CDH5-204ENST00000563425 MAP3K5Q99683 1374 aa24.56■■□□□ 1.52
CDH5-204ENST00000563425 KCNH5Q8NCM2 988 aa24.56■■□□□ 1.52
CDH5-204ENST00000563425 KIF1AQ12756 1690 aa24.55■■□□□ 1.52
CDH5-204ENST00000563425 CHD1LQ86WJ1 897 aa24.55■■□□□ 1.52
CDH5-204ENST00000563425 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
CDH5-204ENST00000563425 DAXXQ9UER7 740 aaPredicted RBP24.55■■□□□ 1.52
CDH5-204ENST00000563425 MSH6P52701 1360 aa24.55■■□□□ 1.52
CDH5-204ENST00000563425 FAM208AQ9UK61 1670 aaKnown RBP24.55■■□□□ 1.52
CDH5-204ENST00000563425 SLIT3O75094 1523 aa24.54■■□□□ 1.52
CDH5-204ENST00000563425 ORAI2Q96SN7 254 aa24.53■■□□□ 1.52
CDH5-204ENST00000563425 UPF2Q9HAU5 1272 aaKnown RBP24.53■■□□□ 1.52
CDH5-204ENST00000563425 SLC4A3P48751 1232 aa24.52■■□□□ 1.52
CDH5-204ENST00000563425 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
CDH5-204ENST00000563425 SLC4A2P04920 1241 aa24.51■■□□□ 1.51
CDH5-204ENST00000563425 PROSER2Q86WR7 435 aaPredicted RBP24.51■■□□□ 1.51
CDH5-204ENST00000563425 TBC1D32Q96NH3 1257 aa24.51■■□□□ 1.51
CDH5-204ENST00000563425 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
CDH5-204ENST00000563425 USHBP1Q8N6Y0 703 aa24.5■■□□□ 1.51
CDH5-204ENST00000563425 IL17REQ8NFR9 667 aa24.5■■□□□ 1.51
CDH5-204ENST00000563425 LMO7Q8WWI1 1683 aa24.49■■□□□ 1.51
CDH5-204ENST00000563425 ANKRD45Q5TZF3 282 aa24.49■■□□□ 1.51
CDH5-204ENST00000563425 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
CDH5-204ENST00000563425 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
CDH5-204ENST00000563425 ATP10DQ9P241 1426 aa24.48■■□□□ 1.51
CDH5-204ENST00000563425 SOS1Q07889 1333 aaPredicted RBP24.47■■□□□ 1.51
CDH5-204ENST00000563425 C1orf167Q5SNV9 1468 aa24.47■■□□□ 1.51
CDH5-204ENST00000563425 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
CDH5-204ENST00000563425 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
CDH5-204ENST00000563425 TAF7Q15545 349 aaPredicted RBP24.46■■□□□ 1.51
CDH5-204ENST00000563425 STRCP1A6NGW2 1772 aa24.45■■□□□ 1.51
CDH5-204ENST00000563425 GCP02774 474 aa24.45■■□□□ 1.51
CDH5-204ENST00000563425 ALS2Q96Q42 1657 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 KDM3BQ7LBC6 1761 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 CAMTA1Q9Y6Y1 1673 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 XPCQ01831 940 aaPredicted RBP24.45■■□□□ 1.5
CDH5-204ENST00000563425 G2E3Q7L622 706 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 ARHGEF25Q86VW2 580 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 ANKRD44Q8N8A2 993 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 DNAJC5Q9H3Z4 198 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 C19orf44Q9H6X5 657 aa24.45■■□□□ 1.5
CDH5-204ENST00000563425 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
CDH5-204ENST00000563425 NCAPD2Q15021 1401 aa24.44■■□□□ 1.5
CDH5-204ENST00000563425 RGPD5Q99666 1765 aa24.44■■□□□ 1.5
CDH5-204ENST00000563425 MST1RQ04912 1400 aa24.43■■□□□ 1.5
CDH5-204ENST00000563425 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
CDH5-204ENST00000563425 RPAP2Q8IXW5 612 aaPredicted RBP24.43■■□□□ 1.5
CDH5-204ENST00000563425 STK31Q9BXU1 1019 aa24.43■■□□□ 1.5
CDH5-204ENST00000563425 DCTPP1Q9H773 170 aa24.43■■□□□ 1.5
CDH5-204ENST00000563425 BMP2KLQ5H9B9 411 aa24.43■■□□□ 1.5
CDH5-204ENST00000563425 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
CDH5-204ENST00000563425 CCDC30Q5VVM6 783 aa24.42■■□□□ 1.5
CDH5-204ENST00000563425 KRT28Q7Z3Y7 464 aa24.42■■□□□ 1.5
CDH5-204ENST00000563425 BECN1Q14457 450 aa24.41■■□□□ 1.5
CDH5-204ENST00000563425 MEIS3Q99687 375 aa24.41■■□□□ 1.5
CDH5-204ENST00000563425 CCT4P50991 539 aaKnown RBP24.4■■□□□ 1.5
CDH5-204ENST00000563425 CEP85Q6P2H3 762 aa24.4■■□□□ 1.5
CDH5-204ENST00000563425 USP35Q9P2H5 1018 aa24.4■■□□□ 1.5
CDH5-204ENST00000563425 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.5
CDH5-204ENST00000563425 F6X3S4 739 aa24.37■■□□□ 1.49
CDH5-204ENST00000563425 MFAP1P55081 439 aaKnown RBP24.37■■□□□ 1.49
CDH5-204ENST00000563425 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
CDH5-204ENST00000563425 C22orf23Q9BZE7 217 aa24.37■■□□□ 1.49
CDH5-204ENST00000563425 DCCP43146 1447 aa24.37■■□□□ 1.49
CDH5-204ENST00000563425 FLIIQ13045 1269 aa24.37■■□□□ 1.49
CDH5-204ENST00000563425 SLC4A10Q6U841 1118 aa24.36■■□□□ 1.49
CDH5-204ENST00000563425 PLEKHO1Q53GL0 409 aaPredicted RBP24.35■■□□□ 1.49
CDH5-204ENST00000563425 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
CDH5-204ENST00000563425 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
CDH5-204ENST00000563425 ANKRD24Q8TF21 1146 aa24.35■■□□□ 1.49
CDH5-204ENST00000563425 LGR6Q9HBX8 967 aa24.35■■□□□ 1.49
CDH5-204ENST00000563425 TMEM94Q12767 1356 aa24.35■■□□□ 1.49
CDH5-204ENST00000563425 AMOTQ4VCS5 1084 aa24.34■■□□□ 1.49
CDH5-204ENST00000563425 PXDNLA1KZ92 1463 aa24.34■■□□□ 1.49
CDH5-204ENST00000563425 ZNF530Q6P9A1 599 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms