RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 V9GY48 417 aaPredicted RBP10.12□□□□□ -0.79
CHD9-205ENST00000562785 CARNS1A5YM72 827 aa10.11□□□□□ -0.79
CHD9-205ENST00000562785 DKK1O94907 266 aa10.11□□□□□ -0.79
CHD9-205ENST00000562785 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
CHD9-205ENST00000562785 NR5A1Q13285 461 aa10.11□□□□□ -0.79
CHD9-205ENST00000562785 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
CHD9-205ENST00000562785 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
CHD9-205ENST00000562785 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
CHD9-205ENST00000562785 SCTRP47872 440 aa10.1□□□□□ -0.79
CHD9-205ENST00000562785 DPYDQ12882 1025 aa10.1□□□□□ -0.79
CHD9-205ENST00000562785 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
CHD9-205ENST00000562785 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
CHD9-205ENST00000562785 PKD2L1Q9P0L9 805 aa10.1□□□□□ -0.79
CHD9-205ENST00000562785 BRD1O95696 1058 aa10.09□□□□□ -0.79
CHD9-205ENST00000562785 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
CHD9-205ENST00000562785 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
CHD9-205ENST00000562785 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
CHD9-205ENST00000562785 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
CHD9-205ENST00000562785 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
CHD9-205ENST00000562785 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
CHD9-205ENST00000562785 NR3C2P08235 984 aa10.07□□□□□ -0.8
CHD9-205ENST00000562785 SWI5Q1ZZU3 235 aa10.07□□□□□ -0.8
CHD9-205ENST00000562785 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
CHD9-205ENST00000562785 CCDC102BQ68D86 513 aa10.07□□□□□ -0.8
CHD9-205ENST00000562785 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
CHD9-205ENST00000562785 PSME1Q06323 249 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 FOXC1Q12948 553 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 TPCN2Q8NHX9 752 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 OSBPL3Q9H4L5 887 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 CCDC180Q9P1Z9 1646 aa10.06□□□□□ -0.8
CHD9-205ENST00000562785 PATL2C9JE40 543 aaKnown RBP10.05□□□□□ -0.8
CHD9-205ENST00000562785 ALDH1A1P00352 501 aa10.05□□□□□ -0.8
CHD9-205ENST00000562785 SEC13P55735 322 aa10.05□□□□□ -0.8
CHD9-205ENST00000562785 KCNA1Q09470 495 aa10.05□□□□□ -0.8
CHD9-205ENST00000562785 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
CHD9-205ENST00000562785 CLP1Q92989 425 aaKnown RBP10.05□□□□□ -0.8
CHD9-205ENST00000562785 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
CHD9-205ENST00000562785 GDF9O60383 454 aa10.04□□□□□ -0.8
CHD9-205ENST00000562785 LILRA1O75019 489 aa10.04□□□□□ -0.8
CHD9-205ENST00000562785 B4GALNT3Q6L9W6 998 aa10.04□□□□□ -0.8
CHD9-205ENST00000562785 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
CHD9-205ENST00000562785 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
CHD9-205ENST00000562785 MYT1Q01538 1121 aa10.03□□□□□ -0.8
CHD9-205ENST00000562785 NNTQ13423 1086 aa10.03□□□□□ -0.8
CHD9-205ENST00000562785 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
CHD9-205ENST00000562785 PGPEP1Q9NXJ5 209 aa10.03□□□□□ -0.8
CHD9-205ENST00000562785 SLAIN2Q9P270 581 aa10.03□□□□□ -0.8
CHD9-205ENST00000562785 M0R2N6 131 aa10.02□□□□□ -0.81
CHD9-205ENST00000562785 PODXL2Q9NZ53 605 aa10.02□□□□□ -0.81
CHD9-205ENST00000562785 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
CHD9-205ENST00000562785 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
CHD9-205ENST00000562785 WASLO00401 505 aaPredicted RBP10.01□□□□□ -0.81
CHD9-205ENST00000562785 CYP2U1Q7Z449 544 aa10.01□□□□□ -0.81
CHD9-205ENST00000562785 TMEM229AB2RXF0 380 aa10□□□□□ -0.81
CHD9-205ENST00000562785 SCNN1DP51172 638 aa10□□□□□ -0.81
CHD9-205ENST00000562785 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
CHD9-205ENST00000562785 SSFA2P28290 1259 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
CHD9-205ENST00000562785 PRR20EP86478 221 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 PRR20CP86479 221 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 PRR20DP86480 221 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 PRR20BP86481 221 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 PRR20AP86496 221 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 PHLDB3Q6NSJ2 640 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 CYP4X1Q8N118 509 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 ZNF358Q9NW07 568 aa9.99□□□□□ -0.81
CHD9-205ENST00000562785 TTC24A2A3L6 582 aaPredicted RBP9.98□□□□□ -0.81
CHD9-205ENST00000562785 J3QL48 77 aa9.98□□□□□ -0.81
CHD9-205ENST00000562785 TNFRSF10AO00220 468 aa9.98□□□□□ -0.81
CHD9-205ENST00000562785 GDF10P55107 478 aa9.98□□□□□ -0.81
CHD9-205ENST00000562785 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
CHD9-205ENST00000562785 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHD9-205ENST00000562785 KLF16Q9BXK1 252 aaPredicted RBP9.98□□□□□ -0.81
CHD9-205ENST00000562785 GNRH1P01148 92 aa9.97□□□□□ -0.81
CHD9-205ENST00000562785 ATP2B4P23634 1241 aa9.97□□□□□ -0.81
CHD9-205ENST00000562785 INHAP05111 366 aa9.96□□□□□ -0.82
CHD9-205ENST00000562785 ADH1AP07327 375 aa9.96□□□□□ -0.82
CHD9-205ENST00000562785 SMPD1P17405 629 aa9.96□□□□□ -0.82
CHD9-205ENST00000562785 OCLNQ16625 522 aa9.96□□□□□ -0.82
CHD9-205ENST00000562785 TSEN2Q8NCE0 465 aaKnown RBP9.96□□□□□ -0.82
CHD9-205ENST00000562785 ETNK1Q9HBU6 452 aa9.96□□□□□ -0.82
CHD9-205ENST00000562785 GNEQ9Y223 722 aaKnown RBP9.96□□□□□ -0.82
CHD9-205ENST00000562785 STAU1O95793 577 aaKnown RBP9.95□□□□□ -0.82
CHD9-205ENST00000562785 C1orf216Q8TAB5 229 aa9.95□□□□□ -0.82
CHD9-205ENST00000562785 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
CHD9-205ENST00000562785 BACH1O14867 736 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 PRMT3O60678 531 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 RGS20O76081 388 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
CHD9-205ENST00000562785 TIMP2P16035 220 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 ESCO1Q5FWF5 840 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 Q6ZVU0 165 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 CXXC1Q9P0U4 656 aaPredicted RBP9.94□□□□□ -0.82
CHD9-205ENST00000562785 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
CHD9-205ENST00000562785 WEE1P30291 646 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 EPHA4P54764 986 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 WDR4P57081 412 aaKnown RBP9.93□□□□□ -0.82
CHD9-205ENST00000562785 CBLBQ13191 982 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 TXNDC2Q86VQ3 553 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms