RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
TPM1-230ENST00000561266 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
TPM1-230ENST00000561266 IGSF1Q8N6C5 1336 aa18.9■□□□□ 0.62
TPM1-230ENST00000561266 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
TPM1-230ENST00000561266 ACSBG1Q96GR2 724 aa18.89■□□□□ 0.61
TPM1-230ENST00000561266 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
TPM1-230ENST00000561266 APBA3O96018 575 aa18.88■□□□□ 0.61
TPM1-230ENST00000561266 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
TPM1-230ENST00000561266 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
TPM1-230ENST00000561266 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
TPM1-230ENST00000561266 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
TPM1-230ENST00000561266 NHSQ6T4R5 1651 aa18.87■□□□□ 0.61
TPM1-230ENST00000561266 CAMKK2Q96RR4 588 aa18.87■□□□□ 0.61
TPM1-230ENST00000561266 DOT1LQ8TEK3 1739 aa18.86■□□□□ 0.61
TPM1-230ENST00000561266 CYP27B1O15528 508 aa18.86■□□□□ 0.61
TPM1-230ENST00000561266 PPP2R1AP30153 589 aa18.85■□□□□ 0.61
TPM1-230ENST00000561266 BAG6P46379 1132 aa18.85■□□□□ 0.61
TPM1-230ENST00000561266 BCL11BQ9C0K0 894 aaPredicted RBP18.85■□□□□ 0.61
TPM1-230ENST00000561266 BTAF1O14981 1849 aa18.85■□□□□ 0.61
TPM1-230ENST00000561266 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
TPM1-230ENST00000561266 RREB1Q92766 1687 aa18.84■□□□□ 0.61
TPM1-230ENST00000561266 PARD3Q8TEW0 1356 aa18.82■□□□□ 0.6
TPM1-230ENST00000561266 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
TPM1-230ENST00000561266 NUP188Q5SRE5 1749 aa18.82■□□□□ 0.6
TPM1-230ENST00000561266 PROM2Q8N271 834 aa18.81■□□□□ 0.6
TPM1-230ENST00000561266 ITGB4P16144 1822 aa18.81■□□□□ 0.6
TPM1-230ENST00000561266 KDRP35968 1356 aa18.81■□□□□ 0.6
TPM1-230ENST00000561266 DIAPH1O60610 1272 aaKnown RBP18.8■□□□□ 0.6
TPM1-230ENST00000561266 HMOX1P09601 288 aa18.8■□□□□ 0.6
TPM1-230ENST00000561266 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
TPM1-230ENST00000561266 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
TPM1-230ENST00000561266 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
TPM1-230ENST00000561266 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
TPM1-230ENST00000561266 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
TPM1-230ENST00000561266 PLSCR1O15162 318 aa18.77■□□□□ 0.6
TPM1-230ENST00000561266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.65e-8■■■■□ 19.9
TPM1-230ENST00000561266 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
TPM1-230ENST00000561266 PHKG2P15735 406 aa18.76■□□□□ 0.59
TPM1-230ENST00000561266 NKX1-1Q15270 411 aaPredicted RBP18.76■□□□□ 0.59
TPM1-230ENST00000561266 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
TPM1-230ENST00000561266 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
TPM1-230ENST00000561266 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
TPM1-230ENST00000561266 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
TPM1-230ENST00000561266 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
TPM1-230ENST00000561266 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
TPM1-230ENST00000561266 PLEKHO1Q53GL0 409 aaPredicted RBP18.72■□□□□ 0.59
TPM1-230ENST00000561266 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
TPM1-230ENST00000561266 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
TPM1-230ENST00000561266 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
TPM1-230ENST00000561266 LY75O60449 1722 aa18.71■□□□□ 0.59
TPM1-230ENST00000561266 KCNQ4P56696 695 aa18.71■□□□□ 0.59
TPM1-230ENST00000561266 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
TPM1-230ENST00000561266 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
TPM1-230ENST00000561266 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
TPM1-230ENST00000561266 PIGBQ92521 554 aa18.7■□□□□ 0.58
TPM1-230ENST00000561266 LRRC4BQ9NT99 713 aa18.7■□□□□ 0.58
TPM1-230ENST00000561266 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
TPM1-230ENST00000561266 RALBP1Q15311 655 aa18.69■□□□□ 0.58
TPM1-230ENST00000561266 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
TPM1-230ENST00000561266 CFAP53Q96M91 514 aa18.69■□□□□ 0.58
TPM1-230ENST00000561266 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
TPM1-230ENST00000561266 PAPPAQ13219 1627 aa18.68■□□□□ 0.58
TPM1-230ENST00000561266 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
TPM1-230ENST00000561266 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
TPM1-230ENST00000561266 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
TPM1-230ENST00000561266 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
TPM1-230ENST00000561266 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
TPM1-230ENST00000561266 U2AF1L5P0DN76 240 aaPredicted RBP18.65■□□□□ 0.58
TPM1-230ENST00000561266 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
TPM1-230ENST00000561266 U2AF1Q01081 240 aaKnown RBP eCLIP18.65■□□□□ 0.586e-9■■■■□ 21.7
TPM1-230ENST00000561266 ADAMTS7Q9UKP4 1686 aa18.64■□□□□ 0.57
TPM1-230ENST00000561266 DCAF5Q96JK2 942 aa18.64■□□□□ 0.57
TPM1-230ENST00000561266 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
TPM1-230ENST00000561266 ASAP1Q9ULH1 1129 aa18.64■□□□□ 0.57
TPM1-230ENST00000561266 MYBBP1AQ9BQG0 1328 aaKnown RBP18.64■□□□□ 0.57
TPM1-230ENST00000561266 TAF1LQ8IZX4 1826 aa18.63■□□□□ 0.57
TPM1-230ENST00000561266 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
TPM1-230ENST00000561266 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
TPM1-230ENST00000561266 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
TPM1-230ENST00000561266 TUBGCP6Q96RT7 1819 aa18.63■□□□□ 0.57
TPM1-230ENST00000561266 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
TPM1-230ENST00000561266 ATG3Q9NT62 314 aa18.62■□□□□ 0.57
TPM1-230ENST00000561266 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
TPM1-230ENST00000561266 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
TPM1-230ENST00000561266 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
TPM1-230ENST00000561266 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
TPM1-230ENST00000561266 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
TPM1-230ENST00000561266 NBPF14Q5TI25 921 aa18.6■□□□□ 0.57
TPM1-230ENST00000561266 DLG5Q8TDM6 1919 aa18.6■□□□□ 0.57
TPM1-230ENST00000561266 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
TPM1-230ENST00000561266 SRCAPQ6ZRS2 3230 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 FCHSD2O94868 740 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 CCDC184Q52MB2 194 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 NFATC2IPQ8NCF5 419 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 C5P01031 1676 aa18.59■□□□□ 0.57
TPM1-230ENST00000561266 SLC15A2Q16348 729 aa18.58■□□□□ 0.56
TPM1-230ENST00000561266 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.56
TPM1-230ENST00000561266 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms