RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 LARP1Q6PKG0 1096 aaKnown RBP29.06■■■□□ 2.24
SNX22-205ENST00000560945 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
SNX22-205ENST00000560945 BTG4Q9NY30 223 aa29.06■■■□□ 2.24
SNX22-205ENST00000560945 NEFLP07196 543 aa29.05■■■□□ 2.24
SNX22-205ENST00000560945 ZNF853P0CG23 659 aa29.05■■■□□ 2.24
SNX22-205ENST00000560945 TOM1L2Q6ZVM7 507 aa29.05■■■□□ 2.24
SNX22-205ENST00000560945 MAP3K5Q99683 1374 aa29.05■■■□□ 2.24
SNX22-205ENST00000560945 EXOSC9Q06265 439 aaKnown RBP29.04■■■□□ 2.24
SNX22-205ENST00000560945 CRB1P82279 1406 aa29.04■■■□□ 2.24
SNX22-205ENST00000560945 GNAT3A8MTJ3 354 aa29.04■■■□□ 2.24
SNX22-205ENST00000560945 CALD1Q05682 793 aaKnown RBP29.03■■■□□ 2.24
SNX22-205ENST00000560945 PLEKHO1Q53GL0 409 aaPredicted RBP29.03■■■□□ 2.24
SNX22-205ENST00000560945 RTF1Q92541 710 aaKnown RBP29.03■■■□□ 2.24
SNX22-205ENST00000560945 IFT57Q9NWB7 429 aa29.03■■■□□ 2.24
SNX22-205ENST00000560945 COL14A1Q05707 1796 aaKnown RBP29.03■■■□□ 2.24
SNX22-205ENST00000560945 JCADQ9P266 1359 aa29.02■■■□□ 2.24
SNX22-205ENST00000560945 RRP1P56182 461 aaKnown RBP29.02■■■□□ 2.24
SNX22-205ENST00000560945 ZNF530Q6P9A1 599 aaPredicted RBP29.02■■■□□ 2.24
SNX22-205ENST00000560945 MBIPQ9NS73 344 aa29.02■■■□□ 2.24
SNX22-205ENST00000560945 EVA1CP58658 441 aa29.01■■■□□ 2.24
SNX22-205ENST00000560945 IL17REQ8NFR9 667 aa29.01■■■□□ 2.24
SNX22-205ENST00000560945 RAPGEF4Q8WZA2 1011 aa29.01■■■□□ 2.24
SNX22-205ENST00000560945 GNAI1P63096 354 aa29■■■□□ 2.23
SNX22-205ENST00000560945 CFAP44Q96MT7 982 aa29■■■□□ 2.23
SNX22-205ENST00000560945 PLIN1O60240 522 aa28.99■■■□□ 2.23
SNX22-205ENST00000560945 TATP17735 454 aaPredicted RBP28.99■■■□□ 2.23
SNX22-205ENST00000560945 AMOTQ4VCS5 1084 aa28.99■■■□□ 2.23
SNX22-205ENST00000560945 HTATSF1O43719 755 aaKnown RBP28.98■■■□□ 2.23
SNX22-205ENST00000560945 BCAR3O75815 825 aa28.98■■■□□ 2.23
SNX22-205ENST00000560945 LRRC37A3O60309 1634 aa28.98■■■□□ 2.23
SNX22-205ENST00000560945 LGR6Q9HBX8 967 aa28.97■■■□□ 2.23
SNX22-205ENST00000560945 FBXO41Q8TF61 875 aa28.97■■■□□ 2.23
SNX22-205ENST00000560945 MIS18AQ9NYP9 233 aa28.97■■■□□ 2.23
SNX22-205ENST00000560945 AKAP4Q5JQC9 854 aa28.96■■■□□ 2.23
SNX22-205ENST00000560945 CARD10Q9BWT7 1032 aa28.96■■■□□ 2.23
SNX22-205ENST00000560945 CHL1O00533 1208 aa28.94■■■□□ 2.22
SNX22-205ENST00000560945 USP35Q9P2H5 1018 aa28.94■■■□□ 2.22
SNX22-205ENST00000560945 PLCH1Q4KWH8 1693 aa28.94■■■□□ 2.22
SNX22-205ENST00000560945 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
SNX22-205ENST00000560945 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
SNX22-205ENST00000560945 C1orf141Q5JVX7 400 aa28.92■■■□□ 2.22
SNX22-205ENST00000560945 TSPYL6Q8N831 410 aa28.92■■■□□ 2.22
SNX22-205ENST00000560945 BCL2L13Q9BXK5 485 aa28.92■■■□□ 2.22
SNX22-205ENST00000560945 CEMIPQ8WUJ3 1361 aa28.91■■■□□ 2.22
SNX22-205ENST00000560945 OVOS2A0A0G2JMS6 1433 aa28.91■■■□□ 2.22
SNX22-205ENST00000560945 KRT24Q2M2I5 525 aa28.9■■■□□ 2.22
SNX22-205ENST00000560945 ELL2O00472 640 aaPredicted RBP28.9■■■□□ 2.22
SNX22-205ENST00000560945 C8orf58Q8NAV2 365 aa28.9■■■□□ 2.22
SNX22-205ENST00000560945 SPG7Q9UQ90 795 aa28.9■■■□□ 2.22
SNX22-205ENST00000560945 SPATA31A6Q5VVP1 1343 aa28.89■■■□□ 2.21
SNX22-205ENST00000560945 PKD1L3Q7Z443 1732 aa28.89■■■□□ 2.21
SNX22-205ENST00000560945 RNMTO43148 476 aaKnown RBP28.88■■■□□ 2.21
SNX22-205ENST00000560945 CYP27B1O15528 508 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 PHKG2P15735 406 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.87■■■□□ 2.21
SNX22-205ENST00000560945 TSPYL4Q9UJ04 414 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 LRP6O75581 1613 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 NRAPQ86VF7 1730 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 IL2RBP14784 551 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 C20orf194Q5TEA3 1177 aa28.87■■■□□ 2.21
SNX22-205ENST00000560945 PARP4Q9UKK3 1724 aaKnown RBP28.86■■■□□ 2.21
SNX22-205ENST00000560945 CT47B1P0C2W7 299 aaPredicted RBP28.85■■■□□ 2.21
SNX22-205ENST00000560945 KDM6AO15550 1401 aaPredicted RBP28.85■■■□□ 2.21
SNX22-205ENST00000560945 VAMP4O75379 141 aa28.84■■■□□ 2.21
SNX22-205ENST00000560945 TAF7Q15545 349 aaPredicted RBP28.84■■■□□ 2.21
SNX22-205ENST00000560945 SLIT2O94813 1529 aa28.84■■■□□ 2.21
SNX22-205ENST00000560945 SSH1Q8WYL5 1049 aa28.83■■■□□ 2.21
SNX22-205ENST00000560945 PLEKHG2Q9H7P9 1386 aa28.83■■■□□ 2.21
SNX22-205ENST00000560945 TWISTNBQ3B726 338 aaPredicted RBP28.83■■■□□ 2.21
SNX22-205ENST00000560945 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
SNX22-205ENST00000560945 ZCRB1Q8TBF4 217 aaKnown RBP28.82■■■□□ 2.2
SNX22-205ENST00000560945 C8orf37Q96NL8 207 aa28.82■■■□□ 2.2
SNX22-205ENST00000560945 ADAMTS7Q9UKP4 1686 aa28.82■■■□□ 2.2
SNX22-205ENST00000560945 DISP2A7MBM2 1401 aa28.8■■■□□ 2.2
SNX22-205ENST00000560945 TCERG1O14776 1098 aaKnown RBP28.8■■■□□ 2.2
SNX22-205ENST00000560945 FRAT1Q92837 279 aaPredicted RBP28.8■■■□□ 2.2
SNX22-205ENST00000560945 TNNQ9UQP3 1299 aa28.8■■■□□ 2.2
SNX22-205ENST00000560945 VIRMAQ69YN4 1812 aaKnown RBP28.8■■■□□ 2.2
SNX22-205ENST00000560945 TEFQ10587 303 aa28.79■■■□□ 2.2
SNX22-205ENST00000560945 SMC4Q9NTJ3 1288 aa28.79■■■□□ 2.2
SNX22-205ENST00000560945 SHANK3Q9BYB0 1731 aa28.79■■■□□ 2.2
SNX22-205ENST00000560945 KCNQ3O43525 872 aa28.78■■■□□ 2.2
SNX22-205ENST00000560945 EXOC6Q8TAG9 804 aa28.78■■■□□ 2.2
SNX22-205ENST00000560945 MEX3CQ5U5Q3 659 aaKnown RBP28.77■■■□□ 2.2
SNX22-205ENST00000560945 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.76■■■□□ 2.19
SNX22-205ENST00000560945 NGLY1Q96IV0 654 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 NWD2Q9ULI1 1742 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 SPATA31A1Q5TZJ5 1347 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 PCDH11XQ9BZA7 1347 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 PCDH11YQ9BZA8 1340 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 DDX54Q8TDD1 881 aaKnown RBP28.76■■■□□ 2.19
SNX22-205ENST00000560945 CRBNQ96SW2 442 aa28.76■■■□□ 2.19
SNX22-205ENST00000560945 SCN11AQ9UI33 1791 aa28.74■■■□□ 2.19
SNX22-205ENST00000560945 BCL9LQ86UU0 1499 aa28.74■■■□□ 2.19
SNX22-205ENST00000560945 BTBD11A6QL63 1104 aa28.73■■■□□ 2.19
SNX22-205ENST00000560945 BABAM1Q9NWV8 329 aa28.73■■■□□ 2.19
SNX22-205ENST00000560945 CANXP27824 592 aaKnown RBP28.73■■■□□ 2.19
SNX22-205ENST00000560945 ALDH1L2Q3SY69 923 aa28.73■■■□□ 2.19
SNX22-205ENST00000560945 DCAF5Q96JK2 942 aa28.73■■■□□ 2.19
SNX22-205ENST00000560945 SIPA1L3O60292 1781 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms