RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
SPG11-215ENST00000559193 MRE11P49959 708 aa20.58■□□□□ 0.89
SPG11-215ENST00000559193 C16orf71Q8IYS4 520 aaPredicted RBP20.58■□□□□ 0.89
SPG11-215ENST00000559193 GAS2L2Q8NHY3 880 aa20.58■□□□□ 0.89
SPG11-215ENST00000559193 KIAA0232Q92628 1395 aa20.58■□□□□ 0.89
SPG11-215ENST00000559193 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.88
SPG11-215ENST00000559193 CEP85Q6P2H3 762 aa20.58■□□□□ 0.88
SPG11-215ENST00000559193 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.57■□□□□ 0.88
SPG11-215ENST00000559193 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
SPG11-215ENST00000559193 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
SPG11-215ENST00000559193 NALCNQ8IZF0 1738 aa20.57■□□□□ 0.88
SPG11-215ENST00000559193 ACEP12821 1306 aa20.56■□□□□ 0.88
SPG11-215ENST00000559193 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
SPG11-215ENST00000559193 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
SPG11-215ENST00000559193 RPAP2Q8IXW5 612 aaPredicted RBP20.56■□□□□ 0.88
SPG11-215ENST00000559193 ADAMTS13Q76LX8 1427 aa20.56■□□□□ 0.88
SPG11-215ENST00000559193 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
SPG11-215ENST00000559193 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 GRPEL1Q9HAV7 217 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 CRB1P82279 1406 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 TNRQ92752 1358 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 PTPRCP08575 1304 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 USP6P35125 1406 aa20.55■□□□□ 0.88
SPG11-215ENST00000559193 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
SPG11-215ENST00000559193 UBR1Q8IWV7 1749 aa20.54■□□□□ 0.88
SPG11-215ENST00000559193 MEIS3Q99687 375 aa20.54■□□□□ 0.88
SPG11-215ENST00000559193 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
SPG11-215ENST00000559193 SSFA2P28290 1259 aa20.53■□□□□ 0.88
SPG11-215ENST00000559193 PLEKHG3A1L390 1219 aa20.53■□□□□ 0.88
SPG11-215ENST00000559193 USP31Q70CQ4 1352 aa20.53■□□□□ 0.88
SPG11-215ENST00000559193 RABEP1Q15276 862 aa20.52■□□□□ 0.88
SPG11-215ENST00000559193 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
SPG11-215ENST00000559193 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.88
SPG11-215ENST00000559193 EIF5BO60841 1220 aaKnown RBP20.52■□□□□ 0.88
SPG11-215ENST00000559193 NUTM2FA1L443 756 aa20.51■□□□□ 0.87
SPG11-215ENST00000559193 SKOR2Q2VWA4 1001 aaPredicted RBP20.51■□□□□ 0.87
SPG11-215ENST00000559193 SDSP20132 328 aa20.51■□□□□ 0.87
SPG11-215ENST00000559193 PTMSP20962 102 aa20.51■□□□□ 0.87
SPG11-215ENST00000559193 GAS2L3Q86XJ1 694 aa20.5■□□□□ 0.87
SPG11-215ENST00000559193 CLEC17AQ6ZS10 378 aa20.5■□□□□ 0.87
SPG11-215ENST00000559193 SSH2Q76I76 1423 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 ARHGEF10O15013 1369 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 APBB1O00213 710 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
SPG11-215ENST00000559193 RIMS1Q86UR5 1692 aaKnown RBP20.48■□□□□ 0.87
SPG11-215ENST00000559193 SOX12O15370 315 aa20.48■□□□□ 0.87
SPG11-215ENST00000559193 FOXO3O43524 673 aa20.48■□□□□ 0.87
SPG11-215ENST00000559193 G2E3Q7L622 706 aa20.46■□□□□ 0.87
SPG11-215ENST00000559193 MTHFSDQ2M296 383 aaKnown RBP20.46■□□□□ 0.87
SPG11-215ENST00000559193 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
SPG11-215ENST00000559193 FMN2Q9NZ56 1722 aa20.46■□□□□ 0.87
SPG11-215ENST00000559193 BAG4O95429 457 aaKnown RBP20.45■□□□□ 0.86
SPG11-215ENST00000559193 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
SPG11-215ENST00000559193 LTKP29376 864 aa20.45■□□□□ 0.86
SPG11-215ENST00000559193 F6X3S4 739 aa20.44■□□□□ 0.86
SPG11-215ENST00000559193 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
SPG11-215ENST00000559193 CASC1Q6TDU7 716 aa20.44■□□□□ 0.86
SPG11-215ENST00000559193 KDRP35968 1356 aa20.43■□□□□ 0.86
SPG11-215ENST00000559193 HMMRO75330 724 aa20.43■□□□□ 0.86
SPG11-215ENST00000559193 CLCN1P35523 988 aa20.43■□□□□ 0.86
SPG11-215ENST00000559193 GOLGA6L22H0YM25 854 aa20.42■□□□□ 0.86
SPG11-215ENST00000559193 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
SPG11-215ENST00000559193 SLC4A10Q6U841 1118 aa20.42■□□□□ 0.86
SPG11-215ENST00000559193 CEP170BQ9Y4F5 1589 aaPredicted RBP20.42■□□□□ 0.86
SPG11-215ENST00000559193 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
SPG11-215ENST00000559193 FLT4P35916 1363 aa20.42■□□□□ 0.86
SPG11-215ENST00000559193 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
SPG11-215ENST00000559193 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
SPG11-215ENST00000559193 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
SPG11-215ENST00000559193 KLHL40Q2TBA0 621 aa20.41■□□□□ 0.86
SPG11-215ENST00000559193 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
SPG11-215ENST00000559193 REC8O95072 547 aa20.4■□□□□ 0.86
SPG11-215ENST00000559193 PDE1AP54750 535 aa20.4■□□□□ 0.86
SPG11-215ENST00000559193 NUCB2P80303 420 aa20.4■□□□□ 0.86
SPG11-215ENST00000559193 AK9Q5TCS8 1911 aa20.4■□□□□ 0.86
SPG11-215ENST00000559193 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.86
SPG11-215ENST00000559193 ERC2O15083 957 aa20.39■□□□□ 0.85
SPG11-215ENST00000559193 PKP1Q13835 747 aa20.39■□□□□ 0.85
SPG11-215ENST00000559193 SLC26A8Q96RN1 970 aa20.39■□□□□ 0.85
SPG11-215ENST00000559193 EYA1Q99502 592 aa20.39■□□□□ 0.85
SPG11-215ENST00000559193 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.85
SPG11-215ENST00000559193 LRRC37A3O60309 1634 aa20.39■□□□□ 0.85
SPG11-215ENST00000559193 IBTKQ9P2D0 1353 aaPredicted RBP20.38■□□□□ 0.85
SPG11-215ENST00000559193 ST18O60284 1047 aa20.38■□□□□ 0.85
SPG11-215ENST00000559193 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
SPG11-215ENST00000559193 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
SPG11-215ENST00000559193 SALL3Q9BXA9 1300 aa20.37■□□□□ 0.85
SPG11-215ENST00000559193 KIF13AQ9H1H9 1805 aa20.37■□□□□ 0.85
SPG11-215ENST00000559193 FAM208AQ9UK61 1670 aaKnown RBP20.37■□□□□ 0.85
SPG11-215ENST00000559193 GNAI2P04899 355 aa20.37■□□□□ 0.85
SPG11-215ENST00000559193 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
SPG11-215ENST00000559193 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
SPG11-215ENST00000559193 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
SPG11-215ENST00000559193 PIK3C2AO00443 1686 aa20.36■□□□□ 0.85
SPG11-215ENST00000559193 ESPNB1AK53 854 aa20.35■□□□□ 0.85
SPG11-215ENST00000559193 XRN1Q8IZH2 1706 aaKnown RBP20.35■□□□□ 0.85
SPG11-215ENST00000559193 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
SPG11-215ENST00000559193 AMPHP49418 695 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms