RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
CPNE6-210ENST00000558995 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
CPNE6-210ENST00000558995 ABCC4O15439 1325 aa16.78■□□□□ 0.28
CPNE6-210ENST00000558995 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.28
CPNE6-210ENST00000558995 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
CPNE6-210ENST00000558995 ZNF142P52746 1687 aaPredicted RBP16.77■□□□□ 0.28
CPNE6-210ENST00000558995 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
CPNE6-210ENST00000558995 FAM83GA6ND36 823 aa16.77■□□□□ 0.27
CPNE6-210ENST00000558995 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.27
CPNE6-210ENST00000558995 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
CPNE6-210ENST00000558995 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
CPNE6-210ENST00000558995 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
CPNE6-210ENST00000558995 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
CPNE6-210ENST00000558995 ARXQ96QS3 562 aa16.76■□□□□ 0.27
CPNE6-210ENST00000558995 NLRP6P59044 892 aa16.75■□□□□ 0.27
CPNE6-210ENST00000558995 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
CPNE6-210ENST00000558995 SETD1BQ9UPS6 1966 aaKnown RBP16.75■□□□□ 0.27
CPNE6-210ENST00000558995 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
CPNE6-210ENST00000558995 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
CPNE6-210ENST00000558995 ANKRD45Q5TZF3 282 aa16.75■□□□□ 0.27
CPNE6-210ENST00000558995 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
CPNE6-210ENST00000558995 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
CPNE6-210ENST00000558995 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
CPNE6-210ENST00000558995 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
CPNE6-210ENST00000558995 CHMP5Q9NZZ3 219 aa16.73■□□□□ 0.27
CPNE6-210ENST00000558995 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
CPNE6-210ENST00000558995 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
CPNE6-210ENST00000558995 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
CPNE6-210ENST00000558995 SIRT2Q8IXJ6 389 aa16.72■□□□□ 0.27
CPNE6-210ENST00000558995 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
CPNE6-210ENST00000558995 HSCBQ8IWL3 235 aa16.72■□□□□ 0.27
CPNE6-210ENST00000558995 ABTB2Q8N961 1025 aa16.72■□□□□ 0.27
CPNE6-210ENST00000558995 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
CPNE6-210ENST00000558995 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
CPNE6-210ENST00000558995 SPRYD3Q8NCJ5 442 aa16.71■□□□□ 0.27
CPNE6-210ENST00000558995 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.26
CPNE6-210ENST00000558995 AMPHP49418 695 aa16.7■□□□□ 0.26
CPNE6-210ENST00000558995 SNX21Q969T3 373 aa16.7■□□□□ 0.26
CPNE6-210ENST00000558995 FLT4P35916 1363 aa16.69■□□□□ 0.26
CPNE6-210ENST00000558995 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
CPNE6-210ENST00000558995 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
CPNE6-210ENST00000558995 MCM4P33991 863 aa16.68■□□□□ 0.26
CPNE6-210ENST00000558995 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
CPNE6-210ENST00000558995 DLG5Q8TDM6 1919 aa16.68■□□□□ 0.26
CPNE6-210ENST00000558995 RRP9O43818 475 aaKnown RBP16.68■□□□□ 0.26
CPNE6-210ENST00000558995 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
CPNE6-210ENST00000558995 CHL1O00533 1208 aa16.67■□□□□ 0.26
CPNE6-210ENST00000558995 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
CPNE6-210ENST00000558995 MCM10Q7L590 875 aa16.67■□□□□ 0.26
CPNE6-210ENST00000558995 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
CPNE6-210ENST00000558995 EYA1Q99502 592 aa16.66■□□□□ 0.26
CPNE6-210ENST00000558995 FOXO3O43524 673 aa16.66■□□□□ 0.26
CPNE6-210ENST00000558995 ORAI2Q96SN7 254 aa16.66■□□□□ 0.26
CPNE6-210ENST00000558995 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
CPNE6-210ENST00000558995 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
CPNE6-210ENST00000558995 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
CPNE6-210ENST00000558995 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
CPNE6-210ENST00000558995 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
CPNE6-210ENST00000558995 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
CPNE6-210ENST00000558995 HOXC9P31274 260 aa16.64■□□□□ 0.25
CPNE6-210ENST00000558995 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
CPNE6-210ENST00000558995 DDIT3P35638 169 aa16.64■□□□□ 0.25
CPNE6-210ENST00000558995 PSME1Q06323 249 aa16.64■□□□□ 0.25
CPNE6-210ENST00000558995 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
CPNE6-210ENST00000558995 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
CPNE6-210ENST00000558995 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
CPNE6-210ENST00000558995 KIF2CQ99661 725 aa16.63■□□□□ 0.25
CPNE6-210ENST00000558995 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
CPNE6-210ENST00000558995 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
CPNE6-210ENST00000558995 CDC45O75419 566 aa16.62■□□□□ 0.25
CPNE6-210ENST00000558995 PTPRCP08575 1304 aa16.62■□□□□ 0.25
CPNE6-210ENST00000558995 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
CPNE6-210ENST00000558995 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
CPNE6-210ENST00000558995 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
CPNE6-210ENST00000558995 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
CPNE6-210ENST00000558995 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
CPNE6-210ENST00000558995 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
CPNE6-210ENST00000558995 RGS12O14924 1447 aa16.61■□□□□ 0.25
CPNE6-210ENST00000558995 KDRP35968 1356 aa16.61■□□□□ 0.25
CPNE6-210ENST00000558995 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
CPNE6-210ENST00000558995 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
CPNE6-210ENST00000558995 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
CPNE6-210ENST00000558995 CRB1P82279 1406 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 GSPT1P15170 499 aaKnown RBP16.59■□□□□ 0.25
CPNE6-210ENST00000558995 ATP10DQ9P241 1426 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 TRAK2O60296 914 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
CPNE6-210ENST00000558995 CEP85Q6P2H3 762 aa16.58■□□□□ 0.25
CPNE6-210ENST00000558995 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
CPNE6-210ENST00000558995 PRDM4Q9UKN5 801 aa16.57■□□□□ 0.24
CPNE6-210ENST00000558995 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
CPNE6-210ENST00000558995 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
CPNE6-210ENST00000558995 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
CPNE6-210ENST00000558995 HSPA2P54652 639 aa16.56■□□□□ 0.24
CPNE6-210ENST00000558995 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
CPNE6-210ENST00000558995 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
CPNE6-210ENST00000558995 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
CPNE6-210ENST00000558995 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms