RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 GAS2L2Q8NHY3 880 aa14.89□□□□□ -0.03
SEC11A-206ENST00000558924 NUCB1Q02818 461 aa14.88□□□□□ -0.03
SEC11A-206ENST00000558924 HDAC1Q13547 482 aaPredicted RBP14.88□□□□□ -0.03
SEC11A-206ENST00000558924 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
SEC11A-206ENST00000558924 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
SEC11A-206ENST00000558924 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
SEC11A-206ENST00000558924 MTHFSDQ2M296 383 aaKnown RBP14.88□□□□□ -0.03
SEC11A-206ENST00000558924 SMC5Q8IY18 1101 aa14.88□□□□□ -0.03
SEC11A-206ENST00000558924 NEO1Q92859 1461 aa14.88□□□□□ -0.03
SEC11A-206ENST00000558924 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
SEC11A-206ENST00000558924 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
SEC11A-206ENST00000558924 PSME1Q06323 249 aa14.87□□□□□ -0.03
SEC11A-206ENST00000558924 NLRP1Q9C000 1473 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 PDE4CQ08493 712 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 PUS7Q96PZ0 661 aaKnown RBP14.86□□□□□ -0.03
SEC11A-206ENST00000558924 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 MAP3K19Q56UN5 1328 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 FAM177BA6PVY3 158 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 PKP1Q13835 747 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
SEC11A-206ENST00000558924 UQCRHLA0A096LP55 91 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 K7ELQ4 463 aaPredicted RBP14.85□□□□□ -0.03
SEC11A-206ENST00000558924 UQCRHP07919 91 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 SIRT2Q8IXJ6 389 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 TNRQ92752 1358 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
SEC11A-206ENST00000558924 NEXMIFQ5QGS0 1516 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
SEC11A-206ENST00000558924 IL16Q14005 1332 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 A0A0G2JS52 829 aa14.85□□□□□ -0.03
SEC11A-206ENST00000558924 AIMP1Q12904 312 aaKnown RBP14.85□□□□□ -0.03
SEC11A-206ENST00000558924 IGSF3O75054 1194 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 DIP2CQ9Y2E4 1556 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
SEC11A-206ENST00000558924 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 EYA1Q99502 592 aa14.84□□□□□ -0.03
SEC11A-206ENST00000558924 KCNA6P17658 529 aa14.83□□□□□ -0.04
SEC11A-206ENST00000558924 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
SEC11A-206ENST00000558924 CDC45O75419 566 aa14.83□□□□□ -0.04
SEC11A-206ENST00000558924 OFD1O75665 1012 aa14.83□□□□□ -0.04
SEC11A-206ENST00000558924 ANO2Q9NQ90 1003 aa14.83□□□□□ -0.04
SEC11A-206ENST00000558924 ZSCAN30Q86W11 494 aa14.83□□□□□ -0.04
SEC11A-206ENST00000558924 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.04
SEC11A-206ENST00000558924 SYCE3A1L190 88 aa14.82□□□□□ -0.04
SEC11A-206ENST00000558924 PTPRMP28827 1452 aa14.82□□□□□ -0.04
SEC11A-206ENST00000558924 HMMRO75330 724 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 NEK4P51957 841 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 PIK3C2BO00750 1634 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 SIGLEC1Q9BZZ2 1709 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 TEFQ10587 303 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
SEC11A-206ENST00000558924 PPLO60437 1756 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 MYO5BQ9ULV0 1848 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 LMTK2Q8IWU2 1503 aa14.81□□□□□ -0.04
SEC11A-206ENST00000558924 NUTM1Q86Y26 1132 aa14.8□□□□□ -0.04
SEC11A-206ENST00000558924 ZNF330Q9Y3S2 320 aaPredicted RBP14.8□□□□□ -0.04
SEC11A-206ENST00000558924 ALKQ9UM73 1620 aa14.8□□□□□ -0.04
SEC11A-206ENST00000558924 ZC3H6P61129 1189 aaKnown RBP14.8□□□□□ -0.04
SEC11A-206ENST00000558924 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
SEC11A-206ENST00000558924 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
SEC11A-206ENST00000558924 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
SEC11A-206ENST00000558924 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
SEC11A-206ENST00000558924 SURF6O75683 361 aaKnown RBP14.79□□□□□ -0.04
SEC11A-206ENST00000558924 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
SEC11A-206ENST00000558924 VGLL3A8MV65 326 aa14.79□□□□□ -0.04
SEC11A-206ENST00000558924 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
SEC11A-206ENST00000558924 SETBP1Q9Y6X0 1596 aa14.79□□□□□ -0.04
SEC11A-206ENST00000558924 CBX1P83916 185 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 BMP2KLQ5H9B9 411 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 IQSEC2Q5JU85 1478 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
SEC11A-206ENST00000558924 THEMISQ8N1K5 641 aaPredicted RBP14.78□□□□□ -0.04
SEC11A-206ENST00000558924 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
SEC11A-206ENST00000558924 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
SEC11A-206ENST00000558924 KIAA1210Q9ULL0 1709 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 SDSP20132 328 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
SEC11A-206ENST00000558924 MSH6P52701 1360 aa14.77□□□□□ -0.04
SEC11A-206ENST00000558924 ST18O60284 1047 aa14.77□□□□□ -0.04
SEC11A-206ENST00000558924 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.04
SEC11A-206ENST00000558924 GSPT1P15170 499 aaKnown RBP14.77□□□□□ -0.05
SEC11A-206ENST00000558924 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
SEC11A-206ENST00000558924 FLIIQ13045 1269 aa14.77□□□□□ -0.05
SEC11A-206ENST00000558924 LRRC7Q96NW7 1537 aa14.77□□□□□ -0.05
SEC11A-206ENST00000558924 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
SEC11A-206ENST00000558924 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
SEC11A-206ENST00000558924 PRIM1P49642 420 aaKnown RBP14.76□□□□□ -0.05
SEC11A-206ENST00000558924 CEP85Q6P2H3 762 aa14.76□□□□□ -0.05
SEC11A-206ENST00000558924 GNAT3A8MTJ3 354 aa14.76□□□□□ -0.05
SEC11A-206ENST00000558924 ZBTB22O15209 634 aa14.76□□□□□ -0.05
SEC11A-206ENST00000558924 GNAI2P04899 355 aa14.76□□□□□ -0.05
SEC11A-206ENST00000558924 INTS3Q68E01 1043 aaKnown RBP14.76□□□□□ -0.05
SEC11A-206ENST00000558924 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.76□□□□□ -0.05
SEC11A-206ENST00000558924 ZC3H13Q5T200 1668 aaKnown RBP14.75□□□□□ -0.05
SEC11A-206ENST00000558924 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms