RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
LRRC28-207ENST00000558500 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
LRRC28-207ENST00000558500 ADCY9O60503 1353 aa9.8□□□□□ -0.84
LRRC28-207ENST00000558500 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-207ENST00000558500 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
LRRC28-207ENST00000558500 NFAT5O94916 1531 aa9.79□□□□□ -0.84
LRRC28-207ENST00000558500 KCNQ4P56696 695 aa9.79□□□□□ -0.84
LRRC28-207ENST00000558500 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
LRRC28-207ENST00000558500 EVC2Q86UK5 1308 aa9.78□□□□□ -0.84
LRRC28-207ENST00000558500 COL24A1Q17RW2 1714 aa9.77□□□□□ -0.85
LRRC28-207ENST00000558500 MKRN4PQ13434 485 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-207ENST00000558500 ANKRD24Q8TF21 1146 aa9.77□□□□□ -0.85
LRRC28-207ENST00000558500 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-207ENST00000558500 CD2APQ9Y5K6 639 aa9.77□□□□□ -0.85
LRRC28-207ENST00000558500 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-207ENST00000558500 DDX54Q8TDD1 881 aaKnown RBP9.76□□□□□ -0.85
LRRC28-207ENST00000558500 BTAF1O14981 1849 aa9.76□□□□□ -0.85
LRRC28-207ENST00000558500 QRICH2Q9H0J4 1663 aa9.76□□□□□ -0.85
LRRC28-207ENST00000558500 KIAA1210Q9ULL0 1709 aa9.76□□□□□ -0.85
LRRC28-207ENST00000558500 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
LRRC28-207ENST00000558500 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
LRRC28-207ENST00000558500 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
LRRC28-207ENST00000558500 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
LRRC28-207ENST00000558500 SYTL4Q96C24 671 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-207ENST00000558500 CCNL1Q9UK58 526 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-207ENST00000558500 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
LRRC28-207ENST00000558500 QSER1Q2KHR3 1735 aa9.74□□□□□ -0.85
LRRC28-207ENST00000558500 KIF3CO14782 793 aa9.74□□□□□ -0.85
LRRC28-207ENST00000558500 APLP1P51693 650 aa9.74□□□□□ -0.85
LRRC28-207ENST00000558500 NSD2O96028 1365 aa9.74□□□□□ -0.85
LRRC28-207ENST00000558500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
LRRC28-207ENST00000558500 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
LRRC28-207ENST00000558500 NME9Q86XW9 330 aa9.72□□□□□ -0.85
LRRC28-207ENST00000558500 RGPD5Q99666 1765 aa9.72□□□□□ -0.85
LRRC28-207ENST00000558500 FLAD1Q8NFF5 587 aa9.71□□□□□ -0.86
LRRC28-207ENST00000558500 IP6K1Q92551 441 aa9.7□□□□□ -0.86
LRRC28-207ENST00000558500 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
LRRC28-207ENST00000558500 USP47Q96K76 1375 aa9.7□□□□□ -0.86
LRRC28-207ENST00000558500 SBNO2Q9Y2G9 1366 aa9.7□□□□□ -0.86
LRRC28-207ENST00000558500 TOMM70O94826 608 aa9.69□□□□□ -0.86
LRRC28-207ENST00000558500 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
LRRC28-207ENST00000558500 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-207ENST00000558500 WWC3Q9ULE0 1092 aa9.69□□□□□ -0.86
LRRC28-207ENST00000558500 TUBGCP6Q96RT7 1819 aa9.68□□□□□ -0.86
LRRC28-207ENST00000558500 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
LRRC28-207ENST00000558500 COL13A1Q5TAT6 717 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-207ENST00000558500 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
LRRC28-207ENST00000558500 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
LRRC28-207ENST00000558500 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
LRRC28-207ENST00000558500 SPDYE2Q495Y8 402 aa9.67□□□□□ -0.86
LRRC28-207ENST00000558500 LY75O60449 1722 aa9.66□□□□□ -0.86
LRRC28-207ENST00000558500 HDGFL2Q7Z4V5 671 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-207ENST00000558500 JMYQ8N9B5 988 aa9.66□□□□□ -0.86
LRRC28-207ENST00000558500 USP54Q70EL1 1684 aa9.66□□□□□ -0.86
LRRC28-207ENST00000558500 MEGF6O75095 1541 aa9.66□□□□□ -0.86
LRRC28-207ENST00000558500 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
LRRC28-207ENST00000558500 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
LRRC28-207ENST00000558500 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
LRRC28-207ENST00000558500 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
LRRC28-207ENST00000558500 AK7Q96M32 723 aa9.65□□□□□ -0.86
LRRC28-207ENST00000558500 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.87
LRRC28-207ENST00000558500 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
LRRC28-207ENST00000558500 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 HOXC9P31274 260 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 PRELPP51888 382 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 TNS4Q8IZW8 715 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 RBM46Q8TBY0 533 aaKnown RBP9.64□□□□□ -0.87
LRRC28-207ENST00000558500 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 NMRK2Q9NPI5 230 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 DOT1LQ8TEK3 1739 aa9.64□□□□□ -0.87
LRRC28-207ENST00000558500 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-207ENST00000558500 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
LRRC28-207ENST00000558500 PHF14O94880 888 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 HTRA3P83110 453 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 SMIM5Q71RC9 77 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 SLC12A5Q9H2X9 1139 aa9.63□□□□□ -0.87
LRRC28-207ENST00000558500 SSFA2P28290 1259 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 AMPHP49418 695 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 NBPF6Q5VWK0 638 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-207ENST00000558500 NBPF4Q96M43 638 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 KAT6BQ8WYB5 2073 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 A0A1W2PP64 1363 aa9.62□□□□□ -0.87
LRRC28-207ENST00000558500 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
LRRC28-207ENST00000558500 LTN1O94822 1766 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-207ENST00000558500 FBLN1P23142 703 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 FSTL1Q12841 308 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 USHBP1Q8N6Y0 703 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 RAPGEF4Q8WZA2 1011 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 COG3Q96JB2 828 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
LRRC28-207ENST00000558500 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
LRRC28-207ENST00000558500 PCDH11XQ9BZA7 1347 aa9.6□□□□□ -0.87
LRRC28-207ENST00000558500 PCDH11YQ9BZA8 1340 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms