RNA–Protein interactions for RNA: ENST00000557856.5

NTRK3-208, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK3, Length 2,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-208ENST00000557856 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
NTRK3-208ENST00000557856 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
NTRK3-208ENST00000557856 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.45
NTRK3-208ENST00000557856 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
NTRK3-208ENST00000557856 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
NTRK3-208ENST00000557856 ZNF445P59923 1031 aa12.21□□□□□ -0.45
NTRK3-208ENST00000557856 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
NTRK3-208ENST00000557856 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.46
NTRK3-208ENST00000557856 KIF2CQ99661 725 aa12.21□□□□□ -0.46
NTRK3-208ENST00000557856 TMEM51Q9NW97 253 aa12.21□□□□□ -0.46
NTRK3-208ENST00000557856 ADGRB2O60241 1585 aa12.2□□□□□ -0.46
NTRK3-208ENST00000557856 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
NTRK3-208ENST00000557856 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
NTRK3-208ENST00000557856 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
NTRK3-208ENST00000557856 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
NTRK3-208ENST00000557856 CEP170BQ9Y4F5 1589 aaPredicted RBP12.19□□□□□ -0.46
NTRK3-208ENST00000557856 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 ZKSCAN5Q9Y2L8 839 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
NTRK3-208ENST00000557856 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 SASS6Q6UVJ0 657 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 GAS2L2Q8NHY3 880 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
NTRK3-208ENST00000557856 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
NTRK3-208ENST00000557856 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
NTRK3-208ENST00000557856 IPO4Q8TEX9 1081 aaKnown RBP12.18□□□□□ -0.46
NTRK3-208ENST00000557856 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
NTRK3-208ENST00000557856 MON2Q7Z3U7 1717 aa12.18□□□□□ -0.46
NTRK3-208ENST00000557856 KIF20AO95235 890 aa12.18□□□□□ -0.46
NTRK3-208ENST00000557856 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
NTRK3-208ENST00000557856 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
NTRK3-208ENST00000557856 MCM5P33992 734 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
NTRK3-208ENST00000557856 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 ADAMTSL3P82987 1691 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 ACEP12821 1306 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 AKAP12Q02952 1782 aa12.17□□□□□ -0.46
NTRK3-208ENST00000557856 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
NTRK3-208ENST00000557856 ITSN1Q15811 1721 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 NUCB1Q02818 461 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 GTPBP4Q9BZE4 634 aaKnown RBP12.16□□□□□ -0.46
NTRK3-208ENST00000557856 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 TRIM27P14373 513 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
NTRK3-208ENST00000557856 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
NTRK3-208ENST00000557856 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 NGDNQ8NEJ9 315 aaKnown RBP12.15□□□□□ -0.46
NTRK3-208ENST00000557856 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 PTCH1Q13635 1447 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 VGLL3A8MV65 326 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
NTRK3-208ENST00000557856 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
NTRK3-208ENST00000557856 COG3Q96JB2 828 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
NTRK3-208ENST00000557856 FCHSD2O94868 740 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 LETM1O95202 739 aaPredicted RBP12.14□□□□□ -0.47
NTRK3-208ENST00000557856 CBX1P83916 185 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 SETD1BQ9UPS6 1966 aaKnown RBP12.14□□□□□ -0.47
NTRK3-208ENST00000557856 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
NTRK3-208ENST00000557856 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
NTRK3-208ENST00000557856 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 ZNF830Q96NB3 372 aaPredicted RBP12.13□□□□□ -0.47
NTRK3-208ENST00000557856 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 NUCB2P80303 420 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 ZBTB40Q9NUA8 1239 aa12.13□□□□□ -0.47
NTRK3-208ENST00000557856 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
NTRK3-208ENST00000557856 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
NTRK3-208ENST00000557856 PRPF40AO75400 957 aaKnown RBP12.12□□□□□ -0.47
NTRK3-208ENST00000557856 CT47B1P0C2W7 299 aaPredicted RBP12.12□□□□□ -0.47
NTRK3-208ENST00000557856 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
NTRK3-208ENST00000557856 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
NTRK3-208ENST00000557856 TSC1Q92574 1164 aa12.12□□□□□ -0.47
NTRK3-208ENST00000557856 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
NTRK3-208ENST00000557856 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
NTRK3-208ENST00000557856 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
NTRK3-208ENST00000557856 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 IL16Q14005 1332 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 HMOX1P09601 288 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 NRKQ7Z2Y5 1582 aa12.11□□□□□ -0.47
NTRK3-208ENST00000557856 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 DNTTIP2Q5QJE6 756 aaKnown RBP12.1□□□□□ -0.47
NTRK3-208ENST00000557856 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 LRSAM1Q6UWE0 723 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 TTC21BQ7Z4L5 1316 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 IL13P35225 146 aa12.1□□□□□ -0.47
NTRK3-208ENST00000557856 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms