RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
SYNE2-225ENST00000557060 TMEM94Q12767 1356 aa7.51□□□□□ -1.21
SYNE2-225ENST00000557060 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
SYNE2-225ENST00000557060 C19orf44Q9H6X5 657 aa7.51□□□□□ -1.21
SYNE2-225ENST00000557060 AXIN2Q9Y2T1 843 aa7.51□□□□□ -1.21
SYNE2-225ENST00000557060 NOP58Q9Y2X3 529 aaKnown RBP7.51□□□□□ -1.21
SYNE2-225ENST00000557060 SSH2Q76I76 1423 aa7.51□□□□□ -1.21
SYNE2-225ENST00000557060 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-225ENST00000557060 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 NLRP2Q9NX02 1062 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 USP31Q70CQ4 1352 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 GNAT3A8MTJ3 354 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 SEC24BO95487 1268 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 CT47B1P0C2W7 299 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-225ENST00000557060 ZNF853P0CG23 659 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 MS4A1P11836 297 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 FAM161AQ3B820 660 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 G2E3Q7L622 706 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 IPO9Q96P70 1041 aaKnown RBP7.5□□□□□ -1.21
SYNE2-225ENST00000557060 ANP32EQ9BTT0 268 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 ANXA1P04083 346 aa7.5□□□□□ -1.21
SYNE2-225ENST00000557060 AKAP12Q02952 1782 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 PEAK1Q9H792 1746 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ADGRL3Q9HAR2 1447 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 CHL1O00533 1208 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 C8orf34Q49A92 452 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ANKRD45Q5TZF3 282 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 IL17REQ8NFR9 667 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 GAS2L2Q8NHY3 880 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 USP35Q9P2H5 1018 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-225ENST00000557060 IGSF1Q8N6C5 1336 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ALDH1L2Q3SY69 923 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ZNF530Q6P9A1 599 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ANKRD24Q8TF21 1146 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
SYNE2-225ENST00000557060 FKBP5Q13451 457 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-225ENST00000557060 KCNQ3O43525 872 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 KCNH5Q8NCM2 988 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 IP6K1Q92551 441 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 ZNF335Q9H4Z2 1342 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-225ENST00000557060 ANKARQ7Z5J8 1434 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 XRN1Q8IZH2 1706 aaKnown RBP7.48□□□□□ -1.21
SYNE2-225ENST00000557060 TEFQ10587 303 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 STK31Q9BXU1 1019 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 PIK3C2AO00443 1686 aa7.48□□□□□ -1.21
SYNE2-225ENST00000557060 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
SYNE2-225ENST00000557060 ZBTB7BO15156 539 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-225ENST00000557060 ADAMTSL3P82987 1691 aa7.47□□□□□ -1.21
SYNE2-225ENST00000557060 TOPAZ1Q8N9V7 1692 aa7.47□□□□□ -1.21
SYNE2-225ENST00000557060 C1orf141Q5JVX7 400 aa7.46□□□□□ -1.21
SYNE2-225ENST00000557060 MEIS3Q99687 375 aa7.46□□□□□ -1.21
SYNE2-225ENST00000557060 ARHGEF10O15013 1369 aa7.46□□□□□ -1.21
SYNE2-225ENST00000557060 KDM4FA0A1W2PPD8 638 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 MFAP1P55081 439 aaKnown RBP7.46□□□□□ -1.22
SYNE2-225ENST00000557060 API5Q9BZZ5 524 aaKnown RBP7.46□□□□□ -1.22
SYNE2-225ENST00000557060 NRKQ7Z2Y5 1582 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 HDGFL1Q5TGJ6 251 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 ARHGEF25Q86VW2 580 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 SPRYD3Q8NCJ5 442 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.22
SYNE2-225ENST00000557060 PIP4K2AP48426 406 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-225ENST00000557060 TAF7Q15545 349 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-225ENST00000557060 PHAXQ9H814 394 aaKnown RBP7.45□□□□□ -1.22
SYNE2-225ENST00000557060 PRAMEF22A3QJZ6 481 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 BTBD11A6QL63 1104 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 SLC39A6Q13433 755 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 CADPS2Q86UW7 1296 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 SIRT2Q8IXJ6 389 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 MAP3K5Q99683 1374 aa7.45□□□□□ -1.22
SYNE2-225ENST00000557060 SMARCA5O60264 1052 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-225ENST00000557060 RAPGEF4Q8WZA2 1011 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 CHD2O14647 1828 aaKnown RBP7.44□□□□□ -1.22
SYNE2-225ENST00000557060 C1orf167Q5SNV9 1468 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 A0A0G2JS52 829 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
SYNE2-225ENST00000557060 CRB1P82279 1406 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 KDRP35968 1356 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 MSH6P52701 1360 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 FMN2Q9NZ56 1722 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 FLIIQ13045 1269 aa7.44□□□□□ -1.22
SYNE2-225ENST00000557060 PLEKHO1Q53GL0 409 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-225ENST00000557060 C16orf71Q8IYS4 520 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-225ENST00000557060 CHD1LQ86WJ1 897 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 ABCC4O15439 1325 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 HDAC1Q13547 482 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-225ENST00000557060 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 TSHZ3Q63HK5 1081 aa7.43□□□□□ -1.22
SYNE2-225ENST00000557060 UPF2Q9HAU5 1272 aaKnown RBP7.43□□□□□ -1.22
SYNE2-225ENST00000557060 OTUD7AQ8TE49 926 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-225ENST00000557060 ARHGAP45Q92619 1136 aa7.42□□□□□ -1.22
SYNE2-225ENST00000557060 EXOC6BQ9Y2D4 811 aa7.42□□□□□ -1.22
SYNE2-225ENST00000557060 USP19O94966 1318 aa7.42□□□□□ -1.22
SYNE2-225ENST00000557060 NPHP3Q7Z494 1330 aa7.42□□□□□ -1.22
SYNE2-225ENST00000557060 BRINP3Q76B58 766 aa7.42□□□□□ -1.22
SYNE2-225ENST00000557060 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms