RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
LRP1-211ENST00000556356 GCP02774 474 aa18.47■□□□□ 0.55
LRP1-211ENST00000556356 DDB1Q16531 1140 aa18.47■□□□□ 0.55
LRP1-211ENST00000556356 L1TD1Q5T7N2 865 aaKnown RBP18.47■□□□□ 0.55
LRP1-211ENST00000556356 FLT4P35916 1363 aa18.47■□□□□ 0.55
LRP1-211ENST00000556356 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
LRP1-211ENST00000556356 PSMA5P28066 241 aa18.46■□□□□ 0.55
LRP1-211ENST00000556356 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
LRP1-211ENST00000556356 SART3Q15020 963 aaKnown RBP18.45■□□□□ 0.54
LRP1-211ENST00000556356 ZRANB1Q9UGI0 708 aa18.45■□□□□ 0.54
LRP1-211ENST00000556356 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
LRP1-211ENST00000556356 MLH3Q9UHC1 1453 aa18.45■□□□□ 0.54
LRP1-211ENST00000556356 IL2RBP14784 551 aa18.45■□□□□ 0.54
LRP1-211ENST00000556356 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
LRP1-211ENST00000556356 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
LRP1-211ENST00000556356 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
LRP1-211ENST00000556356 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
LRP1-211ENST00000556356 AACSQ86V21 672 aa18.44■□□□□ 0.54
LRP1-211ENST00000556356 TESK2Q96S53 571 aa18.44■□□□□ 0.54
LRP1-211ENST00000556356 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
LRP1-211ENST00000556356 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
LRP1-211ENST00000556356 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
LRP1-211ENST00000556356 TRMT112Q9UI30 125 aaKnown RBP18.44■□□□□ 0.54
LRP1-211ENST00000556356 A0A087WZG4 1122 aa18.43■□□□□ 0.54
LRP1-211ENST00000556356 TMEM57Q8N5G2 664 aa18.43■□□□□ 0.54
LRP1-211ENST00000556356 TSPOAP1O95153 1857 aa18.43■□□□□ 0.54
LRP1-211ENST00000556356 EIF4A2Q14240 407 aaKnown RBP18.43■□□□□ 0.54
LRP1-211ENST00000556356 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
LRP1-211ENST00000556356 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
LRP1-211ENST00000556356 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
LRP1-211ENST00000556356 ADGBQ8N7X0 1667 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 NACAP1Q9BZK3 213 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 GZF1Q9H116 711 aaPredicted RBP18.42■□□□□ 0.54
LRP1-211ENST00000556356 DNAJC5Q9H3Z4 198 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
LRP1-211ENST00000556356 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 LTKP29376 864 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 CHAF1AQ13111 956 aaPredicted RBP18.41■□□□□ 0.54
LRP1-211ENST00000556356 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
LRP1-211ENST00000556356 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
LRP1-211ENST00000556356 ERCC6L2Q5T890 1561 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 GLIPR1L2Q4G1C9 344 aa18.41■□□□□ 0.54
LRP1-211ENST00000556356 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.543e-6■□□□□ 9.3
LRP1-211ENST00000556356 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 IL16Q14005 1332 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 FKBP4Q02790 459 aaKnown RBP eCLIP18.4■□□□□ 0.54
LRP1-211ENST00000556356 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
LRP1-211ENST00000556356 SLAIN2Q9P270 581 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 AKAP2Q9Y2D5 859 aa18.4■□□□□ 0.54
LRP1-211ENST00000556356 PHF14O94880 888 aa18.39■□□□□ 0.54
LRP1-211ENST00000556356 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.54
LRP1-211ENST00000556356 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.54
LRP1-211ENST00000556356 FLIIQ13045 1269 aa18.39■□□□□ 0.53
LRP1-211ENST00000556356 IP6K1Q92551 441 aa18.39■□□□□ 0.53
LRP1-211ENST00000556356 RFC4P35249 363 aa18.39■□□□□ 0.53
LRP1-211ENST00000556356 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
LRP1-211ENST00000556356 PTPRCP08575 1304 aa18.39■□□□□ 0.53
LRP1-211ENST00000556356 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
LRP1-211ENST00000556356 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
LRP1-211ENST00000556356 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
LRP1-211ENST00000556356 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
LRP1-211ENST00000556356 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
LRP1-211ENST00000556356 IFIT1P09914 478 aaKnown RBP18.37■□□□□ 0.53
LRP1-211ENST00000556356 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 GPTP24298 496 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 KIAA2012Q0VF49 1180 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 RRP12Q5JTH9 1297 aaKnown RBP18.37■□□□□ 0.53
LRP1-211ENST00000556356 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 F6X3S4 739 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 HOXC9P31274 260 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 SIRT1Q96EB6 747 aa18.37■□□□□ 0.53
LRP1-211ENST00000556356 HECW2Q9P2P5 1572 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 XBP1P17861 261 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
LRP1-211ENST00000556356 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
LRP1-211ENST00000556356 CHD1LQ86WJ1 897 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 KIF1BPQ96EK5 621 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 PIK3R4Q99570 1358 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 CAVIN4Q5BKX8 364 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 CDCA7Q9BWT1 371 aaPredicted RBP18.36■□□□□ 0.53
LRP1-211ENST00000556356 BRMS1Q9HCU9 246 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
LRP1-211ENST00000556356 ARHGEF10O15013 1369 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 ANKRD18BA2A2Z9 1011 aa18.35■□□□□ 0.53
LRP1-211ENST00000556356 CREBRFQ8IUR6 639 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms