RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 FAM83GA6ND36 823 aa29.98■■■□□ 2.39
STRN3-207ENST00000555358 IGSF1Q8N6C5 1336 aa29.98■■■□□ 2.39
STRN3-207ENST00000555358 EXOSC9Q06265 439 aaKnown RBP29.98■■■□□ 2.39
STRN3-207ENST00000555358 KCNH5Q8NCM2 988 aa29.98■■■□□ 2.39
STRN3-207ENST00000555358 DZIP1LQ8IYY4 767 aaKnown RBP29.97■■■□□ 2.39
STRN3-207ENST00000555358 GCP02774 474 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 SLIT3O75094 1523 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 ALS2Q96Q42 1657 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 ANTXR1Q9H6X2 564 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 UPF2Q9HAU5 1272 aaKnown RBP29.96■■■□□ 2.39
STRN3-207ENST00000555358 RTL1A6NKG5 1358 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 KDRP35968 1356 aa29.96■■■□□ 2.39
STRN3-207ENST00000555358 DCTN1Q14203 1278 aa29.95■■■□□ 2.39
STRN3-207ENST00000555358 IP6K1Q92551 441 aa29.95■■■□□ 2.38
STRN3-207ENST00000555358 FTSJ3Q8IY81 847 aaKnown RBP29.93■■■□□ 2.38
STRN3-207ENST00000555358 SLKQ9H2G2 1235 aaPredicted RBP29.92■■■□□ 2.38
STRN3-207ENST00000555358 LMOD3Q0VAK6 560 aa29.91■■■□□ 2.38
STRN3-207ENST00000555358 PHRF1Q9P1Y6 1649 aaKnown RBP29.9■■■□□ 2.38
STRN3-207ENST00000555358 TBC1D2Q9BYX2 928 aa29.9■■■□□ 2.38
STRN3-207ENST00000555358 TRIM27P14373 513 aa29.9■■■□□ 2.38
STRN3-207ENST00000555358 SMC4Q9NTJ3 1288 aa29.9■■■□□ 2.38
STRN3-207ENST00000555358 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
STRN3-207ENST00000555358 ARHGEF25Q86VW2 580 aa29.89■■■□□ 2.38
STRN3-207ENST00000555358 MED1Q15648 1581 aaPredicted RBP29.88■■■□□ 2.37
STRN3-207ENST00000555358 MTHFSDQ2M296 383 aaKnown RBP29.88■■■□□ 2.37
STRN3-207ENST00000555358 USHBP1Q8N6Y0 703 aa29.88■■■□□ 2.37
STRN3-207ENST00000555358 SSH1Q8WYL5 1049 aa29.88■■■□□ 2.37
STRN3-207ENST00000555358 CALD1Q05682 793 aaKnown RBP29.87■■■□□ 2.37
STRN3-207ENST00000555358 HDAC1Q13547 482 aaPredicted RBP29.87■■■□□ 2.37
STRN3-207ENST00000555358 BRINP3Q76B58 766 aa29.87■■■□□ 2.37
STRN3-207ENST00000555358 RGPD2P0DJD1 1756 aa29.87■■■□□ 2.37
STRN3-207ENST00000555358 ZNF853P0CG23 659 aa29.86■■■□□ 2.37
STRN3-207ENST00000555358 IFT57Q9NWB7 429 aa29.86■■■□□ 2.37
STRN3-207ENST00000555358 PXDNQ92626 1479 aa29.86■■■□□ 2.37
STRN3-207ENST00000555358 MCM10Q7L590 875 aa29.85■■■□□ 2.37
STRN3-207ENST00000555358 GNAI1P63096 354 aa29.84■■■□□ 2.37
STRN3-207ENST00000555358 MBIPQ9NS73 344 aa29.84■■■□□ 2.37
STRN3-207ENST00000555358 ATF7IPQ6VMQ6 1270 aa29.84■■■□□ 2.37
STRN3-207ENST00000555358 DDX19BQ9UMR2 479 aa29.84■■■□□ 2.37
STRN3-207ENST00000555358 NBPF6Q5VWK0 638 aa29.83■■■□□ 2.37
STRN3-207ENST00000555358 NBPF4Q96M43 638 aa29.83■■■□□ 2.37
STRN3-207ENST00000555358 ANO8Q9HCE9 1232 aaPredicted RBP29.83■■■□□ 2.37
STRN3-207ENST00000555358 CFAP44Q96MT7 982 aa29.83■■■□□ 2.37
STRN3-207ENST00000555358 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
STRN3-207ENST00000555358 ZC3H6P61129 1189 aaKnown RBP29.81■■■□□ 2.36
STRN3-207ENST00000555358 TNS3Q68CZ2 1445 aa29.81■■■□□ 2.36
STRN3-207ENST00000555358 LRRC59Q96AG4 307 aaKnown RBP29.81■■■□□ 2.36
STRN3-207ENST00000555358 RGPD5Q99666 1765 aa29.81■■■□□ 2.36
STRN3-207ENST00000555358 ITPRIPQ8IWB1 547 aa29.8■■■□□ 2.36
STRN3-207ENST00000555358 CABLES1Q8TDN4 633 aa29.8■■■□□ 2.36
STRN3-207ENST00000555358 NOB1Q9ULX3 412 aaKnown RBP29.8■■■□□ 2.36
STRN3-207ENST00000555358 AXIN2Q9Y2T1 843 aa29.8■■■□□ 2.36
STRN3-207ENST00000555358 SMC5Q8IY18 1101 aa29.79■■■□□ 2.36
STRN3-207ENST00000555358 SPATA31A3Q5VYP0 1347 aa29.78■■■□□ 2.36
STRN3-207ENST00000555358 TSPYL6Q8N831 410 aa29.78■■■□□ 2.36
STRN3-207ENST00000555358 GAS2L2Q8NHY3 880 aa29.77■■■□□ 2.36
STRN3-207ENST00000555358 TMEM57Q8N5G2 664 aa29.76■■■□□ 2.36
STRN3-207ENST00000555358 C22orf23Q9BZE7 217 aa29.76■■■□□ 2.36
STRN3-207ENST00000555358 ZBTB40Q9NUA8 1239 aa29.76■■■□□ 2.35
STRN3-207ENST00000555358 ANKRD24Q8TF21 1146 aa29.75■■■□□ 2.35
STRN3-207ENST00000555358 ELL2O00472 640 aaPredicted RBP29.75■■■□□ 2.35
STRN3-207ENST00000555358 CRYBG1Q9Y4K1 1723 aa29.73■■■□□ 2.35
STRN3-207ENST00000555358 CRB1P82279 1406 aa29.73■■■□□ 2.35
STRN3-207ENST00000555358 VAMP4O75379 141 aa29.73■■■□□ 2.35
STRN3-207ENST00000555358 C8orf58Q8NAV2 365 aa29.73■■■□□ 2.35
STRN3-207ENST00000555358 RTF1Q92541 710 aaKnown RBP29.73■■■□□ 2.35
STRN3-207ENST00000555358 KIF16BQ96L93 1317 aa29.73■■■□□ 2.35
STRN3-207ENST00000555358 MFAP1P55081 439 aaKnown RBP29.72■■■□□ 2.35
STRN3-207ENST00000555358 CHL1O00533 1208 aa29.71■■■□□ 2.35
STRN3-207ENST00000555358 ALDH1L2Q3SY69 923 aa29.69■■■□□ 2.34
STRN3-207ENST00000555358 MIS18AQ9NYP9 233 aa29.69■■■□□ 2.34
STRN3-207ENST00000555358 SOS2Q07890 1332 aaPredicted RBP29.69■■■□□ 2.34
STRN3-207ENST00000555358 GNAT3A8MTJ3 354 aa29.68■■■□□ 2.34
STRN3-207ENST00000555358 IPO8O15397 1037 aaKnown RBP29.68■■■□□ 2.34
STRN3-207ENST00000555358 TWISTNBQ3B726 338 aaPredicted RBP29.68■■■□□ 2.34
STRN3-207ENST00000555358 COL18A1P39060 1754 aa29.67■■■□□ 2.34
STRN3-207ENST00000555358 KRT24Q2M2I5 525 aa29.67■■■□□ 2.34
STRN3-207ENST00000555358 ERBB3P21860 1342 aa29.67■■■□□ 2.34
STRN3-207ENST00000555358 NCAPD2Q15021 1401 aa29.66■■■□□ 2.34
STRN3-207ENST00000555358 MAP3K5Q99683 1374 aa29.66■■■□□ 2.34
STRN3-207ENST00000555358 NUCB1Q02818 461 aa29.65■■■□□ 2.34
STRN3-207ENST00000555358 CHRNA2Q15822 529 aa29.65■■■□□ 2.34
STRN3-207ENST00000555358 SPRYD3Q8NCJ5 442 aa29.65■■■□□ 2.34
STRN3-207ENST00000555358 CAMTA1Q9Y6Y1 1673 aa29.64■■■□□ 2.34
STRN3-207ENST00000555358 HTATSF1O43719 755 aaKnown RBP29.64■■■□□ 2.34
STRN3-207ENST00000555358 ZNF428Q96B54 188 aa29.64■■■□□ 2.34
STRN3-207ENST00000555358 LRRC37A3O60309 1634 aa29.64■■■□□ 2.34
STRN3-207ENST00000555358 IL17REQ8NFR9 667 aa29.64■■■□□ 2.33
STRN3-207ENST00000555358 BRPF1P55201 1214 aaPredicted RBP29.63■■■□□ 2.33
STRN3-207ENST00000555358 FAM43AQ8N2R8 423 aa29.63■■■□□ 2.33
STRN3-207ENST00000555358 MCM4P33991 863 aa29.63■■■□□ 2.33
STRN3-207ENST00000555358 KIAA0232Q92628 1395 aa29.62■■■□□ 2.33
STRN3-207ENST00000555358 CHMP5Q9NZZ3 219 aa29.62■■■□□ 2.33
STRN3-207ENST00000555358 L1TD1Q5T7N2 865 aaKnown RBP29.61■■■□□ 2.33
STRN3-207ENST00000555358 MRPL50Q8N5N7 158 aaKnown RBP29.61■■■□□ 2.33
STRN3-207ENST00000555358 NHSL1Q5SYE7 1610 aa29.6■■■□□ 2.33
STRN3-207ENST00000555358 TSPYL4Q9UJ04 414 aa29.6■■■□□ 2.33
STRN3-207ENST00000555358 LMO7Q8WWI1 1683 aa29.58■■■□□ 2.33
STRN3-207ENST00000555358 RBM25P49756 843 aaKnown RBP29.58■■■□□ 2.33
STRN3-207ENST00000555358 CHD1LQ86WJ1 897 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms