RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 IFFO2Q5TF58 517 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 ERC1Q8IUD2 1116 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 BICD2Q8TD16 824 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 CYP46A1Q9Y6A2 500 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 ASXL2Q76L83 1435 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 SYCE3A1L190 88 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 SMARCA5O60264 1052 aaPredicted RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 CSB-PGBD3P0DP91 1061 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 TAF7Q15545 349 aaPredicted RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 HSP90AB2PQ58FF8 381 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 CCDC34Q96HJ3 373 aa4.68□□□□□ -1.66
KTN1-217ENST00000554831 ZSCAN31Q96LW9 406 aaPredicted RBP4.68□□□□□ -1.66
KTN1-217ENST00000554831 PRDM15P57071 1507 aaPredicted RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 PSME1Q06323 249 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 THEMISQ8N1K5 641 aaPredicted RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 RAB11FIP3O75154 756 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 CHMP3Q9Y3E7 222 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 ZFYVE9O95405 1425 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 CHL1O00533 1208 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 PLEKHO1Q53GL0 409 aaPredicted RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 AEBP1Q8IUX7 1158 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 TMX3Q96JJ7 454 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 MAST1Q9Y2H9 1570 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 GNAT3A8MTJ3 354 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 CCDC192P0DO97 292 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 INTS4Q96HW7 963 aaKnown RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 MIS18AQ9NYP9 233 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.67□□□□□ -1.66
KTN1-217ENST00000554831 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 HSP90B1P14625 803 aaKnown RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 ANKRD1Q15327 319 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 BLOC1S2Q6QNY1 142 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 SASS6Q6UVJ0 657 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 RAPGEF4Q8WZA2 1011 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 USP26Q9BXU7 913 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 PDCL3Q9H2J4 239 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 RRAGDQ9NQL2 400 aaPredicted RBP4.67□□□□□ -1.66
KTN1-217ENST00000554831 LIMCH1Q9UPQ0 1083 aa4.67□□□□□ -1.66
KTN1-217ENST00000554831 CFAP65Q6ZU64 1925 aaKnown RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 NPATQ14207 1427 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 LARP1BQ659C4 914 aaKnown RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 CEP85Q6P2H3 762 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 CCDC73Q6ZRK6 1079 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 ARID3AQ99856 593 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 TPM4P67936 248 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 ZNF530Q6P9A1 599 aaPredicted RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 C16orf71Q8IYS4 520 aaPredicted RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 FSD1Q9BTV5 496 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 SH2B1Q9NRF2 756 aaPredicted RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 NUTM2GQ5VZR2 741 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 RIC3Q7Z5B4 369 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 SDF4Q9BRK5 362 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 SAMD9LQ8IVG5 1584 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 PRKCSHP14314 528 aaPredicted RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 IL13P35225 146 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 GNL2Q13823 731 aaKnown RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 EIF4A2Q14240 407 aaKnown RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 TRIM5Q9C035 493 aa4.66□□□□□ -1.66
KTN1-217ENST00000554831 SCAND2PQ9GZW5 306 aaPredicted RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 LRRFIP2Q9Y608 721 aaKnown RBP4.66□□□□□ -1.66
KTN1-217ENST00000554831 YTHDC2Q9H6S0 1430 aaKnown RBP4.65□□□□□ -1.66
KTN1-217ENST00000554831 ATP7AQ04656 1500 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 ZNF445P59923 1031 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 ATP8B2P98198 1209 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 TTC5Q8N0Z6 440 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 PLEKHF1Q96S99 279 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 ESYT1Q9BSJ8 1104 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 ZKSCAN5Q9Y2L8 839 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 ACEP12821 1306 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 KRT32Q14532 448 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 LRSAM1Q6UWE0 723 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 CWC27Q6UX04 472 aaKnown RBP4.65□□□□□ -1.66
KTN1-217ENST00000554831 ECHDC1Q9NTX5 307 aa4.65□□□□□ -1.66
KTN1-217ENST00000554831 CPLX1O14810 134 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 KRT24Q2M2I5 525 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 DNAAF4Q8WXU2 420 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 DBF4Q9UBU7 674 aaPredicted RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 MYOM2P54296 1465 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 ABCC4O15439 1325 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 EPB41L2O43491 1005 aaKnown RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 PRIM1P49642 420 aaKnown RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 RHPN1Q8TCX5 695 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 JAKMIP1Q96N16 626 aaKnown RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 TRPM2O94759 1503 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 SOS1Q07889 1333 aaPredicted RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 OFD1O75665 1012 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 AIMP1Q12904 312 aaKnown RBP4.65□□□□□ -1.67
KTN1-217ENST00000554831 UVSSAQ2YD98 709 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 ZSCAN23Q3MJ62 389 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 PPP1R42Q7Z4L9 355 aa4.65□□□□□ -1.67
KTN1-217ENST00000554831 SYNMO15061 1565 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 KINO60870 393 aaKnown RBP4.64□□□□□ -1.67
KTN1-217ENST00000554831 CCDC183Q5T5S1 534 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 ZGPATQ8N5A5 531 aaKnown RBP4.64□□□□□ -1.67
KTN1-217ENST00000554831 ZRANB1Q9UGI0 708 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 TTC37Q6PGP7 1564 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 TTC21AQ8NDW8 1320 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 PI4KAP2A4QPH2 592 aa4.64□□□□□ -1.67
KTN1-217ENST00000554831 UBE2HP62256 183 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms