RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
PTCD2P1-201ENST00000554393 EXOC5O00471 708 aa14.42□□□□□ -0.1
PTCD2P1-201ENST00000554393 HOXC9P31274 260 aa14.42□□□□□ -0.1
PTCD2P1-201ENST00000554393 AMPHP49418 695 aa14.42□□□□□ -0.1
PTCD2P1-201ENST00000554393 MARCH10Q8NA82 808 aaPredicted RBP14.42□□□□□ -0.1
PTCD2P1-201ENST00000554393 IL2RBP14784 551 aa14.41□□□□□ -0.1
PTCD2P1-201ENST00000554393 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
PTCD2P1-201ENST00000554393 EZH2Q15910 746 aaKnown RBP14.4□□□□□ -0.1
PTCD2P1-201ENST00000554393 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
PTCD2P1-201ENST00000554393 CGNL1Q0VF96 1302 aa14.4□□□□□ -0.1
PTCD2P1-201ENST00000554393 INSRP06213 1382 aa14.39□□□□□ -0.11
PTCD2P1-201ENST00000554393 FLT4P35916 1363 aa14.39□□□□□ -0.11
PTCD2P1-201ENST00000554393 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
PTCD2P1-201ENST00000554393 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
PTCD2P1-201ENST00000554393 CEP350Q5VT06 3117 aa14.39□□□□□ -0.11
PTCD2P1-201ENST00000554393 PLSCR1O15162 318 aa14.38□□□□□ -0.11
PTCD2P1-201ENST00000554393 FBLN1P23142 703 aa14.38□□□□□ -0.11
PTCD2P1-201ENST00000554393 RRS1Q15050 365 aaKnown RBP14.38□□□□□ -0.11
PTCD2P1-201ENST00000554393 LTV1Q96GA3 475 aaPredicted RBP14.37□□□□□ -0.11
PTCD2P1-201ENST00000554393 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
PTCD2P1-201ENST00000554393 BTAF1O14981 1849 aa14.36□□□□□ -0.11
PTCD2P1-201ENST00000554393 NSD2O96028 1365 aa14.35□□□□□ -0.11
PTCD2P1-201ENST00000554393 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
PTCD2P1-201ENST00000554393 POLR3GLQ9BT43 218 aa14.35□□□□□ -0.11
PTCD2P1-201ENST00000554393 C1QTNF8P60827 252 aa14.34□□□□□ -0.11
PTCD2P1-201ENST00000554393 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
PTCD2P1-201ENST00000554393 MEGF6O75095 1541 aa14.34□□□□□ -0.11
PTCD2P1-201ENST00000554393 NCAPD2Q15021 1401 aa14.33□□□□□ -0.11
PTCD2P1-201ENST00000554393 DOT1LQ8TEK3 1739 aa14.33□□□□□ -0.12
PTCD2P1-201ENST00000554393 NBPF14Q5TI25 921 aa14.33□□□□□ -0.12
PTCD2P1-201ENST00000554393 ZNF784Q8NCA9 323 aaPredicted RBP14.33□□□□□ -0.12
PTCD2P1-201ENST00000554393 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 PANK3Q9H999 370 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
PTCD2P1-201ENST00000554393 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
PTCD2P1-201ENST00000554393 UTRNP46939 3433 aa14.3□□□□□ -0.12
PTCD2P1-201ENST00000554393 ZCRB1Q8TBF4 217 aaKnown RBP14.3□□□□□ -0.12
PTCD2P1-201ENST00000554393 RAPGEF4Q8WZA2 1011 aa14.3□□□□□ -0.12
PTCD2P1-201ENST00000554393 KCNQ2O43526 872 aa14.29□□□□□ -0.12
PTCD2P1-201ENST00000554393 POLKQ9UBT6 870 aa14.29□□□□□ -0.12
PTCD2P1-201ENST00000554393 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
PTCD2P1-201ENST00000554393 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
PTCD2P1-201ENST00000554393 CASZ1Q86V15 1759 aa14.28□□□□□ -0.12
PTCD2P1-201ENST00000554393 DDX54Q8TDD1 881 aaKnown RBP14.28□□□□□ -0.12
PTCD2P1-201ENST00000554393 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
PTCD2P1-201ENST00000554393 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
PTCD2P1-201ENST00000554393 LY75O60449 1722 aa14.27□□□□□ -0.12
PTCD2P1-201ENST00000554393 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
PTCD2P1-201ENST00000554393 TXNRD1Q16881 649 aa14.27□□□□□ -0.13
PTCD2P1-201ENST00000554393 PROM2Q8N271 834 aa14.27□□□□□ -0.13
PTCD2P1-201ENST00000554393 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
PTCD2P1-201ENST00000554393 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
PTCD2P1-201ENST00000554393 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
PTCD2P1-201ENST00000554393 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
PTCD2P1-201ENST00000554393 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
PTCD2P1-201ENST00000554393 QSER1Q2KHR3 1735 aa14.25□□□□□ -0.13
PTCD2P1-201ENST00000554393 ITGB4P16144 1822 aa14.25□□□□□ -0.13
PTCD2P1-201ENST00000554393 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
PTCD2P1-201ENST00000554393 TOGARAM1Q9Y4F4 1720 aa14.24□□□□□ -0.13
PTCD2P1-201ENST00000554393 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
PTCD2P1-201ENST00000554393 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
PTCD2P1-201ENST00000554393 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
PTCD2P1-201ENST00000554393 EYA1Q99502 592 aa14.23□□□□□ -0.13
PTCD2P1-201ENST00000554393 EIF4A2Q14240 407 aaKnown RBP14.22□□□□□ -0.13
PTCD2P1-201ENST00000554393 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
PTCD2P1-201ENST00000554393 STK32BQ9NY57 414 aa14.22□□□□□ -0.13
PTCD2P1-201ENST00000554393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTCD2P1-201ENST00000554393 IGSF1Q8N6C5 1336 aa14.21□□□□□ -0.13
PTCD2P1-201ENST00000554393 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
PTCD2P1-201ENST00000554393 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
PTCD2P1-201ENST00000554393 CYP27B1O15528 508 aa14.2□□□□□ -0.14
PTCD2P1-201ENST00000554393 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
PTCD2P1-201ENST00000554393 SLC15A2Q16348 729 aa14.2□□□□□ -0.14
PTCD2P1-201ENST00000554393 PPP1R1BQ9UD71 204 aaPredicted RBP14.2□□□□□ -0.14
PTCD2P1-201ENST00000554393 SPG7Q9UQ90 795 aa14.2□□□□□ -0.14
PTCD2P1-201ENST00000554393 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
PTCD2P1-201ENST00000554393 SYTL4Q96C24 671 aaPredicted RBP14.19□□□□□ -0.14
PTCD2P1-201ENST00000554393 SPON1Q9HCB6 807 aa14.19□□□□□ -0.14
PTCD2P1-201ENST00000554393 TUBGCP6Q96RT7 1819 aa14.19□□□□□ -0.14
PTCD2P1-201ENST00000554393 C5P01031 1676 aa14.18□□□□□ -0.14
PTCD2P1-201ENST00000554393 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
PTCD2P1-201ENST00000554393 LRRC4BQ9NT99 713 aa14.17□□□□□ -0.14
PTCD2P1-201ENST00000554393 HMGB2P26583 209 aaKnown RBP14.16□□□□□ -0.14
PTCD2P1-201ENST00000554393 KDRP35968 1356 aa14.16□□□□□ -0.14
PTCD2P1-201ENST00000554393 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
PTCD2P1-201ENST00000554393 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
PTCD2P1-201ENST00000554393 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
PTCD2P1-201ENST00000554393 PHKG2P15735 406 aa14.14□□□□□ -0.15
PTCD2P1-201ENST00000554393 PALLDQ8WX93 1383 aa14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 IL13P35225 146 aa14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 ZNF827Q17R98 1081 aa14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 PDGFDQ9GZP0 370 aaPredicted RBP14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 MTFR1LQ9H019 292 aa14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 CCNL1Q9UK58 526 aaPredicted RBP14.13□□□□□ -0.15
PTCD2P1-201ENST00000554393 ZNF831Q5JPB2 1677 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms