RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 NFAT5O94916 1531 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 CACNA1FO60840 1977 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 HOXC9P31274 260 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 AMPHP49418 695 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 NLRP6P59044 892 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 BECN1Q14457 450 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 CHD1LQ86WJ1 897 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-209ENST00000553889 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
PRKCH-209ENST00000553889 LAS1LQ9Y4W2 734 aaKnown RBP11.62□□□□□ -0.55
PRKCH-209ENST00000553889 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
PRKCH-209ENST00000553889 SEC24BO95487 1268 aa11.61□□□□□ -0.55
PRKCH-209ENST00000553889 MTHFSDQ2M296 383 aaKnown RBP11.61□□□□□ -0.55
PRKCH-209ENST00000553889 IP6K1Q92551 441 aa11.61□□□□□ -0.55
PRKCH-209ENST00000553889 CHMP4AQ9BY43 222 aa11.61□□□□□ -0.55
PRKCH-209ENST00000553889 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
PRKCH-209ENST00000553889 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
PRKCH-209ENST00000553889 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
PRKCH-209ENST00000553889 KCNH5Q8NCM2 988 aa11.6□□□□□ -0.55
PRKCH-209ENST00000553889 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
PRKCH-209ENST00000553889 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-209ENST00000553889 SLIT3O75094 1523 aa11.6□□□□□ -0.55
PRKCH-209ENST00000553889 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
PRKCH-209ENST00000553889 MED1Q15648 1581 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-209ENST00000553889 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
PRKCH-209ENST00000553889 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
PRKCH-209ENST00000553889 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
PRKCH-209ENST00000553889 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-209ENST00000553889 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
PRKCH-209ENST00000553889 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
PRKCH-209ENST00000553889 MAP3K5Q99683 1374 aa11.58□□□□□ -0.56
PRKCH-209ENST00000553889 GNAT3A8MTJ3 354 aa11.58□□□□□ -0.56
PRKCH-209ENST00000553889 HOXB7P09629 217 aa11.58□□□□□ -0.56
PRKCH-209ENST00000553889 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
PRKCH-209ENST00000553889 MCM10Q7L590 875 aa11.58□□□□□ -0.56
PRKCH-209ENST00000553889 OVOS2A0A0G2JMS6 1433 aa11.58□□□□□ -0.56
PRKCH-209ENST00000553889 MSH6P52701 1360 aa11.57□□□□□ -0.56
PRKCH-209ENST00000553889 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
PRKCH-209ENST00000553889 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
PRKCH-209ENST00000553889 ABTB2Q8N961 1025 aa11.57□□□□□ -0.56
PRKCH-209ENST00000553889 PXDNLA1KZ92 1463 aa11.57□□□□□ -0.56
PRKCH-209ENST00000553889 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-209ENST00000553889 CAMTA1Q9Y6Y1 1673 aa11.56□□□□□ -0.56
PRKCH-209ENST00000553889 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-209ENST00000553889 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-209ENST00000553889 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
PRKCH-209ENST00000553889 DCCP43146 1447 aa11.55□□□□□ -0.56
PRKCH-209ENST00000553889 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
PRKCH-209ENST00000553889 ABCC6O95255 1503 aa11.55□□□□□ -0.56
PRKCH-209ENST00000553889 FOXO3O43524 673 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 SNX21Q969T3 373 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 ANTXR1Q9H6X2 564 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 LTN1O94822 1766 aa11.54□□□□□ -0.56
PRKCH-209ENST00000553889 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
PRKCH-209ENST00000553889 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-209ENST00000553889 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
PRKCH-209ENST00000553889 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
PRKCH-209ENST00000553889 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
PRKCH-209ENST00000553889 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
PRKCH-209ENST00000553889 ARHGEF25Q86VW2 580 aa11.53□□□□□ -0.56
PRKCH-209ENST00000553889 LMO7Q8WWI1 1683 aa11.52□□□□□ -0.56
PRKCH-209ENST00000553889 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.56
PRKCH-209ENST00000553889 HMMRO75330 724 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 KCNA4P22459 653 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
PRKCH-209ENST00000553889 NBR1Q14596 966 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 LNPKQ9C0E8 428 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 OSBPL3Q9H4L5 887 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.57
PRKCH-209ENST00000553889 GNAI3P08754 354 aa11.51□□□□□ -0.57
PRKCH-209ENST00000553889 PSME1Q06323 249 aa11.51□□□□□ -0.57
PRKCH-209ENST00000553889 KRT24Q2M2I5 525 aa11.51□□□□□ -0.57
PRKCH-209ENST00000553889 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
PRKCH-209ENST00000553889 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
PRKCH-209ENST00000553889 KDM3BQ7LBC6 1761 aa11.5□□□□□ -0.57
PRKCH-209ENST00000553889 SLC4A3P48751 1232 aa11.5□□□□□ -0.57
PRKCH-209ENST00000553889 C19orf44Q9H6X5 657 aa11.5□□□□□ -0.57
PRKCH-209ENST00000553889 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
PRKCH-209ENST00000553889 C1orf167Q5SNV9 1468 aa11.5□□□□□ -0.57
PRKCH-209ENST00000553889 CDC45O75419 566 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 GCP02774 474 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 FLIIQ13045 1269 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 AKAP4Q5JQC9 854 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
PRKCH-209ENST00000553889 PLEKHO1Q53GL0 409 aaPredicted RBP11.48□□□□□ -0.57
PRKCH-209ENST00000553889 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
PRKCH-209ENST00000553889 MEIS3Q99687 375 aa11.48□□□□□ -0.57
PRKCH-209ENST00000553889 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
PRKCH-209ENST00000553889 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
PRKCH-209ENST00000553889 SOX12O15370 315 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms