RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
SNRPF-205ENST00000553192 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
SNRPF-205ENST00000553192 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
SNRPF-205ENST00000553192 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
SNRPF-205ENST00000553192 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
SNRPF-205ENST00000553192 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
SNRPF-205ENST00000553192 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
SNRPF-205ENST00000553192 PCNTO95613 3336 aa17.22■□□□□ 0.35
SNRPF-205ENST00000553192 RBM46Q8TBY0 533 aaKnown RBP17.22■□□□□ 0.35
SNRPF-205ENST00000553192 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
SNRPF-205ENST00000553192 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
SNRPF-205ENST00000553192 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
SNRPF-205ENST00000553192 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
SNRPF-205ENST00000553192 DOT1LQ8TEK3 1739 aa17.17■□□□□ 0.34
SNRPF-205ENST00000553192 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
SNRPF-205ENST00000553192 HSPA1AP0DMV8 641 aaKnown RBP17.16■□□□□ 0.34
SNRPF-205ENST00000553192 HSPA1BP0DMV9 641 aaKnown RBP17.16■□□□□ 0.34
SNRPF-205ENST00000553192 FSTL1Q12841 308 aa17.16■□□□□ 0.34
SNRPF-205ENST00000553192 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
SNRPF-205ENST00000553192 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
SNRPF-205ENST00000553192 USP47Q96K76 1375 aa17.15■□□□□ 0.34
SNRPF-205ENST00000553192 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
SNRPF-205ENST00000553192 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
SNRPF-205ENST00000553192 C5P01031 1676 aa17.12■□□□□ 0.33
SNRPF-205ENST00000553192 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
SNRPF-205ENST00000553192 TOGARAM1Q9Y4F4 1720 aa17.11■□□□□ 0.33
SNRPF-205ENST00000553192 NME9Q86XW9 330 aa17.11■□□□□ 0.33
SNRPF-205ENST00000553192 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
SNRPF-205ENST00000553192 KTN1Q86UP2 1357 aaKnown RBP17.11■□□□□ 0.33
SNRPF-205ENST00000553192 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
SNRPF-205ENST00000553192 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
SNRPF-205ENST00000553192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNRPF-205ENST00000553192 ZCRB1Q8TBF4 217 aaKnown RBP17.09■□□□□ 0.33
SNRPF-205ENST00000553192 BCS1LQ9Y276 419 aa17.09■□□□□ 0.33
SNRPF-205ENST00000553192 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
SNRPF-205ENST00000553192 LTN1O94822 1766 aa17.09■□□□□ 0.33
SNRPF-205ENST00000553192 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
SNRPF-205ENST00000553192 MEGF6O75095 1541 aa17.08■□□□□ 0.32
SNRPF-205ENST00000553192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
SNRPF-205ENST00000553192 PHF14O94880 888 aa17.08■□□□□ 0.32
SNRPF-205ENST00000553192 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.32
SNRPF-205ENST00000553192 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
SNRPF-205ENST00000553192 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
SNRPF-205ENST00000553192 IP6K1Q92551 441 aa17.07■□□□□ 0.32
SNRPF-205ENST00000553192 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 C10orf71Q711Q0 1435 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 AK7Q96M32 723 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 PCDH10Q9P2E7 1040 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 C4BP0C0L5 1744 aa17.06■□□□□ 0.32
SNRPF-205ENST00000553192 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
SNRPF-205ENST00000553192 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
SNRPF-205ENST00000553192 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
SNRPF-205ENST00000553192 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
SNRPF-205ENST00000553192 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 TGFB2P61812 414 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 SMC1BQ8NDV3 1235 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 MON2Q7Z3U7 1717 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
SNRPF-205ENST00000553192 MMP10P09238 476 aa17.02■□□□□ 0.32
SNRPF-205ENST00000553192 SSFA2P28290 1259 aa17.02■□□□□ 0.32
SNRPF-205ENST00000553192 KDM2BQ8NHM5 1336 aa17.01■□□□□ 0.31
SNRPF-205ENST00000553192 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
SNRPF-205ENST00000553192 DPEP1P16444 411 aa17.01■□□□□ 0.31
SNRPF-205ENST00000553192 HMGB2P26583 209 aaKnown RBP17.01■□□□□ 0.31
SNRPF-205ENST00000553192 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
SNRPF-205ENST00000553192 FCHSD2O94868 740 aa17■□□□□ 0.31
SNRPF-205ENST00000553192 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
SNRPF-205ENST00000553192 KCNA3P22001 575 aa16.99■□□□□ 0.31
SNRPF-205ENST00000553192 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
SNRPF-205ENST00000553192 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
SNRPF-205ENST00000553192 HOXC9P31274 260 aa16.97■□□□□ 0.31
SNRPF-205ENST00000553192 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
SNRPF-205ENST00000553192 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
SNRPF-205ENST00000553192 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
SNRPF-205ENST00000553192 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
SNRPF-205ENST00000553192 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
SNRPF-205ENST00000553192 FBLN1P23142 703 aa16.95■□□□□ 0.3
SNRPF-205ENST00000553192 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
SNRPF-205ENST00000553192 USHBP1Q8N6Y0 703 aa16.95■□□□□ 0.3
SNRPF-205ENST00000553192 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
SNRPF-205ENST00000553192 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
SNRPF-205ENST00000553192 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 GNPATO15228 680 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 FOXN1O15353 648 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 ITPK1Q13572 414 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 PIGBQ92521 554 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
SNRPF-205ENST00000553192 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
SNRPF-205ENST00000553192 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
SNRPF-205ENST00000553192 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
SNRPF-205ENST00000553192 CYP27B1O15528 508 aa16.93■□□□□ 0.3
SNRPF-205ENST00000553192 SIK1P57059 783 aa16.93■□□□□ 0.3
SNRPF-205ENST00000553192 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
SNRPF-205ENST00000553192 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
SNRPF-205ENST00000553192 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
SNRPF-205ENST00000553192 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
SNRPF-205ENST00000553192 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
SNRPF-205ENST00000553192 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms